Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02366:02334
Extra
PDB:
ATOM 1 O3' G A2365 57.407 111.028 124.055 1.00 41.07 O
ATOM 2 P G A2366 56.606 111.209 122.682 1.00 42.33 P
ATOM 3 OP1 G A2366 55.697 112.382 122.827 1.00 42.67 O
ATOM 4 OP2 G A2366 56.049 109.882 122.307 1.00 40.44 O
ATOM 5 O5' G A2366 57.740 111.584 121.638 1.00 41.75 O
ATOM 6 C5' G A2366 58.703 112.597 121.941 1.00 41.17 C
ATOM 7 C4' G A2366 59.938 112.390 121.110 1.00 42.49 C
ATOM 8 O4' G A2366 60.452 111.057 121.383 1.00 42.86 O
ATOM 9 C3' G A2366 59.732 112.469 119.599 1.00 42.14 C
ATOM 10 O3' G A2366 60.903 113.020 119.004 1.00 43.91 O
ATOM 11 C2' G A2366 59.562 111.001 119.211 1.00 41.29 C
ATOM 12 O2' G A2366 59.912 110.711 117.872 1.00 40.82 O
ATOM 13 C1' G A2366 60.527 110.320 120.179 1.00 42.00 C
ATOM 14 N9 G A2366 60.201 108.924 120.461 1.00 41.47 N
ATOM 15 C8 G A2366 58.980 108.412 120.828 1.00 40.09 C
ATOM 16 N7 G A2366 58.986 107.114 120.956 1.00 40.11 N
ATOM 17 C5 G A2366 60.292 106.744 120.667 1.00 41.39 C
ATOM 18 C6 G A2366 60.898 105.455 120.625 1.00 42.75 C
ATOM 19 O6 G A2366 60.379 104.348 120.838 1.00 43.66 O
ATOM 20 N1 G A2366 62.249 105.534 120.291 1.00 41.91 N
ATOM 21 C2 G A2366 62.932 106.698 120.034 1.00 42.22 C
ATOM 22 N2 G A2366 64.238 106.565 119.744 1.00 39.16 N
ATOM 23 N3 G A2366 62.377 107.905 120.061 1.00 42.97 N
ATOM 24 C4 G A2366 61.062 107.851 120.380 1.00 41.93 C
ATOM 25 P C A2367 60.999 114.604 118.734 1.00 45.53 P
ATOM 26 OP1 C A2367 60.278 115.322 119.813 1.00 45.77 O
ATOM 27 OP2 C A2367 60.635 114.876 117.322 1.00 48.50 O
ATOM 28 O5' C A2367 62.564 114.879 118.855 1.00 51.37 O
TER
ATOM 1 O3' U B2333 58.636 99.874 116.124 1.00 38.45 O
ATOM 2 P C B2334 58.555 99.990 117.727 1.00 40.08 P
ATOM 3 OP1 C B2334 58.110 98.660 118.222 1.00 37.35 O
ATOM 4 OP2 C B2334 57.788 101.210 118.093 1.00 36.65 O
ATOM 5 O5' C B2334 60.068 100.200 118.172 1.00 40.18 O
ATOM 6 C5' C B2334 61.093 99.287 117.743 1.00 39.61 C
ATOM 7 C4' C B2334 62.453 99.844 118.074 1.00 41.28 C
ATOM 8 O4' C B2334 62.729 100.999 117.221 1.00 42.75 O
ATOM 9 C3' C B2334 62.607 100.335 119.518 1.00 41.73 C
ATOM 10 O3' C B2334 63.924 100.055 119.973 1.00 43.55 O
ATOM 11 C2' C B2334 62.468 101.845 119.357 1.00 41.92 C
ATOM 12 O2' C B2334 63.048 102.627 120.386 1.00 40.14 O
ATOM 13 C1' C B2334 63.201 102.043 118.033 1.00 41.66 C
ATOM 14 N1 C B2334 63.016 103.351 117.377 1.00 41.89 N
ATOM 15 C2 C B2334 61.732 103.951 117.322 1.00 42.94 C
ATOM 16 O2 C B2334 60.725 103.285 117.639 1.00 41.11 O
ATOM 17 N3 C B2334 61.634 105.242 116.912 1.00 42.44 N
ATOM 18 C4 C B2334 62.733 105.909 116.537 1.00 42.47 C
ATOM 19 N4 C B2334 62.613 107.207 116.244 1.00 42.59 N
ATOM 20 C5 C B2334 64.012 105.283 116.471 1.00 41.81 C
ATOM 21 C6 C B2334 64.105 104.017 116.892 1.00 41.76 C
