Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02366:02334
Extra
PDB:
ATOM 1 O3' G A2365 57.460 110.753 124.040 1.00 35.91 O
ATOM 2 P G A2366 56.723 110.996 122.640 1.00 37.13 P
ATOM 3 OP1 G A2366 55.890 112.217 122.769 1.00 37.75 O
ATOM 4 OP2 G A2366 56.111 109.729 122.188 1.00 36.75 O
ATOM 5 O5' G A2366 57.908 111.322 121.642 1.00 37.64 O
ATOM 6 C5' G A2366 58.892 112.299 121.979 1.00 38.86 C
ATOM 7 C4' G A2366 60.109 112.093 121.129 1.00 38.61 C
ATOM 8 O4' G A2366 60.601 110.746 121.373 1.00 39.03 O
ATOM 9 C3' G A2366 59.849 112.191 119.632 1.00 38.71 C
ATOM 10 O3' G A2366 61.000 112.737 119.000 1.00 41.88 O
ATOM 11 C2' G A2366 59.622 110.734 119.239 1.00 36.91 C
ATOM 12 O2' G A2366 59.925 110.456 117.891 1.00 35.71 O
ATOM 13 C1' G A2366 60.592 110.008 120.170 1.00 38.16 C
ATOM 14 N9 G A2366 60.208 108.630 120.473 1.00 37.56 N
ATOM 15 C8 G A2366 58.961 108.180 120.834 1.00 37.47 C
ATOM 16 N7 G A2366 58.906 106.886 120.985 1.00 37.13 N
ATOM 17 C5 G A2366 60.197 106.453 120.721 1.00 38.56 C
ATOM 18 C6 G A2366 60.742 105.138 120.713 1.00 39.86 C
ATOM 19 O6 G A2366 60.164 104.065 120.935 1.00 40.59 O
ATOM 20 N1 G A2366 62.102 105.147 120.401 1.00 39.15 N
ATOM 21 C2 G A2366 62.840 106.275 120.128 1.00 38.22 C
ATOM 22 N2 G A2366 64.134 106.081 119.855 1.00 34.23 N
ATOM 23 N3 G A2366 62.340 107.505 120.124 1.00 39.64 N
ATOM 24 C4 G A2366 61.020 107.519 120.424 1.00 38.36 C
ATOM 25 P C A2367 61.103 114.324 118.749 1.00 43.88 P
ATOM 26 OP1 C A2367 60.382 115.043 119.819 1.00 43.32 O
ATOM 27 OP2 C A2367 60.755 114.600 117.336 1.00 46.77 O
ATOM 28 O5' C A2367 62.662 114.592 118.910 1.00 48.33 O
TER
ATOM 1 O3' U B2333 58.621 99.634 116.143 1.00 36.85 O
ATOM 2 P C B2334 58.506 99.743 117.742 1.00 36.96 P
ATOM 3 OP1 C B2334 58.043 98.417 118.214 1.00 36.16 O
ATOM 4 OP2 C B2334 57.745 100.957 118.105 1.00 35.32 O
ATOM 5 O5' C B2334 60.012 99.936 118.212 1.00 36.86 O
ATOM 6 C5' C B2334 61.035 99.032 117.766 1.00 36.69 C
ATOM 7 C4' C B2334 62.394 99.589 118.091 1.00 37.97 C
ATOM 8 O4' C B2334 62.665 100.753 117.248 1.00 39.28 O
ATOM 9 C3' C B2334 62.553 100.067 119.536 1.00 38.56 C
ATOM 10 O3' C B2334 63.874 99.769 119.965 1.00 39.91 O
ATOM 11 C2' C B2334 62.401 101.580 119.388 1.00 38.14 C
ATOM 12 O2' C B2334 62.965 102.372 120.413 1.00 35.82 O
ATOM 13 C1' C B2334 63.138 101.791 118.070 1.00 38.87 C
ATOM 14 N1 C B2334 62.961 103.105 117.425 1.00 39.35 N
ATOM 15 C2 C B2334 61.681 103.688 117.346 1.00 39.76 C
ATOM 16 O2 C B2334 60.682 103.012 117.645 1.00 37.93 O
ATOM 17 N3 C B2334 61.575 104.975 116.935 1.00 40.34 N
ATOM 18 C4 C B2334 62.669 105.656 116.577 1.00 39.87 C
ATOM 19 N4 C B2334 62.531 106.945 116.264 1.00 40.15 N
ATOM 20 C5 C B2334 63.956 105.051 116.546 1.00 39.16 C
ATOM 21 C6 C B2334 64.055 103.786 116.970 1.00 38.89 C
