ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02366:02334

Extra

PDB:
ATOM 1 O3' G A2365 57.446 109.939 124.179 1.00 41.42 O
ATOM 2 P G A2366 56.766 110.191 122.744 1.00 43.16 P
ATOM 3 OP1 G A2366 55.959 111.434 122.861 1.00 41.49 O
ATOM 4 OP2 G A2366 56.122 108.941 122.261 1.00 43.56 O
ATOM 5 O5' G A2366 57.998 110.481 121.789 1.00 44.49 O
ATOM 6 C5' G A2366 58.996 111.441 122.152 1.00 43.28 C
ATOM 7 C4' G A2366 60.209 111.248 121.291 1.00 44.57 C
ATOM 8 O4' G A2366 60.727 109.902 121.515 1.00 42.62 O
ATOM 9 C3' G A2366 59.945 111.369 119.791 1.00 44.98 C
ATOM 10 O3' G A2366 61.087 111.929 119.151 1.00 50.82 O
ATOM 11 C2' G A2366 59.770 109.914 119.365 1.00 44.63 C
ATOM 12 O2' G A2366 60.088 109.686 118.004 1.00 46.32 O
ATOM 13 C1' G A2366 60.756 109.191 120.291 1.00 42.83 C
ATOM 14 N9 G A2366 60.359 107.811 120.555 1.00 39.09 N
ATOM 15 C8 G A2366 59.092 107.383 120.868 1.00 38.74 C
ATOM 16 N7 G A2366 59.005 106.091 121.007 1.00 38.18 N
ATOM 17 C5 G A2366 60.293 105.630 120.784 1.00 38.64 C
ATOM 18 C6 G A2366 60.802 104.304 120.789 1.00 37.85 C
ATOM 19 O6 G A2366 60.188 103.247 120.969 1.00 40.39 O
ATOM 20 N1 G A2366 62.170 104.279 120.541 1.00 36.91 N
ATOM 21 C2 G A2366 62.949 105.383 120.314 1.00 36.85 C
ATOM 22 N2 G A2366 64.249 105.140 120.143 1.00 36.14 N
ATOM 23 N3 G A2366 62.483 106.631 120.273 1.00 38.61 N
ATOM 24 C4 G A2366 61.151 106.679 120.519 1.00 38.52 C
ATOM 25 P C A2367 61.245 113.524 119.042 1.00 52.85 P
ATOM 26 OP1 C A2367 60.466 114.180 120.127 1.00 51.54 O
ATOM 27 OP2 C A2367 60.986 113.901 117.635 1.00 54.25 O
ATOM 28 O5' C A2367 62.801 113.744 119.307 1.00 58.39 O
TER

ATOM 1 O3' U B2333 58.625 98.752 116.259 1.00 40.78 O
ATOM 2 P C B2334 58.445 98.855 117.860 1.00 42.51 P
ATOM 3 OP1 C B2334 57.885 97.546 118.286 1.00 40.50 O
ATOM 4 OP2 C B2334 57.728 100.107 118.214 1.00 38.92 O
ATOM 5 O5' C B2334 59.931 98.987 118.417 1.00 40.61 O
ATOM 6 C5' C B2334 60.976 98.145 117.928 1.00 39.40 C
ATOM 7 C4' C B2334 62.319 98.747 118.253 1.00 41.02 C
ATOM 8 O4' C B2334 62.523 99.936 117.435 1.00 41.37 O
ATOM 9 C3' C B2334 62.511 99.198 119.707 1.00 41.92 C
ATOM 10 O3' C B2334 63.847 98.927 120.116 1.00 42.34 O
ATOM 11 C2' C B2334 62.366 100.713 119.594 1.00 42.80 C
ATOM 12 O2' C B2334 62.987 101.471 120.616 1.00 41.42 O
ATOM 13 C1' C B2334 63.051 100.950 118.253 1.00 42.86 C
ATOM 14 N1 C B2334 62.813 102.281 117.661 1.00 43.20 N
ATOM 15 C2 C B2334 61.510 102.821 117.645 1.00 44.22 C
ATOM 16 O2 C B2334 60.542 102.092 117.954 1.00 42.56 O
ATOM 17 N3 C B2334 61.347 104.119 117.284 1.00 43.34 N
ATOM 18 C4 C B2334 62.404 104.848 116.921 1.00 41.36 C
ATOM 19 N4 C B2334 62.212 106.140 116.664 1.00 41.51 N
ATOM 20 C5 C B2334 63.708 104.290 116.826 1.00 40.15 C
ATOM 21 C6 C B2334 63.866 103.016 117.196 1.00 41.68 C
ATOM 22 P G B2335 64.201 97.535 120.832 1.00 42.23 P
ATOM 23 OP1 G B2335 63.202 96.522 120.403 1.00 44.21 O
ATOM 24 OP2 G B2335 64.378 97.823 122.279 1.00 45.14 O
ATOM 25 O5' G B2335 65.619 97.165 120.203 1.00 42.41 O
TER

Atoms:
OP1: (55.959,111.434,122.861)
OP2: (56.122,108.941,122.261)
C3': (59.945,111.369,119.791)
C1': (60.756,109.191,120.291)
C5': (58.996,111.441,122.152)
O6: (60.188,103.247,120.969)
O4': (60.727,109.902,121.515)
C8: (59.092,107.383,120.868)
C2: (62.949,105.383,120.314)
C6: (60.802,104.304,120.789)
C5: (60.293,105.630,120.784)
C4: (61.151,106.679,120.519)
P: (56.766,110.191,122.744)
C4': (60.209,111.248,121.291)
C2': (59.770,109.914,119.365)
O2': (60.088,109.686,118.004)
N1: (62.170,104.279,120.541)
N2: (64.249,105.140,120.143)
N3: (62.483,106.631,120.273)
N7: (59.005,106.091,121.007)
N9: (60.359,107.811,120.555)
O5': (57.998,110.481,121.789)
O3': (61.087,111.929,119.151)
C2: (61.510,102.821,117.645)
OP1: (57.885,97.546,118.286)
OP2: (57.728,100.107,118.214)
C4: (62.404,104.848,116.921)
O5': (59.931,98.987,118.417)
C3': (62.511,99.198,119.707)
C1': (63.051,100.950,118.253)
O4': (62.523,99.936,117.435)
C5': (60.976,98.145,117.928)
P: (58.445,98.855,117.860)
O2: (60.542,102.092,117.954)
C4': (62.319,98.747,118.253)
C2': (62.366,100.713,119.594)
O2': (62.987,101.471,120.616)
N1: (62.813,102.281,117.661)
N3: (61.347,104.119,117.284)
N4: (62.212,106.140,116.664)
C6: (63.866,103.016,117.196)
C5: (63.708,104.290,116.826)
O3': (63.847,98.927,120.116)
Image (generated by PyMOL):
PyMOL image
show in jmol