Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02366:02334
Extra
PDB:
ATOM 1 O3' G A2365 57.470 110.979 124.027 1.00 42.47 O
ATOM 2 P G A2366 56.775 111.207 122.605 1.00 43.53 P
ATOM 3 OP1 G A2366 56.006 112.479 122.662 1.00 42.38 O
ATOM 4 OP2 G A2366 56.095 109.946 122.216 1.00 41.82 O
ATOM 5 O5' G A2366 58.005 111.411 121.625 1.00 43.71 O
ATOM 6 C5' G A2366 58.995 112.403 121.899 1.00 43.26 C
ATOM 7 C4' G A2366 60.165 112.207 120.987 1.00 43.94 C
ATOM 8 O4' G A2366 60.690 110.874 121.221 1.00 44.65 O
ATOM 9 C3' G A2366 59.853 112.295 119.498 1.00 45.37 C
ATOM 10 O3' G A2366 60.963 112.883 118.830 1.00 49.64 O
ATOM 11 C2' G A2366 59.662 110.829 119.106 1.00 44.19 C
ATOM 12 O2' G A2366 59.964 110.550 117.752 1.00 43.80 O
ATOM 13 C1' G A2366 60.655 110.122 120.027 1.00 43.97 C
ATOM 14 N9 G A2366 60.248 108.760 120.365 1.00 43.73 N
ATOM 15 C8 G A2366 58.991 108.350 120.729 1.00 44.45 C
ATOM 16 N7 G A2366 58.910 107.066 120.935 1.00 45.03 N
ATOM 17 C5 G A2366 60.192 106.597 120.706 1.00 45.13 C
ATOM 18 C6 G A2366 60.710 105.277 120.773 1.00 46.63 C
ATOM 19 O6 G A2366 60.111 104.224 121.064 1.00 45.60 O
ATOM 20 N1 G A2366 62.070 105.247 120.462 1.00 46.65 N
ATOM 21 C2 G A2366 62.830 106.344 120.139 1.00 44.70 C
ATOM 22 N2 G A2366 64.119 106.112 119.878 1.00 42.37 N
ATOM 23 N3 G A2366 62.356 107.579 120.077 1.00 45.59 N
ATOM 24 C4 G A2366 61.037 107.631 120.366 1.00 44.65 C
ATOM 25 P C A2367 61.068 114.484 118.715 1.00 50.23 P
ATOM 26 OP1 C A2367 60.327 115.093 119.843 1.00 49.61 O
ATOM 27 OP2 C A2367 60.715 114.858 117.330 1.00 51.63 O
ATOM 28 O5' C A2367 62.624 114.764 118.906 1.00 54.72 O
TER
ATOM 1 O3' U B2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 2 P C B2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C B2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C B2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C B2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C B2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C B2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C B2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C B2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C B2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C B2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C B2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C B2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C B2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C B2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C B2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C B2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C B2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C B2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C B2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C B2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G B2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G B2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G B2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G B2335 65.656 98.229 120.117 1.00 45.02 O
TER
ATOM 2 P G A2366 56.775 111.207 122.605 1.00 43.53 P
ATOM 3 OP1 G A2366 56.006 112.479 122.662 1.00 42.38 O
ATOM 4 OP2 G A2366 56.095 109.946 122.216 1.00 41.82 O
ATOM 5 O5' G A2366 58.005 111.411 121.625 1.00 43.71 O
ATOM 6 C5' G A2366 58.995 112.403 121.899 1.00 43.26 C
ATOM 7 C4' G A2366 60.165 112.207 120.987 1.00 43.94 C
ATOM 8 O4' G A2366 60.690 110.874 121.221 1.00 44.65 O
ATOM 9 C3' G A2366 59.853 112.295 119.498 1.00 45.37 C
ATOM 10 O3' G A2366 60.963 112.883 118.830 1.00 49.64 O
ATOM 11 C2' G A2366 59.662 110.829 119.106 1.00 44.19 C
ATOM 12 O2' G A2366 59.964 110.550 117.752 1.00 43.80 O
ATOM 13 C1' G A2366 60.655 110.122 120.027 1.00 43.97 C
