Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02681:02678
Extra
PDB:
ATOM 1 O3' A A2680 41.968 162.636 108.009 1.00 37.33 O
ATOM 2 P G A2681 41.261 163.516 109.149 1.00 38.63 P
ATOM 3 OP1 G A2681 40.523 164.551 108.391 1.00 38.87 O
ATOM 4 OP2 G A2681 42.278 163.926 110.151 1.00 38.09 O
ATOM 5 O5' G A2681 40.210 162.535 109.844 1.00 37.55 O
ATOM 6 C5' G A2681 39.112 161.982 109.094 1.00 36.92 C
ATOM 7 C4' G A2681 38.558 160.738 109.766 1.00 38.28 C
ATOM 8 O4' G A2681 39.599 159.733 109.920 1.00 38.35 O
ATOM 9 C3' G A2681 38.057 160.848 111.198 1.00 37.81 C
ATOM 10 O3' G A2681 36.783 161.470 111.307 1.00 38.31 O
ATOM 11 C2' G A2681 37.941 159.377 111.578 1.00 37.00 C
ATOM 12 O2' G A2681 36.780 158.761 111.071 1.00 39.90 O
ATOM 13 C1' G A2681 39.164 158.782 110.880 1.00 37.53 C
ATOM 14 N9 G A2681 40.207 158.536 111.868 1.00 37.89 N
ATOM 15 C8 G A2681 40.439 157.341 112.501 1.00 37.88 C
ATOM 16 N7 G A2681 41.349 157.421 113.431 1.00 37.54 N
ATOM 17 C5 G A2681 41.765 158.742 113.395 1.00 37.67 C
ATOM 18 C6 G A2681 42.717 159.414 114.186 1.00 38.69 C
ATOM 19 O6 G A2681 43.372 158.974 115.135 1.00 42.04 O
ATOM 20 N1 G A2681 42.866 160.739 113.795 1.00 39.36 N
ATOM 21 C2 G A2681 42.171 161.346 112.785 1.00 39.68 C
ATOM 22 N2 G A2681 42.502 162.622 112.540 1.00 38.29 N
ATOM 23 N3 G A2681 41.235 160.740 112.062 1.00 38.89 N
ATOM 24 C4 G A2681 41.093 159.442 112.414 1.00 38.55 C
ATOM 25 P A A2682 36.428 162.362 112.609 1.00 39.43 P
ATOM 26 OP1 A A2682 34.954 162.585 112.589 1.00 38.80 O
ATOM 27 OP2 A A2682 37.354 163.524 112.636 1.00 37.48 O
ATOM 28 O5' A A2682 36.761 161.443 113.868 1.00 37.39 O
TER
ATOM 1 O3' A B2677 46.595 161.216 121.932 1.00 39.80 O
ATOM 2 P C B2678 47.935 160.696 121.207 1.00 38.52 P
ATOM 3 OP1 C B2678 48.053 159.254 121.543 1.00 39.64 O
ATOM 4 OP2 C B2678 49.059 161.611 121.517 1.00 39.31 O
ATOM 5 O5' C B2678 47.608 160.829 119.656 1.00 38.63 O
ATOM 6 C5' C B2678 46.495 160.133 119.085 1.00 37.68 C
ATOM 7 C4' C B2678 46.183 160.684 117.719 1.00 40.79 C
ATOM 8 O4' C B2678 45.843 162.094 117.823 1.00 40.20 O
ATOM 9 C3' C B2678 47.314 160.651 116.703 1.00 39.91 C
ATOM 10 O3' C B2678 47.424 159.360 116.106 1.00 40.79 O
ATOM 11 C2' C B2678 46.855 161.708 115.710 1.00 40.62 C
ATOM 12 O2' C B2678 45.817 161.225 114.889 1.00 39.49 O
ATOM 13 C1' C B2678 46.262 162.766 116.646 1.00 41.42 C
ATOM 14 N1 C B2678 47.229 163.815 117.019 1.00 43.34 N
ATOM 15 C2 C B2678 47.496 164.858 116.109 1.00 44.97 C
ATOM 16 O2 C B2678 46.911 164.876 115.010 1.00 47.39 O
ATOM 17 N3 C B2678 48.389 165.817 116.450 1.00 44.77 N
ATOM 18 C4 C B2678 49.003 165.767 117.634 1.00 43.94 C
ATOM 19 N4 C B2678 49.871 166.734 117.927 1.00 45.52 N
ATOM 20 C5 C B2678 48.753 164.726 118.571 1.00 44.56 C
ATOM 21 C6 C B2678 47.867 163.780 118.228 1.00 44.05 C
