ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUS:A33:A11

Extra

PDB:
ATOM 1 O3' U A 32 -5.766 -17.416 9.995 1.00 61.22 O
ATOM 2 P G A 33 -4.415 -16.854 10.600 1.00 59.75 P
ATOM 3 OP1 G A 33 -3.367 -16.767 9.561 1.00 62.27 O
ATOM 4 OP2 G A 33 -4.133 -17.614 11.833 1.00 62.18 O
ATOM 5 O5' G A 33 -4.928 -15.400 11.023 1.00 60.55 O
ATOM 6 C5' G A 33 -5.988 -15.223 11.970 1.00 58.79 C
ATOM 7 C4' G A 33 -6.547 -13.817 11.896 1.00 58.47 C
ATOM 8 O4' G A 33 -5.551 -12.877 11.440 1.00 57.09 O
ATOM 9 C3' G A 33 -7.644 -13.690 10.861 1.00 59.53 C
ATOM 10 O3' G A 33 -8.856 -14.105 11.440 1.00 59.96 O
ATOM 11 C2' G A 33 -7.646 -12.206 10.504 1.00 59.23 C
ATOM 12 O2' G A 33 -8.346 -11.440 11.465 1.00 60.36 O
ATOM 13 C1' G A 33 -6.155 -11.913 10.585 1.00 56.82 C
ATOM 14 N9 G A 33 -5.422 -11.799 9.317 1.00 56.31 N
ATOM 15 C8 G A 33 -4.374 -12.569 8.881 1.00 56.41 C
ATOM 16 N7 G A 33 -3.889 -12.218 7.724 1.00 56.41 N
ATOM 17 C5 G A 33 -4.660 -11.128 7.347 1.00 56.79 C
ATOM 18 C6 G A 33 -4.606 -10.303 6.181 1.00 56.66 C
ATOM 19 O6 G A 33 -3.839 -10.374 5.205 1.00 55.22 O
ATOM 20 N1 G A 33 -5.589 -9.304 6.230 1.00 57.08 N
ATOM 21 C2 G A 33 -6.494 -9.125 7.259 1.00 55.93 C
ATOM 22 N2 G A 33 -7.386 -8.129 7.160 1.00 56.48 N
ATOM 23 N3 G A 33 -6.534 -9.878 8.330 1.00 55.51 N
ATOM 24 C4 G A 33 -5.600 -10.857 8.325 1.00 56.71 C
ATOM 25 P A A 34 -9.830 -15.010 10.565 1.00 60.81 P
ATOM 26 OP1 A A 34 -10.913 -15.442 11.471 1.00 60.93 O
ATOM 27 OP2 A A 34 -9.017 -16.024 9.855 1.00 62.52 O
ATOM 28 O5' A A 34 -10.382 -14.011 9.440 1.00 59.47 O
TER

ATOM 1 O3' U B 10 -0.428 -7.609 4.296 1.00 54.00 O
ATOM 2 P C B 11 -0.715 -6.770 2.986 1.00 50.91 P
ATOM 3 OP1 C B 11 -0.127 -7.513 1.849 1.00 53.50 O
ATOM 4 OP2 C B 11 -0.341 -5.353 3.179 1.00 51.93 O
ATOM 5 O5' C B 11 -2.281 -6.887 2.949 1.00 50.16 O
ATOM 6 C5' C B 11 -2.909 -8.114 2.716 1.00 51.00 C
ATOM 7 C4' C B 11 -4.372 -7.923 3.043 1.00 51.32 C
ATOM 8 O4' C B 11 -4.461 -7.258 4.344 1.00 51.03 O
ATOM 9 C3' C B 11 -5.142 -7.060 2.044 1.00 52.30 C
ATOM 10 O3' C B 11 -6.478 -7.552 1.977 1.00 55.48 O
ATOM 11 C2' C B 11 -5.014 -5.726 2.752 1.00 50.86 C
ATOM 12 O2' C B 11 -5.901 -4.743 2.294 1.00 52.34 O
ATOM 13 C1' C B 11 -5.263 -6.116 4.213 1.00 49.39 C
ATOM 14 N1 C B 11 -4.843 -5.014 5.120 1.00 49.54 N
ATOM 15 C2 C B 11 -5.732 -4.429 6.065 1.00 49.31 C
ATOM 16 O2 C B 11 -6.895 -4.836 6.241 1.00 48.99 O
ATOM 17 N3 C B 11 -5.276 -3.395 6.811 1.00 47.63 N
ATOM 18 C4 C B 11 -4.044 -2.926 6.653 1.00 47.92 C
ATOM 19 N4 C B 11 -3.686 -1.905 7.433 1.00 49.22 N
ATOM 20 C5 C B 11 -3.131 -3.479 5.709 1.00 48.35 C
ATOM 21 C6 C B 11 -3.571 -4.508 4.976 1.00 49.32 C
ATOM 22 P A B 12 -7.571 -7.071 0.915 1.00 58.44 P
ATOM 23 OP1 A B 12 -6.889 -6.340 -0.189 1.00 61.03 O
ATOM 24 OP2 A B 12 -8.646 -6.447 1.708 1.00 56.82 O
ATOM 25 O5' A B 12 -8.166 -8.431 0.276 1.00 58.48 O
TER

Atoms:
OP1: (-3.367,-16.767,9.561)
OP2: (-4.133,-17.614,11.833)
C3': (-7.644,-13.690,10.861)
C1': (-6.155,-11.913,10.585)
C5': (-5.988,-15.223,11.970)
O6: (-3.839,-10.374,5.205)
O4': (-5.551,-12.877,11.440)
C8: (-4.374,-12.569,8.881)
C2: (-6.494,-9.125,7.259)
C6: (-4.606,-10.303,6.181)
C5: (-4.660,-11.128,7.347)
C4: (-5.600,-10.857,8.325)
P: (-4.415,-16.854,10.600)
C4': (-6.547,-13.817,11.896)
C2': (-7.646,-12.206,10.504)
O2': (-8.346,-11.440,11.465)
N1: (-5.589,-9.304,6.230)
N2: (-7.386,-8.129,7.160)
N3: (-6.534,-9.878,8.330)
N7: (-3.889,-12.218,7.724)
N9: (-5.422,-11.799,9.317)
O5': (-4.928,-15.400,11.023)
O3': (-8.856,-14.105,11.440)
C2: (-5.732,-4.429,6.065)
OP1: (-0.127,-7.513,1.849)
OP2: (-0.341,-5.353,3.179)
C4: (-4.044,-2.926,6.653)
O5': (-2.281,-6.887,2.949)
C3': (-5.142,-7.060,2.044)
C1': (-5.263,-6.116,4.213)
O4': (-4.461,-7.258,4.344)
C5': (-2.909,-8.114,2.716)
P: (-0.715,-6.770,2.986)
O2: (-6.895,-4.836,6.241)
C4': (-4.372,-7.923,3.043)
C2': (-5.014,-5.726,2.752)
O2': (-5.901,-4.743,2.294)
N1: (-4.843,-5.014,5.120)
N3: (-5.276,-3.395,6.811)
N4: (-3.686,-1.905,7.433)
C6: (-3.571,-4.508,4.976)
C5: (-3.131,-3.479,5.709)
O3': (-6.478,-7.552,1.977)
Image (generated by PyMOL):
PyMOL image
show in jmol