ATOM 14 N9 G A2366 60.248 108.760 120.365 1.00 43.73 N
ATOM 15 C8 G A2366 58.991 108.350 120.729 1.00 44.45 C
ATOM 16 N7 G A2366 58.910 107.066 120.935 1.00 45.03 N
ATOM 17 C5 G A2366 60.192 106.597 120.706 1.00 45.13 C
ATOM 18 C6 G A2366 60.710 105.277 120.773 1.00 46.63 C
ATOM 19 O6 G A2366 60.111 104.224 121.064 1.00 45.60 O
ATOM 20 N1 G A2366 62.070 105.247 120.462 1.00 46.65 N
ATOM 21 C2 G A2366 62.830 106.344 120.139 1.00 44.70 C
ATOM 22 N2 G A2366 64.119 106.112 119.878 1.00 42.37 N
ATOM 23 N3 G A2366 62.356 107.579 120.077 1.00 45.59 N
ATOM 24 C4 G A2366 61.037 107.631 120.366 1.00 44.65 C
ATOM 25 P C A2367 61.068 114.484 118.715 1.00 50.23 P
ATOM 26 OP1 C A2367 60.327 115.093 119.843 1.00 49.61 O
ATOM 27 OP2 C A2367 60.715 114.858 117.330 1.00 51.63 O
ATOM 28 O5' C A2367 62.624 114.764 118.906 1.00 54.72 O
TER
ATOM 1 O3' U B2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 2 P C B2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C B2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C B2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C B2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C B2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C B2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C B2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C B2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C B2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C B2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C B2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C B2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C B2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C B2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C B2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C B2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C B2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C B2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C B2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C B2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G B2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G B2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G B2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G B2335 65.656 98.229 120.117 1.00 45.02 O
TER
Atoms:
OP1: (56.006,112.479,122.662)
OP2: (56.095,109.946,122.216)
C3': (59.853,112.295,119.498)
C1': (60.655,110.122,120.027)
C5': (58.995,112.403,121.899)
O6: (60.111,104.224,121.064)
O4': (60.690,110.874,121.221)
C8: (58.991,108.350,120.729)
C2: (62.830,106.344,120.139)
C6: (60.710,105.277,120.773)
C5: (60.192,106.597,120.706)
C4: (61.037,107.631,120.366)
P: (56.775,111.207,122.605)
C4': (60.165,112.207,120.987)
C2': (59.662,110.829,119.106)
O2': (59.964,110.550,117.752)
N1: (62.070,105.247,120.462)
N2: (64.119,106.112,119.878)
N3: (62.356,107.579,120.077)
N7: (58.910,107.066,120.935)
N9: (60.248,108.760,120.365)
O5': (58.005,111.411,121.625)
O3': (60.963,112.883,118.830)
OP2: (56.095,109.946,122.216)
C3': (59.853,112.295,119.498)
C1': (60.655,110.122,120.027)
C5': (58.995,112.403,121.899)
O6: (60.111,104.224,121.064)
O4': (60.690,110.874,121.221)
C8: (58.991,108.350,120.729)
C2: (62.830,106.344,120.139)
C6: (60.710,105.277,120.773)
C5: (60.192,106.597,120.706)
C4: (61.037,107.631,120.366)
P: (56.775,111.207,122.605)
C4': (60.165,112.207,120.987)
C2': (59.662,110.829,119.106)
O2': (59.964,110.550,117.752)
N1: (62.070,105.247,120.462)
N2: (64.119,106.112,119.878)
N3: (62.356,107.579,120.077)
N7: (58.910,107.066,120.935)
N9: (60.248,108.760,120.365)
O5': (58.005,111.411,121.625)
O3': (60.963,112.883,118.830)
C2: (61.690,103.942,117.405)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
Image (generated by PyMOL):