Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02366:02334
Extra
PDB:
ATOM 1 O3' G A2365 57.588 111.173 124.365 1.00 43.63 O
ATOM 2 P G A2366 56.877 111.363 122.950 1.00 44.61 P
ATOM 3 OP1 G A2366 56.065 112.599 123.060 1.00 45.19 O
ATOM 4 OP2 G A2366 56.239 110.082 122.570 1.00 42.59 O
ATOM 5 O5' G A2366 58.076 111.644 121.950 1.00 45.57 O
ATOM 6 C5' G A2366 59.054 112.636 122.264 1.00 46.84 C
ATOM 7 C4' G A2366 60.283 112.421 121.435 1.00 47.21 C
ATOM 8 O4' G A2366 60.766 111.073 121.690 1.00 48.69 O
ATOM 9 C3' G A2366 60.068 112.526 119.933 1.00 47.92 C
ATOM 10 O3' G A2366 61.232 113.097 119.337 1.00 51.37 O
ATOM 11 C2' G A2366 59.874 111.066 119.523 1.00 46.81 C
ATOM 12 O2' G A2366 60.227 110.805 118.181 1.00 45.95 O
ATOM 13 C1' G A2366 60.824 110.347 120.480 1.00 47.20 C
ATOM 14 N9 G A2366 60.467 108.956 120.760 1.00 45.47 N
ATOM 15 C8 G A2366 59.226 108.478 121.092 1.00 45.50 C
ATOM 16 N7 G A2366 59.201 107.184 121.256 1.00 45.49 N
ATOM 17 C5 G A2366 60.508 106.780 121.027 1.00 45.87 C
ATOM 18 C6 G A2366 61.091 105.477 121.060 1.00 47.49 C
ATOM 19 O6 G A2366 60.541 104.387 121.301 1.00 47.91 O
ATOM 20 N1 G A2366 62.455 105.520 120.773 1.00 45.26 N
ATOM 21 C2 G A2366 63.161 106.658 120.494 1.00 44.23 C
ATOM 22 N2 G A2366 64.452 106.493 120.243 1.00 43.44 N
ATOM 23 N3 G A2366 62.633 107.873 120.461 1.00 46.07 N
ATOM 24 C4 G A2366 61.308 107.860 120.732 1.00 45.67 C
ATOM 25 P C A2367 61.296 114.685 119.052 1.00 51.71 P
ATOM 26 OP1 C A2367 60.605 115.396 120.146 1.00 52.00 O
ATOM 27 OP2 C A2367 60.895 114.947 117.656 1.00 53.30 O
ATOM 28 O5' C A2367 62.854 114.994 119.126 1.00 55.91 O
TER
ATOM 1 O3' U B2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 2 P C B2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C B2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C B2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C B2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C B2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C B2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C B2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C B2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C B2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C B2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C B2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C B2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C B2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C B2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C B2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C B2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C B2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C B2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C B2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C B2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G B2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G B2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G B2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G B2335 65.792 98.362 120.318 1.00 47.29 O
TER
ATOM 2 P G A2366 56.877 111.363 122.950 1.00 44.61 P
ATOM 3 OP1 G A2366 56.065 112.599 123.060 1.00 45.19 O
ATOM 4 OP2 G A2366 56.239 110.082 122.570 1.00 42.59 O
ATOM 5 O5' G A2366 58.076 111.644 121.950 1.00 45.57 O
ATOM 6 C5' G A2366 59.054 112.636 122.264 1.00 46.84 C
ATOM 7 C4' G A2366 60.283 112.421 121.435 1.00 47.21 C
ATOM 8 O4' G A2366 60.766 111.073 121.690 1.00 48.69 O
ATOM 9 C3' G A2366 60.068 112.526 119.933 1.00 47.92 C
ATOM 10 O3' G A2366 61.232 113.097 119.337 1.00 51.37 O
ATOM 11 C2' G A2366 59.874 111.066 119.523 1.00 46.81 C
ATOM 12 O2' G A2366 60.227 110.805 118.181 1.00 45.95 O
ATOM 13 C1' G A2366 60.824 110.347 120.480 1.00 47.20 C
