ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A1334:A1340

Extra

PDB:
ATOM 1 O3' A A1333 229.245 134.128 19.866 1.00 61.04 O
ATOM 2 P U A1334 229.900 133.738 21.278 1.00 55.46 P
ATOM 3 OP1 U A1334 228.843 134.041 22.278 1.00 72.45 O
ATOM 4 OP2 U A1334 231.238 134.376 21.403 1.00 72.45 O
ATOM 5 O5' U A1334 230.093 132.163 21.210 1.00 55.46 O
ATOM 6 C5' U A1334 228.960 131.296 21.109 1.00 55.46 C
ATOM 7 C4' U A1334 229.381 129.956 20.575 1.00 55.46 C
ATOM 8 O4' U A1334 229.898 130.106 19.238 1.00 55.46 O
ATOM 9 C3' U A1334 230.514 129.286 21.335 1.00 55.46 C
ATOM 10 O3' U A1334 229.960 128.497 22.385 1.00 55.46 O
ATOM 11 C2' U A1334 231.177 128.383 20.292 1.00 55.46 C
ATOM 12 O2' U A1334 230.773 127.033 20.365 1.00 55.46 O
ATOM 13 C1' U A1334 230.730 129.002 18.964 1.00 55.46 C
ATOM 14 N1 U A1334 231.822 129.408 18.070 1.00 72.45 N
ATOM 15 C2 U A1334 232.174 128.522 17.066 1.00 72.45 C
ATOM 16 O2 U A1334 231.597 127.464 16.874 1.00 72.45 O
ATOM 17 N3 U A1334 233.229 128.918 16.295 1.00 72.45 N
ATOM 18 C4 U A1334 233.949 130.079 16.411 1.00 72.45 C
ATOM 19 O4 U A1334 234.944 130.232 15.710 1.00 72.45 O
ATOM 20 C5 U A1334 233.506 130.961 17.446 1.00 72.45 C
ATOM 21 C6 U A1334 232.484 130.604 18.223 1.00 72.45 C
ATOM 22 P C A1335 230.612 128.536 23.849 1.00 68.99 P
ATOM 23 OP1 C A1335 230.120 127.349 24.609 1.00 52.45 O
ATOM 24 OP2 C A1335 230.381 129.905 24.387 1.00 52.45 O
ATOM 25 O5' C A1335 232.163 128.317 23.580 1.00 68.99 O
TER

ATOM 1 O3' C B1339 238.142 120.304 10.779 1.00 52.47 O
ATOM 2 P A B1340 237.058 121.427 10.425 1.00 62.17 P
ATOM 3 OP1 A B1340 236.220 121.706 11.622 1.00 68.80 O
ATOM 4 OP2 A B1340 236.419 121.003 9.164 1.00 68.80 O
ATOM 5 O5' A B1340 237.916 122.728 10.126 1.00 62.17 O
ATOM 6 C5' A B1340 238.239 123.082 8.783 1.00 62.17 C
ATOM 7 C4' A B1340 238.051 124.559 8.583 1.00 62.17 C
ATOM 8 O4' A B1340 236.709 124.915 8.985 1.00 62.17 O
ATOM 9 C3' A B1340 238.997 125.452 9.371 1.00 62.17 C
ATOM 10 O3' A B1340 239.300 126.574 8.553 1.00 62.17 O
ATOM 11 C2' A B1340 238.165 125.887 10.573 1.00 62.17 C
ATOM 12 O2' A B1340 238.522 127.190 11.007 1.00 62.17 O
ATOM 13 C1' A B1340 236.751 125.903 9.991 1.00 62.17 C
ATOM 14 N9 A B1340 235.712 125.591 10.974 1.00 68.80 N
ATOM 15 C8 A B1340 234.972 124.438 11.071 1.00 68.80 C
ATOM 16 N7 A B1340 234.133 124.433 12.074 1.00 68.80 N
ATOM 17 C5 A B1340 234.328 125.667 12.676 1.00 68.80 C
ATOM 18 C6 A B1340 233.751 126.264 13.800 1.00 68.80 C
ATOM 19 N6 A B1340 232.814 125.673 14.550 1.00 68.80 N
ATOM 20 N1 A B1340 234.171 127.501 14.137 1.00 68.80 N
ATOM 21 C2 A B1340 235.103 128.081 13.390 1.00 68.80 C
ATOM 22 N3 A B1340 235.723 127.623 12.313 1.00 68.80 N
ATOM 23 C4 A B1340 235.288 126.394 12.005 1.00 68.80 C
ATOM 24 P U B1341 240.416 126.438 7.410 1.00 57.34 P
ATOM 25 OP1 U B1341 241.296 125.285 7.747 1.00 61.15 O
ATOM 26 OP2 U B1341 240.998 127.791 7.224 1.00 61.15 O
ATOM 27 O5' U B1341 239.608 126.053 6.101 1.00 57.34 O
TER

Atoms:
C4: (233.949,130.079,16.411)
N3: (233.229,128.918,16.295)
OP1: (228.843,134.041,22.278)
OP2: (231.238,134.376,21.403)
C2: (232.174,128.522,17.066)
C1': (230.730,129.002,18.964)
C3': (230.514,129.286,21.335)
O5': (230.093,132.163,21.210)
O4': (229.898,130.106,19.238)
C5': (228.960,131.296,21.109)
P: (229.900,133.738,21.278)
C4': (229.381,129.956,20.575)
C2': (231.177,128.383,20.292)
O2': (230.773,127.033,20.365)
N1: (231.822,129.408,18.070)
O4: (234.944,130.232,15.710)
O2: (231.597,127.464,16.874)
C6: (232.484,130.604,18.223)
C5: (233.506,130.961,17.446)
O3': (229.960,128.497,22.385)
OP1: (236.220,121.706,11.622)
OP2: (236.419,121.003,9.164)
C3': (238.997,125.452,9.371)
C1': (236.751,125.903,9.991)
C5': (238.239,123.082,8.783)
O4': (236.709,124.915,8.985)
C8: (234.972,124.438,11.071)
O2': (238.522,127.190,11.007)
C6: (233.751,126.264,13.800)
C5: (234.328,125.667,12.676)
C4: (235.288,126.394,12.005)
P: (237.058,121.427,10.425)
C4': (238.051,124.559,8.583)
C2': (238.165,125.887,10.573)
C2: (235.103,128.081,13.390)
N1: (234.171,127.501,14.137)
N3: (235.723,127.623,12.313)
N6: (232.814,125.673,14.550)
N7: (234.133,124.433,12.074)
N9: (235.712,125.591,10.974)
O5': (237.916,122.728,10.126)
O3': (239.300,126.574,8.553)
Image (generated by PyMOL):
PyMOL image
show in jmol