Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01965:01787
Extra
PDB:
ATOM 1 O3' A A1964 113.084 144.526 103.924 1.00 40.42 O
ATOM 2 P A A1965 111.581 145.077 103.817 1.00 41.09 P
ATOM 3 OP1 A A1965 111.457 146.322 104.617 1.00 43.50 O
ATOM 4 OP2 A A1965 110.666 143.940 104.095 1.00 42.18 O
ATOM 5 O5' A A1965 111.449 145.501 102.289 1.00 41.26 O
ATOM 6 C5' A A1965 112.057 146.708 101.800 1.00 39.23 C
ATOM 7 C4' A A1965 111.706 146.908 100.349 1.00 39.52 C
ATOM 8 O4' A A1965 112.245 145.804 99.581 1.00 40.83 O
ATOM 9 C3' A A1965 110.222 146.883 100.032 1.00 38.36 C
ATOM 10 O3' A A1965 109.611 148.140 100.250 1.00 37.59 O
ATOM 11 C2' A A1965 110.212 146.479 98.567 1.00 39.37 C
ATOM 12 O2' A A1965 110.530 147.537 97.689 1.00 38.25 O
ATOM 13 C1' A A1965 111.340 145.451 98.544 1.00 39.63 C
ATOM 14 N9 A A1965 110.853 144.100 98.820 1.00 40.39 N
ATOM 15 C8 A A1965 110.856 143.450 100.029 1.00 39.71 C
ATOM 16 N7 A A1965 110.355 142.243 99.981 1.00 41.16 N
ATOM 17 C5 A A1965 109.996 142.085 98.650 1.00 40.19 C
ATOM 18 C6 A A1965 109.408 141.019 97.954 1.00 39.13 C
ATOM 19 N6 A A1965 109.086 139.856 98.526 1.00 37.72 N
ATOM 20 N1 A A1965 109.168 141.186 96.634 1.00 37.86 N
ATOM 21 C2 A A1965 109.514 142.346 96.064 1.00 37.61 C
ATOM 22 N3 A A1965 110.080 143.417 96.611 1.00 37.88 N
ATOM 23 C4 A A1965 110.295 143.221 97.923 1.00 39.18 C
ATOM 24 P C A1966 108.088 148.199 100.739 1.00 39.25 P
ATOM 25 OP1 C A1966 107.723 149.626 100.955 1.00 39.30 O
ATOM 26 OP2 C A1966 107.932 147.230 101.850 1.00 39.06 O
ATOM 27 O5' C A1966 107.269 147.655 99.486 1.00 38.92 O
TER
ATOM 1 O3' G B1786 105.530 133.284 92.631 1.00 33.73 O
ATOM 2 P A B1787 107.107 133.011 92.476 1.00 35.98 P
ATOM 3 OP1 A B1787 107.449 132.951 91.032 1.00 34.40 O
ATOM 4 OP2 A B1787 107.451 131.871 93.347 1.00 37.03 O
ATOM 5 O5' A B1787 107.806 134.299 93.104 1.00 37.44 O
ATOM 6 C5' A B1787 107.605 135.621 92.550 1.00 35.92 C
ATOM 7 C4' A B1787 108.014 136.663 93.565 1.00 36.61 C
ATOM 8 O4' A B1787 109.469 136.759 93.615 1.00 37.33 O
ATOM 9 C3' A B1787 107.610 138.095 93.283 1.00 35.61 C
ATOM 10 O3' A B1787 106.250 138.347 93.562 1.00 35.17 O
ATOM 11 C2' A B1787 108.549 138.846 94.208 1.00 35.18 C
ATOM 12 O2' A B1787 108.186 138.718 95.564 1.00 34.44 O
ATOM 13 C1' A B1787 109.850 138.089 93.943 1.00 36.23 C
ATOM 14 N9 A B1787 110.457 138.708 92.766 1.00 37.74 N
ATOM 15 C8 A B1787 110.405 138.295 91.460 1.00 35.77 C
ATOM 16 N7 A B1787 110.907 139.160 90.616 1.00 38.61 N
ATOM 17 C5 A B1787 111.353 140.198 91.423 1.00 38.47 C
ATOM 18 C6 A B1787 111.952 141.435 91.131 1.00 37.24 C
ATOM 19 N6 A B1787 112.186 141.870 89.894 1.00 37.10 N
ATOM 20 N1 A B1787 112.289 142.227 92.168 1.00 37.86 N
ATOM 21 C2 A B1787 112.024 141.807 93.409 1.00 39.05 C
ATOM 22 N3 A B1787 111.447 140.680 93.810 1.00 39.05 N
ATOM 23 C4 A B1787 111.126 139.911 92.753 1.00 39.53 C