ATOM 14 N9 G A2366 60.467 108.956 120.760 1.00 45.47 N
ATOM 15 C8 G A2366 59.226 108.478 121.092 1.00 45.50 C
ATOM 16 N7 G A2366 59.201 107.184 121.256 1.00 45.49 N
ATOM 17 C5 G A2366 60.508 106.780 121.027 1.00 45.87 C
ATOM 18 C6 G A2366 61.091 105.477 121.060 1.00 47.49 C
ATOM 19 O6 G A2366 60.541 104.387 121.301 1.00 47.91 O
ATOM 20 N1 G A2366 62.455 105.520 120.773 1.00 45.26 N
ATOM 21 C2 G A2366 63.161 106.658 120.494 1.00 44.23 C
ATOM 22 N2 G A2366 64.452 106.493 120.243 1.00 43.44 N
ATOM 23 N3 G A2366 62.633 107.873 120.461 1.00 46.07 N
ATOM 24 C4 G A2366 61.308 107.860 120.732 1.00 45.67 C
ATOM 25 P C A2367 61.296 114.685 119.052 1.00 51.71 P
ATOM 26 OP1 C A2367 60.605 115.396 120.146 1.00 52.00 O
ATOM 27 OP2 C A2367 60.895 114.947 117.656 1.00 53.30 O
ATOM 28 O5' C A2367 62.854 114.994 119.126 1.00 55.91 O
TER
ATOM 1 O3' U B2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 2 P C B2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C B2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C B2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C B2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C B2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C B2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C B2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C B2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C B2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C B2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C B2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C B2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C B2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C B2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C B2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C B2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C B2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C B2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C B2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C B2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G B2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G B2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G B2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G B2335 65.792 98.362 120.318 1.00 47.29 O
TER
Atoms:
OP1: (56.065,112.599,123.060)
OP2: (56.239,110.082,122.570)
C3': (60.068,112.526,119.933)
C1': (60.824,110.347,120.480)
C5': (59.054,112.636,122.264)
O6: (60.541,104.387,121.301)
O4': (60.766,111.073,121.690)
C8: (59.226,108.478,121.092)
C2: (63.161,106.658,120.494)
C6: (61.091,105.477,121.060)
C5: (60.508,106.780,121.027)
C4: (61.308,107.860,120.732)
P: (56.877,111.363,122.950)
C4': (60.283,112.421,121.435)
C2': (59.874,111.066,119.523)
O2': (60.227,110.805,118.181)
N1: (62.455,105.520,120.773)
N2: (64.452,106.493,120.243)
N3: (62.633,107.873,120.461)
N7: (59.201,107.184,121.256)
N9: (60.467,108.956,120.760)
O5': (58.076,111.644,121.950)
O3': (61.232,113.097,119.337)
OP2: (56.239,110.082,122.570)
C3': (60.068,112.526,119.933)
C1': (60.824,110.347,120.480)
C5': (59.054,112.636,122.264)
O6: (60.541,104.387,121.301)
O4': (60.766,111.073,121.690)
C8: (59.226,108.478,121.092)
C2: (63.161,106.658,120.494)
C6: (61.091,105.477,121.060)
C5: (60.508,106.780,121.027)
C4: (61.308,107.860,120.732)
P: (56.877,111.363,122.950)
C4': (60.283,112.421,121.435)
C2': (59.874,111.066,119.523)
O2': (60.227,110.805,118.181)
N1: (62.455,105.520,120.773)
N2: (64.452,106.493,120.243)
N3: (62.633,107.873,120.461)
N7: (59.201,107.184,121.256)
N9: (60.467,108.956,120.760)
O5': (58.076,111.644,121.950)
O3': (61.232,113.097,119.337)
C2: (61.950,104.003,117.763)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
Image (generated by PyMOL):