ATOM 22 P G B2335 64.202 98.336 120.609 1.00 40.74 P
ATOM 23 OP1 G B2335 63.223 97.366 120.067 1.00 40.35 O
ATOM 24 OP2 G B2335 64.344 98.492 122.081 1.00 40.10 O
ATOM 25 O5' G B2335 65.637 98.002 120.007 1.00 41.84 O
TER
ATOM 2 P G A2366 56.723 110.996 122.640 1.00 37.13 P
ATOM 3 OP1 G A2366 55.890 112.217 122.769 1.00 37.75 O
ATOM 4 OP2 G A2366 56.111 109.729 122.188 1.00 36.75 O
ATOM 5 O5' G A2366 57.908 111.322 121.642 1.00 37.64 O
ATOM 6 C5' G A2366 58.892 112.299 121.979 1.00 38.86 C
ATOM 7 C4' G A2366 60.109 112.093 121.129 1.00 38.61 C
ATOM 8 O4' G A2366 60.601 110.746 121.373 1.00 39.03 O
ATOM 9 C3' G A2366 59.849 112.191 119.632 1.00 38.71 C
ATOM 10 O3' G A2366 61.000 112.737 119.000 1.00 41.88 O
ATOM 11 C2' G A2366 59.622 110.734 119.239 1.00 36.91 C
ATOM 12 O2' G A2366 59.925 110.456 117.891 1.00 35.71 O
ATOM 13 C1' G A2366 60.592 110.008 120.170 1.00 38.16 C
ATOM 14 N9 G A2366 60.208 108.630 120.473 1.00 37.56 N
ATOM 15 C8 G A2366 58.961 108.180 120.834 1.00 37.47 C
ATOM 16 N7 G A2366 58.906 106.886 120.985 1.00 37.13 N
ATOM 17 C5 G A2366 60.197 106.453 120.721 1.00 38.56 C
ATOM 18 C6 G A2366 60.742 105.138 120.713 1.00 39.86 C
ATOM 19 O6 G A2366 60.164 104.065 120.935 1.00 40.59 O
ATOM 20 N1 G A2366 62.102 105.147 120.401 1.00 39.15 N
ATOM 21 C2 G A2366 62.840 106.275 120.128 1.00 38.22 C
ATOM 22 N2 G A2366 64.134 106.081 119.855 1.00 34.23 N
ATOM 23 N3 G A2366 62.340 107.505 120.124 1.00 39.64 N
ATOM 24 C4 G A2366 61.020 107.519 120.424 1.00 38.36 C
ATOM 25 P C A2367 61.103 114.324 118.749 1.00 43.88 P
ATOM 26 OP1 C A2367 60.382 115.043 119.819 1.00 43.32 O
ATOM 27 OP2 C A2367 60.755 114.600 117.336 1.00 46.77 O
ATOM 28 O5' C A2367 62.662 114.592 118.910 1.00 48.33 O
TER
ATOM 1 O3' U B2333 58.621 99.634 116.143 1.00 36.85 O
ATOM 2 P C B2334 58.506 99.743 117.742 1.00 36.96 P
ATOM 3 OP1 C B2334 58.043 98.417 118.214 1.00 36.16 O
ATOM 4 OP2 C B2334 57.745 100.957 118.105 1.00 35.32 O
ATOM 5 O5' C B2334 60.012 99.936 118.212 1.00 36.86 O
ATOM 6 C5' C B2334 61.035 99.032 117.766 1.00 36.69 C
ATOM 7 C4' C B2334 62.394 99.589 118.091 1.00 37.97 C
ATOM 8 O4' C B2334 62.665 100.753 117.248 1.00 39.28 O
ATOM 9 C3' C B2334 62.553 100.067 119.536 1.00 38.56 C
ATOM 10 O3' C B2334 63.874 99.769 119.965 1.00 39.91 O
ATOM 11 C2' C B2334 62.401 101.580 119.388 1.00 38.14 C
ATOM 12 O2' C B2334 62.965 102.372 120.413 1.00 35.82 O
ATOM 13 C1' C B2334 63.138 101.791 118.070 1.00 38.87 C
ATOM 14 N1 C B2334 62.961 103.105 117.425 1.00 39.35 N
ATOM 15 C2 C B2334 61.681 103.688 117.346 1.00 39.76 C
ATOM 16 O2 C B2334 60.682 103.012 117.645 1.00 37.93 O
ATOM 17 N3 C B2334 61.575 104.975 116.935 1.00 40.34 N
ATOM 18 C4 C B2334 62.669 105.656 116.577 1.00 39.87 C
ATOM 19 N4 C B2334 62.531 106.945 116.264 1.00 40.15 N
ATOM 20 C5 C B2334 63.956 105.051 116.546 1.00 39.16 C