ATOM 24 P C B1788 105.363 139.118 92.475 1.00 34.27 P
ATOM 25 OP1 C B1788 103.969 139.158 92.976 1.00 35.24 O
ATOM 26 OP2 C B1788 105.660 138.527 91.152 1.00 32.19 O
ATOM 27 O5' C B1788 105.936 140.597 92.466 1.00 35.10 O
TER
ATOM 2 P A A1965 111.581 145.077 103.817 1.00 41.09 P
ATOM 3 OP1 A A1965 111.457 146.322 104.617 1.00 43.50 O
ATOM 4 OP2 A A1965 110.666 143.940 104.095 1.00 42.18 O
ATOM 5 O5' A A1965 111.449 145.501 102.289 1.00 41.26 O
ATOM 6 C5' A A1965 112.057 146.708 101.800 1.00 39.23 C
ATOM 7 C4' A A1965 111.706 146.908 100.349 1.00 39.52 C
ATOM 8 O4' A A1965 112.245 145.804 99.581 1.00 40.83 O
ATOM 9 C3' A A1965 110.222 146.883 100.032 1.00 38.36 C
ATOM 10 O3' A A1965 109.611 148.140 100.250 1.00 37.59 O
ATOM 11 C2' A A1965 110.212 146.479 98.567 1.00 39.37 C
ATOM 12 O2' A A1965 110.530 147.537 97.689 1.00 38.25 O
ATOM 13 C1' A A1965 111.340 145.451 98.544 1.00 39.63 C
ATOM 14 N9 A A1965 110.853 144.100 98.820 1.00 40.39 N
ATOM 15 C8 A A1965 110.856 143.450 100.029 1.00 39.71 C
ATOM 16 N7 A A1965 110.355 142.243 99.981 1.00 41.16 N
ATOM 17 C5 A A1965 109.996 142.085 98.650 1.00 40.19 C
ATOM 18 C6 A A1965 109.408 141.019 97.954 1.00 39.13 C
ATOM 19 N6 A A1965 109.086 139.856 98.526 1.00 37.72 N
ATOM 20 N1 A A1965 109.168 141.186 96.634 1.00 37.86 N
ATOM 21 C2 A A1965 109.514 142.346 96.064 1.00 37.61 C
ATOM 22 N3 A A1965 110.080 143.417 96.611 1.00 37.88 N
ATOM 23 C4 A A1965 110.295 143.221 97.923 1.00 39.18 C
ATOM 24 P C A1966 108.088 148.199 100.739 1.00 39.25 P
ATOM 25 OP1 C A1966 107.723 149.626 100.955 1.00 39.30 O
ATOM 26 OP2 C A1966 107.932 147.230 101.850 1.00 39.06 O
ATOM 27 O5' C A1966 107.269 147.655 99.486 1.00 38.92 O
TER
ATOM 1 O3' G B1786 105.530 133.284 92.631 1.00 33.73 O
ATOM 2 P A B1787 107.107 133.011 92.476 1.00 35.98 P
ATOM 3 OP1 A B1787 107.449 132.951 91.032 1.00 34.40 O
ATOM 4 OP2 A B1787 107.451 131.871 93.347 1.00 37.03 O
ATOM 5 O5' A B1787 107.806 134.299 93.104 1.00 37.44 O
ATOM 6 C5' A B1787 107.605 135.621 92.550 1.00 35.92 C
ATOM 7 C4' A B1787 108.014 136.663 93.565 1.00 36.61 C
ATOM 8 O4' A B1787 109.469 136.759 93.615 1.00 37.33 O
ATOM 9 C3' A B1787 107.610 138.095 93.283 1.00 35.61 C
ATOM 10 O3' A B1787 106.250 138.347 93.562 1.00 35.17 O
ATOM 11 C2' A B1787 108.549 138.846 94.208 1.00 35.18 C
ATOM 12 O2' A B1787 108.186 138.718 95.564 1.00 34.44 O
ATOM 13 C1' A B1787 109.850 138.089 93.943 1.00 36.23 C
ATOM 14 N9 A B1787 110.457 138.708 92.766 1.00 37.74 N
ATOM 15 C8 A B1787 110.405 138.295 91.460 1.00 35.77 C
ATOM 16 N7 A B1787 110.907 139.160 90.616 1.00 38.61 N
ATOM 17 C5 A B1787 111.353 140.198 91.423 1.00 38.47 C
ATOM 18 C6 A B1787 111.952 141.435 91.131 1.00 37.24 C
ATOM 19 N6 A B1787 112.186 141.870 89.894 1.00 37.10 N
ATOM 20 N1 A B1787 112.289 142.227 92.168 1.00 37.86 N
ATOM 21 C2 A B1787 112.024 141.807 93.409 1.00 39.05 C
ATOM 22 N3 A B1787 111.447 140.680 93.810 1.00 39.05 N