ATOM 22 P G B2335 64.258 98.633 120.640 1.00 44.37 P
ATOM 23 OP1 G B2335 63.281 97.637 120.131 1.00 43.77 O
ATOM 24 OP2 G B2335 64.411 98.835 122.109 1.00 44.16 O
ATOM 25 O5' G B2335 65.689 98.292 120.030 1.00 45.43 O
TER
ATOM 2 P G A2366 56.606 111.209 122.682 1.00 42.33 P
ATOM 3 OP1 G A2366 55.697 112.382 122.827 1.00 42.67 O
ATOM 4 OP2 G A2366 56.049 109.882 122.307 1.00 40.44 O
ATOM 5 O5' G A2366 57.740 111.584 121.638 1.00 41.75 O
ATOM 6 C5' G A2366 58.703 112.597 121.941 1.00 41.17 C
ATOM 7 C4' G A2366 59.938 112.390 121.110 1.00 42.49 C
ATOM 8 O4' G A2366 60.452 111.057 121.383 1.00 42.86 O
ATOM 9 C3' G A2366 59.732 112.469 119.599 1.00 42.14 C
ATOM 10 O3' G A2366 60.903 113.020 119.004 1.00 43.91 O
ATOM 11 C2' G A2366 59.562 111.001 119.211 1.00 41.29 C
ATOM 12 O2' G A2366 59.912 110.711 117.872 1.00 40.82 O
ATOM 13 C1' G A2366 60.527 110.320 120.179 1.00 42.00 C
ATOM 14 N9 G A2366 60.201 108.924 120.461 1.00 41.47 N
ATOM 15 C8 G A2366 58.980 108.412 120.828 1.00 40.09 C
ATOM 16 N7 G A2366 58.986 107.114 120.956 1.00 40.11 N
ATOM 17 C5 G A2366 60.292 106.744 120.667 1.00 41.39 C
ATOM 18 C6 G A2366 60.898 105.455 120.625 1.00 42.75 C
ATOM 19 O6 G A2366 60.379 104.348 120.838 1.00 43.66 O
ATOM 20 N1 G A2366 62.249 105.534 120.291 1.00 41.91 N
ATOM 21 C2 G A2366 62.932 106.698 120.034 1.00 42.22 C
ATOM 22 N2 G A2366 64.238 106.565 119.744 1.00 39.16 N
ATOM 23 N3 G A2366 62.377 107.905 120.061 1.00 42.97 N
ATOM 24 C4 G A2366 61.062 107.851 120.380 1.00 41.93 C
ATOM 25 P C A2367 60.999 114.604 118.734 1.00 45.53 P
ATOM 26 OP1 C A2367 60.278 115.322 119.813 1.00 45.77 O
ATOM 27 OP2 C A2367 60.635 114.876 117.322 1.00 48.50 O
ATOM 28 O5' C A2367 62.564 114.879 118.855 1.00 51.37 O
TER
ATOM 1 O3' U B2333 58.636 99.874 116.124 1.00 38.45 O
ATOM 2 P C B2334 58.555 99.990 117.727 1.00 40.08 P
ATOM 3 OP1 C B2334 58.110 98.660 118.222 1.00 37.35 O
ATOM 4 OP2 C B2334 57.788 101.210 118.093 1.00 36.65 O
ATOM 5 O5' C B2334 60.068 100.200 118.172 1.00 40.18 O
ATOM 6 C5' C B2334 61.093 99.287 117.743 1.00 39.61 C
ATOM 7 C4' C B2334 62.453 99.844 118.074 1.00 41.28 C
ATOM 8 O4' C B2334 62.729 100.999 117.221 1.00 42.75 O
ATOM 9 C3' C B2334 62.607 100.335 119.518 1.00 41.73 C
ATOM 10 O3' C B2334 63.924 100.055 119.973 1.00 43.55 O
ATOM 11 C2' C B2334 62.468 101.845 119.357 1.00 41.92 C
ATOM 12 O2' C B2334 63.048 102.627 120.386 1.00 40.14 O
ATOM 13 C1' C B2334 63.201 102.043 118.033 1.00 41.66 C
ATOM 14 N1 C B2334 63.016 103.351 117.377 1.00 41.89 N
ATOM 15 C2 C B2334 61.732 103.951 117.322 1.00 42.94 C
ATOM 16 O2 C B2334 60.725 103.285 117.639 1.00 41.11 O
ATOM 17 N3 C B2334 61.634 105.242 116.912 1.00 42.44 N
ATOM 18 C4 C B2334 62.733 105.909 116.537 1.00 42.47 C
ATOM 19 N4 C B2334 62.613 107.207 116.244 1.00 42.59 N
ATOM 20 C5 C B2334 64.012 105.283 116.471 1.00 41.81 C