ATOM 22 P A B2679 48.757 158.955 115.294 1.00 43.28 P
ATOM 23 OP1 A B2679 48.827 157.475 115.269 1.00 41.86 O
ATOM 24 OP2 A B2679 49.902 159.728 115.831 1.00 43.01 O
ATOM 25 O5' A B2679 48.477 159.463 113.810 1.00 39.53 O
TER
ATOM 2 P G A2681 41.261 163.516 109.149 1.00 38.63 P
ATOM 3 OP1 G A2681 40.523 164.551 108.391 1.00 38.87 O
ATOM 4 OP2 G A2681 42.278 163.926 110.151 1.00 38.09 O
ATOM 5 O5' G A2681 40.210 162.535 109.844 1.00 37.55 O
ATOM 6 C5' G A2681 39.112 161.982 109.094 1.00 36.92 C
ATOM 7 C4' G A2681 38.558 160.738 109.766 1.00 38.28 C
ATOM 8 O4' G A2681 39.599 159.733 109.920 1.00 38.35 O
ATOM 9 C3' G A2681 38.057 160.848 111.198 1.00 37.81 C
ATOM 10 O3' G A2681 36.783 161.470 111.307 1.00 38.31 O
ATOM 11 C2' G A2681 37.941 159.377 111.578 1.00 37.00 C
ATOM 12 O2' G A2681 36.780 158.761 111.071 1.00 39.90 O
ATOM 13 C1' G A2681 39.164 158.782 110.880 1.00 37.53 C
ATOM 14 N9 G A2681 40.207 158.536 111.868 1.00 37.89 N
ATOM 15 C8 G A2681 40.439 157.341 112.501 1.00 37.88 C
ATOM 16 N7 G A2681 41.349 157.421 113.431 1.00 37.54 N
ATOM 17 C5 G A2681 41.765 158.742 113.395 1.00 37.67 C
ATOM 18 C6 G A2681 42.717 159.414 114.186 1.00 38.69 C
ATOM 19 O6 G A2681 43.372 158.974 115.135 1.00 42.04 O
ATOM 20 N1 G A2681 42.866 160.739 113.795 1.00 39.36 N
ATOM 21 C2 G A2681 42.171 161.346 112.785 1.00 39.68 C
ATOM 22 N2 G A2681 42.502 162.622 112.540 1.00 38.29 N
ATOM 23 N3 G A2681 41.235 160.740 112.062 1.00 38.89 N
ATOM 24 C4 G A2681 41.093 159.442 112.414 1.00 38.55 C
ATOM 25 P A A2682 36.428 162.362 112.609 1.00 39.43 P
ATOM 26 OP1 A A2682 34.954 162.585 112.589 1.00 38.80 O
ATOM 27 OP2 A A2682 37.354 163.524 112.636 1.00 37.48 O
ATOM 28 O5' A A2682 36.761 161.443 113.868 1.00 37.39 O
TER
ATOM 1 O3' A B2677 46.595 161.216 121.932 1.00 39.80 O
ATOM 2 P C B2678 47.935 160.696 121.207 1.00 38.52 P
ATOM 3 OP1 C B2678 48.053 159.254 121.543 1.00 39.64 O
ATOM 4 OP2 C B2678 49.059 161.611 121.517 1.00 39.31 O
ATOM 5 O5' C B2678 47.608 160.829 119.656 1.00 38.63 O
ATOM 6 C5' C B2678 46.495 160.133 119.085 1.00 37.68 C
ATOM 7 C4' C B2678 46.183 160.684 117.719 1.00 40.79 C
ATOM 8 O4' C B2678 45.843 162.094 117.823 1.00 40.20 O
ATOM 9 C3' C B2678 47.314 160.651 116.703 1.00 39.91 C
ATOM 10 O3' C B2678 47.424 159.360 116.106 1.00 40.79 O
ATOM 11 C2' C B2678 46.855 161.708 115.710 1.00 40.62 C
ATOM 12 O2' C B2678 45.817 161.225 114.889 1.00 39.49 O
ATOM 13 C1' C B2678 46.262 162.766 116.646 1.00 41.42 C
ATOM 14 N1 C B2678 47.229 163.815 117.019 1.00 43.34 N
ATOM 15 C2 C B2678 47.496 164.858 116.109 1.00 44.97 C
ATOM 16 O2 C B2678 46.911 164.876 115.010 1.00 47.39 O
ATOM 17 N3 C B2678 48.389 165.817 116.450 1.00 44.77 N
ATOM 18 C4 C B2678 49.003 165.767 117.634 1.00 43.94 C
ATOM 19 N4 C B2678 49.871 166.734 117.927 1.00 45.52 N
ATOM 20 C5 C B2678 48.753 164.726 118.571 1.00 44.56 C
