ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A204:A389

Extra

PDB:
ATOM 1 O3' A A 203 73.886 -44.139 -86.938 1.00 39.02 O
ATOM 2 P A A 204 72.800 -43.103 -86.389 1.00 54.62 P
ATOM 3 OP1 A A 204 72.453 -43.513 -85.007 1.00 59.98 O
ATOM 4 OP2 A A 204 71.729 -43.031 -87.403 1.00 50.83 O
ATOM 5 O5' A A 204 73.605 -41.736 -86.358 1.00 44.17 O
ATOM 6 C5' A A 204 74.983 -41.721 -86.073 1.00 35.59 C
ATOM 7 C4' A A 204 75.740 -40.940 -87.095 1.00 39.21 C
ATOM 8 O4' A A 204 75.162 -39.620 -87.245 1.00 45.49 O
ATOM 9 C3' A A 204 77.187 -40.658 -86.763 1.00 48.45 C
ATOM 10 O3' A A 204 78.023 -41.776 -87.000 1.00 52.38 O
ATOM 11 C2' A A 204 77.502 -39.460 -87.651 1.00 49.98 C
ATOM 12 O2' A A 204 77.794 -39.888 -88.970 1.00 46.70 O
ATOM 13 C1' A A 204 76.158 -38.712 -87.669 1.00 48.46 C
ATOM 14 N9 A A 204 76.160 -37.531 -86.778 1.00 52.37 N
ATOM 15 C8 A A 204 76.167 -37.533 -85.419 1.00 64.36 C
ATOM 16 N7 A A 204 76.189 -36.344 -84.870 1.00 66.61 N
ATOM 17 C5 A A 204 76.207 -35.486 -85.944 1.00 58.12 C
ATOM 18 C6 A A 204 76.240 -34.086 -86.005 1.00 59.30 C
ATOM 19 N6 A A 204 76.254 -33.292 -84.922 1.00 56.56 N
ATOM 20 N1 A A 204 76.259 -33.535 -87.232 1.00 52.96 N
ATOM 21 C2 A A 204 76.240 -34.344 -88.286 1.00 52.97 C
ATOM 22 N3 A A 204 76.207 -35.666 -88.338 1.00 56.55 N
ATOM 23 C4 A A 204 76.192 -36.198 -87.119 1.00 53.28 C
ATOM 24 P G A 205 79.365 -41.967 -86.153 1.00 51.89 P
ATOM 25 OP1 G A 205 79.250 -41.067 -84.968 1.00 49.17 O
ATOM 26 OP2 G A 205 80.499 -41.781 -87.077 1.00 48.89 O
ATOM 27 O5' G A 205 79.284 -43.498 -85.712 1.00 42.27 O
TER

ATOM 1 O3' U B 388 71.935 -30.113 -79.698 1.00 54.09 O
ATOM 2 P A B 389 73.355 -29.892 -79.002 1.00 57.68 P
ATOM 3 OP1 A B 389 73.557 -31.029 -78.058 1.00 66.75 O
ATOM 4 OP2 A B 389 73.372 -28.493 -78.475 1.00 51.77 O
ATOM 5 O5' A B 389 74.361 -30.027 -80.214 1.00 47.75 O
ATOM 6 C5' A B 389 74.269 -31.119 -81.105 1.00 48.71 C
ATOM 7 C4' A B 389 74.929 -30.795 -82.414 1.00 51.01 C
ATOM 8 O4' A B 389 74.225 -29.706 -83.045 1.00 53.59 O
ATOM 9 C3' A B 389 76.365 -30.303 -82.321 1.00 51.27 C
ATOM 10 O3' A B 389 77.300 -31.364 -82.239 1.00 53.40 O
ATOM 11 C2' A B 389 76.517 -29.474 -83.575 1.00 45.91 C
ATOM 12 O2' A B 389 76.711 -30.330 -84.683 1.00 54.34 O
ATOM 13 C1' A B 389 75.132 -28.862 -83.707 1.00 49.50 C
ATOM 14 N9 A B 389 75.031 -27.510 -83.130 1.00 46.11 N
ATOM 15 C8 A B 389 74.210 -27.096 -82.116 1.00 49.18 C
ATOM 16 N7 A B 389 74.288 -25.817 -81.852 1.00 48.60 N
ATOM 17 C5 A B 389 75.206 -25.355 -82.783 1.00 49.47 C
ATOM 18 C6 A B 389 75.731 -24.083 -83.032 1.00 47.70 C
ATOM 19 N6 A B 389 75.400 -22.989 -82.342 1.00 48.16 N
ATOM 20 N1 A B 389 76.621 -23.971 -84.028 1.00 49.61 N
ATOM 21 C2 A B 389 76.961 -25.059 -84.715 1.00 49.74 C
ATOM 22 N3 A B 389 76.539 -26.305 -84.579 1.00 50.53 N
ATOM 23 C4 A B 389 75.653 -26.384 -83.584 1.00 49.41 C
ATOM 24 P C B 390 78.689 -31.141 -81.490 1.00 57.58 P
ATOM 25 OP1 C B 390 79.668 -32.061 -82.117 1.00 52.66 O
ATOM 26 OP2 C B 390 78.427 -31.255 -80.022 1.00 47.36 O
ATOM 27 O5' C B 390 79.032 -29.629 -81.863 1.00 48.41 O
TER

Atoms:
OP1: (72.453,-43.513,-85.007)
OP2: (71.729,-43.031,-87.403)
C3': (77.187,-40.658,-86.763)
C1': (76.158,-38.712,-87.669)
C5': (74.983,-41.721,-86.073)
O4': (75.162,-39.620,-87.245)
C8: (76.167,-37.533,-85.419)
O2': (77.794,-39.888,-88.970)
C6: (76.240,-34.086,-86.005)
C5: (76.207,-35.486,-85.944)
C4: (76.192,-36.198,-87.119)
P: (72.800,-43.103,-86.389)
C4': (75.740,-40.940,-87.095)
C2': (77.502,-39.460,-87.651)
C2: (76.240,-34.344,-88.286)
N1: (76.259,-33.535,-87.232)
N3: (76.207,-35.666,-88.338)
N6: (76.254,-33.292,-84.922)
N7: (76.189,-36.344,-84.870)
N9: (76.160,-37.531,-86.778)
O5': (73.605,-41.736,-86.358)
O3': (78.023,-41.776,-87.000)
OP1: (73.557,-31.029,-78.058)
OP2: (73.372,-28.493,-78.475)
C3': (76.365,-30.303,-82.321)
C1': (75.132,-28.862,-83.707)
C5': (74.269,-31.119,-81.105)
O4': (74.225,-29.706,-83.045)
C8: (74.210,-27.096,-82.116)
O2': (76.711,-30.330,-84.683)
C6: (75.731,-24.083,-83.032)
C5: (75.206,-25.355,-82.783)
C4: (75.653,-26.384,-83.584)
P: (73.355,-29.892,-79.002)
C4': (74.929,-30.795,-82.414)
C2': (76.517,-29.474,-83.575)
C2: (76.961,-25.059,-84.715)
N1: (76.621,-23.971,-84.028)
N3: (76.539,-26.305,-84.579)
N6: (75.400,-22.989,-82.342)
N7: (74.288,-25.817,-81.852)
N9: (75.031,-27.510,-83.130)
O5': (74.361,-30.027,-80.214)
O3': (77.300,-31.364,-82.239)
Image (generated by PyMOL):
PyMOL image
show in jmol