ATOM 21 C6 C B2334 64.105 104.017 116.892 1.00 41.76 C
ATOM 22 P G B2335 64.258 98.633 120.640 1.00 44.37 P
ATOM 23 OP1 G B2335 63.281 97.637 120.131 1.00 43.77 O
ATOM 24 OP2 G B2335 64.411 98.835 122.109 1.00 44.16 O
ATOM 25 O5' G B2335 65.689 98.292 120.030 1.00 45.43 O
TER
Atoms:
OP1: (55.697,112.382,122.827)
OP2: (56.049,109.882,122.307)
C3': (59.732,112.469,119.599)
C1': (60.527,110.320,120.179)
C5': (58.703,112.597,121.941)
O6: (60.379,104.348,120.838)
O4': (60.452,111.057,121.383)
C8: (58.980,108.412,120.828)
C2: (62.932,106.698,120.034)
C6: (60.898,105.455,120.625)
C5: (60.292,106.744,120.667)
C4: (61.062,107.851,120.380)
P: (56.606,111.209,122.682)
C4': (59.938,112.390,121.110)
C2': (59.562,111.001,119.211)
O2': (59.912,110.711,117.872)
N1: (62.249,105.534,120.291)
N2: (64.238,106.565,119.744)
N3: (62.377,107.905,120.061)
N7: (58.986,107.114,120.956)
N9: (60.201,108.924,120.461)
O5': (57.740,111.584,121.638)
O3': (60.903,113.020,119.004)
OP2: (56.049,109.882,122.307)
C3': (59.732,112.469,119.599)
C1': (60.527,110.320,120.179)
C5': (58.703,112.597,121.941)
O6: (60.379,104.348,120.838)
O4': (60.452,111.057,121.383)
C8: (58.980,108.412,120.828)
C2: (62.932,106.698,120.034)
C6: (60.898,105.455,120.625)
C5: (60.292,106.744,120.667)
C4: (61.062,107.851,120.380)
P: (56.606,111.209,122.682)
C4': (59.938,112.390,121.110)
C2': (59.562,111.001,119.211)
O2': (59.912,110.711,117.872)
N1: (62.249,105.534,120.291)
N2: (64.238,106.565,119.744)
N3: (62.377,107.905,120.061)
N7: (58.986,107.114,120.956)
N9: (60.201,108.924,120.461)
O5': (57.740,111.584,121.638)
O3': (60.903,113.020,119.004)
C2: (61.732,103.951,117.322)
OP1: (58.110,98.660,118.222)
OP2: (57.788,101.210,118.093)
C4: (62.733,105.909,116.537)
O5': (60.068,100.200,118.172)
C3': (62.607,100.335,119.518)
C1': (63.201,102.043,118.033)
O4': (62.729,100.999,117.221)
C5': (61.093,99.287,117.743)
P: (58.555,99.990,117.727)
O2: (60.725,103.285,117.639)
C4': (62.453,99.844,118.074)
C2': (62.468,101.845,119.357)
O2': (63.048,102.627,120.386)
N1: (63.016,103.351,117.377)
N3: (61.634,105.242,116.912)
N4: (62.613,107.207,116.244)
C6: (64.105,104.017,116.892)
C5: (64.012,105.283,116.471)
O3': (63.924,100.055,119.973)
OP1: (58.110,98.660,118.222)
OP2: (57.788,101.210,118.093)
C4: (62.733,105.909,116.537)
O5': (60.068,100.200,118.172)
C3': (62.607,100.335,119.518)
C1': (63.201,102.043,118.033)
O4': (62.729,100.999,117.221)
C5': (61.093,99.287,117.743)
P: (58.555,99.990,117.727)
O2: (60.725,103.285,117.639)
C4': (62.453,99.844,118.074)
C2': (62.468,101.845,119.357)
O2': (63.048,102.627,120.386)
N1: (63.016,103.351,117.377)
N3: (61.634,105.242,116.912)
N4: (62.613,107.207,116.244)
C6: (64.105,104.017,116.892)
C5: (64.012,105.283,116.471)
O3': (63.924,100.055,119.973)
Image (generated by PyMOL):