ATOM 21 C6 C B2678 47.867 163.780 118.228 1.00 44.05 C
ATOM 22 P A B2679 48.757 158.955 115.294 1.00 43.28 P
ATOM 23 OP1 A B2679 48.827 157.475 115.269 1.00 41.86 O
ATOM 24 OP2 A B2679 49.902 159.728 115.831 1.00 43.01 O
ATOM 25 O5' A B2679 48.477 159.463 113.810 1.00 39.53 O
TER
Atoms:
OP1: (40.523,164.551,108.391)
OP2: (42.278,163.926,110.151)
C3': (38.057,160.848,111.198)
C1': (39.164,158.782,110.880)
C5': (39.112,161.982,109.094)
O6: (43.372,158.974,115.135)
O4': (39.599,159.733,109.920)
C8: (40.439,157.341,112.501)
C2: (42.171,161.346,112.785)
C6: (42.717,159.414,114.186)
C5: (41.765,158.742,113.395)
C4: (41.093,159.442,112.414)
P: (41.261,163.516,109.149)
C4': (38.558,160.738,109.766)
C2': (37.941,159.377,111.578)
O2': (36.780,158.761,111.071)
N1: (42.866,160.739,113.795)
N2: (42.502,162.622,112.540)
N3: (41.235,160.740,112.062)
N7: (41.349,157.421,113.431)
N9: (40.207,158.536,111.868)
O5': (40.210,162.535,109.844)
O3': (36.783,161.470,111.307)
OP2: (42.278,163.926,110.151)
C3': (38.057,160.848,111.198)
C1': (39.164,158.782,110.880)
C5': (39.112,161.982,109.094)
O6: (43.372,158.974,115.135)
O4': (39.599,159.733,109.920)
C8: (40.439,157.341,112.501)
C2: (42.171,161.346,112.785)
C6: (42.717,159.414,114.186)
C5: (41.765,158.742,113.395)
C4: (41.093,159.442,112.414)
P: (41.261,163.516,109.149)
C4': (38.558,160.738,109.766)
C2': (37.941,159.377,111.578)
O2': (36.780,158.761,111.071)
N1: (42.866,160.739,113.795)
N2: (42.502,162.622,112.540)
N3: (41.235,160.740,112.062)
N7: (41.349,157.421,113.431)
N9: (40.207,158.536,111.868)
O5': (40.210,162.535,109.844)
O3': (36.783,161.470,111.307)
C2: (47.496,164.858,116.109)
OP1: (48.053,159.254,121.543)
OP2: (49.059,161.611,121.517)
C4: (49.003,165.767,117.634)
O5': (47.608,160.829,119.656)
C3': (47.314,160.651,116.703)
C1': (46.262,162.766,116.646)
O4': (45.843,162.094,117.823)
C5': (46.495,160.133,119.085)
P: (47.935,160.696,121.207)
O2: (46.911,164.876,115.010)
C4': (46.183,160.684,117.719)
C2': (46.855,161.708,115.710)
O2': (45.817,161.225,114.889)
N1: (47.229,163.815,117.019)
N3: (48.389,165.817,116.450)
N4: (49.871,166.734,117.927)
C6: (47.867,163.780,118.228)
C5: (48.753,164.726,118.571)
O3': (47.424,159.360,116.106)
OP1: (48.053,159.254,121.543)
OP2: (49.059,161.611,121.517)
C4: (49.003,165.767,117.634)
O5': (47.608,160.829,119.656)
C3': (47.314,160.651,116.703)
C1': (46.262,162.766,116.646)
O4': (45.843,162.094,117.823)
C5': (46.495,160.133,119.085)
P: (47.935,160.696,121.207)
O2: (46.911,164.876,115.010)
C4': (46.183,160.684,117.719)
C2': (46.855,161.708,115.710)
O2': (45.817,161.225,114.889)
N1: (47.229,163.815,117.019)
N3: (48.389,165.817,116.450)
N4: (49.871,166.734,117.927)
C6: (47.867,163.780,118.228)
C5: (48.753,164.726,118.571)
O3': (47.424,159.360,116.106)
Image (generated by PyMOL):