ATOM 21 C6 C B2334 64.055 103.786 116.970 1.00 38.89 C
ATOM 22 P G B2335 64.202 98.336 120.609 1.00 40.74 P
ATOM 23 OP1 G B2335 63.223 97.366 120.067 1.00 40.35 O
ATOM 24 OP2 G B2335 64.344 98.492 122.081 1.00 40.10 O
ATOM 25 O5' G B2335 65.637 98.002 120.007 1.00 41.84 O
TER
Atoms:
OP1: (55.890,112.217,122.769)
OP2: (56.111,109.729,122.188)
C3': (59.849,112.191,119.632)
C1': (60.592,110.008,120.170)
C5': (58.892,112.299,121.979)
O6: (60.164,104.065,120.935)
O4': (60.601,110.746,121.373)
C8: (58.961,108.180,120.834)
C2: (62.840,106.275,120.128)
C6: (60.742,105.138,120.713)
C5: (60.197,106.453,120.721)
C4: (61.020,107.519,120.424)
P: (56.723,110.996,122.640)
C4': (60.109,112.093,121.129)
C2': (59.622,110.734,119.239)
O2': (59.925,110.456,117.891)
N1: (62.102,105.147,120.401)
N2: (64.134,106.081,119.855)
N3: (62.340,107.505,120.124)
N7: (58.906,106.886,120.985)
N9: (60.208,108.630,120.473)
O5': (57.908,111.322,121.642)
O3': (61.000,112.737,119.000)
OP2: (56.111,109.729,122.188)
C3': (59.849,112.191,119.632)
C1': (60.592,110.008,120.170)
C5': (58.892,112.299,121.979)
O6: (60.164,104.065,120.935)
O4': (60.601,110.746,121.373)
C8: (58.961,108.180,120.834)
C2: (62.840,106.275,120.128)
C6: (60.742,105.138,120.713)
C5: (60.197,106.453,120.721)
C4: (61.020,107.519,120.424)
P: (56.723,110.996,122.640)
C4': (60.109,112.093,121.129)
C2': (59.622,110.734,119.239)
O2': (59.925,110.456,117.891)
N1: (62.102,105.147,120.401)
N2: (64.134,106.081,119.855)
N3: (62.340,107.505,120.124)
N7: (58.906,106.886,120.985)
N9: (60.208,108.630,120.473)
O5': (57.908,111.322,121.642)
O3': (61.000,112.737,119.000)
C2: (61.681,103.688,117.346)
OP1: (58.043,98.417,118.214)
OP2: (57.745,100.957,118.105)
C4: (62.669,105.656,116.577)
O5': (60.012,99.936,118.212)
C3': (62.553,100.067,119.536)
C1': (63.138,101.791,118.070)
O4': (62.665,100.753,117.248)
C5': (61.035,99.032,117.766)
P: (58.506,99.743,117.742)
O2: (60.682,103.012,117.645)
C4': (62.394,99.589,118.091)
C2': (62.401,101.580,119.388)
O2': (62.965,102.372,120.413)
N1: (62.961,103.105,117.425)
N3: (61.575,104.975,116.935)
N4: (62.531,106.945,116.264)
C6: (64.055,103.786,116.970)
C5: (63.956,105.051,116.546)
O3': (63.874,99.769,119.965)
OP1: (58.043,98.417,118.214)
OP2: (57.745,100.957,118.105)
C4: (62.669,105.656,116.577)
O5': (60.012,99.936,118.212)
C3': (62.553,100.067,119.536)
C1': (63.138,101.791,118.070)
O4': (62.665,100.753,117.248)
C5': (61.035,99.032,117.766)
P: (58.506,99.743,117.742)
O2: (60.682,103.012,117.645)
C4': (62.394,99.589,118.091)
C2': (62.401,101.580,119.388)
O2': (62.965,102.372,120.413)
N1: (62.961,103.105,117.425)
N3: (61.575,104.975,116.935)
N4: (62.531,106.945,116.264)
C6: (64.055,103.786,116.970)
C5: (63.956,105.051,116.546)
O3': (63.874,99.769,119.965)
Image (generated by PyMOL):