ATOM 23 C4 A B1787 111.126 139.911 92.753 1.00 39.53 C
ATOM 24 P C B1788 105.363 139.118 92.475 1.00 34.27 P
ATOM 25 OP1 C B1788 103.969 139.158 92.976 1.00 35.24 O
ATOM 26 OP2 C B1788 105.660 138.527 91.152 1.00 32.19 O
ATOM 27 O5' C B1788 105.936 140.597 92.466 1.00 35.10 O
TER
Atoms:
OP1: (111.457,146.322,104.617)
OP2: (110.666,143.940,104.095)
C3': (110.222,146.883,100.032)
C1': (111.340,145.451,98.544)
C5': (112.057,146.708,101.800)
O4': (112.245,145.804,99.581)
C8: (110.856,143.450,100.029)
O2': (110.530,147.537,97.689)
C6: (109.408,141.019,97.954)
C5: (109.996,142.085,98.650)
C4: (110.295,143.221,97.923)
P: (111.581,145.077,103.817)
C4': (111.706,146.908,100.349)
C2': (110.212,146.479,98.567)
C2: (109.514,142.346,96.064)
N1: (109.168,141.186,96.634)
N3: (110.080,143.417,96.611)
N6: (109.086,139.856,98.526)
N7: (110.355,142.243,99.981)
N9: (110.853,144.100,98.820)
O5': (111.449,145.501,102.289)
O3': (109.611,148.140,100.250)
OP2: (110.666,143.940,104.095)
C3': (110.222,146.883,100.032)
C1': (111.340,145.451,98.544)
C5': (112.057,146.708,101.800)
O4': (112.245,145.804,99.581)
C8: (110.856,143.450,100.029)
O2': (110.530,147.537,97.689)
C6: (109.408,141.019,97.954)
C5: (109.996,142.085,98.650)
C4: (110.295,143.221,97.923)
P: (111.581,145.077,103.817)
C4': (111.706,146.908,100.349)
C2': (110.212,146.479,98.567)
C2: (109.514,142.346,96.064)
N1: (109.168,141.186,96.634)
N3: (110.080,143.417,96.611)
N6: (109.086,139.856,98.526)
N7: (110.355,142.243,99.981)
N9: (110.853,144.100,98.820)
O5': (111.449,145.501,102.289)
O3': (109.611,148.140,100.250)
OP1: (107.449,132.951,91.032)
OP2: (107.451,131.871,93.347)
C3': (107.610,138.095,93.283)
C1': (109.850,138.089,93.943)
C5': (107.605,135.621,92.550)
O4': (109.469,136.759,93.615)
C8: (110.405,138.295,91.460)
O2': (108.186,138.718,95.564)
C6: (111.952,141.435,91.131)
C5: (111.353,140.198,91.423)
C4: (111.126,139.911,92.753)
P: (107.107,133.011,92.476)
C4': (108.014,136.663,93.565)
C2': (108.549,138.846,94.208)
C2: (112.024,141.807,93.409)
N1: (112.289,142.227,92.168)
N3: (111.447,140.680,93.810)
N6: (112.186,141.870,89.894)
N7: (110.907,139.160,90.616)
N9: (110.457,138.708,92.766)
O5': (107.806,134.299,93.104)
O3': (106.250,138.347,93.562)
OP2: (107.451,131.871,93.347)
C3': (107.610,138.095,93.283)
C1': (109.850,138.089,93.943)
C5': (107.605,135.621,92.550)
O4': (109.469,136.759,93.615)
C8: (110.405,138.295,91.460)
O2': (108.186,138.718,95.564)
C6: (111.952,141.435,91.131)
C5: (111.353,140.198,91.423)
C4: (111.126,139.911,92.753)
P: (107.107,133.011,92.476)
C4': (108.014,136.663,93.565)
C2': (108.549,138.846,94.208)
C2: (112.024,141.807,93.409)
N1: (112.289,142.227,92.168)
N3: (111.447,140.680,93.810)
N6: (112.186,141.870,89.894)
N7: (110.907,139.160,90.616)
N9: (110.457,138.708,92.766)
O5': (107.806,134.299,93.104)
O3': (106.250,138.347,93.562)
Image (generated by PyMOL):