Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A193:A425
Extra
PDB:
ATOM 1 O3' A A 192 67.814 100.836 20.340 1.00 52.09 O
ATOM 2 P U A 193 66.994 100.816 21.732 1.00 50.96 P
ATOM 3 OP1 U A 193 67.830 100.170 22.796 1.00 50.01 O
ATOM 4 OP2 U A 193 65.639 100.303 21.454 1.00 51.39 O
ATOM 5 O5' U A 193 66.792 102.354 22.072 1.00 50.58 O
ATOM 6 C5' U A 193 67.906 103.250 22.128 1.00 49.09 C
ATOM 7 C4' U A 193 67.426 104.610 22.544 1.00 47.92 C
ATOM 8 O4' U A 193 66.689 105.257 21.471 1.00 48.39 O
ATOM 9 C3' U A 193 66.413 104.586 23.665 1.00 47.22 C
ATOM 10 O3' U A 193 67.027 104.369 24.899 1.00 47.67 O
ATOM 11 C2' U A 193 65.781 105.955 23.545 1.00 45.63 C
ATOM 12 O2' U A 193 66.643 106.967 24.007 1.00 46.79 O
ATOM 13 C1' U A 193 65.667 106.072 22.030 1.00 45.83 C
ATOM 14 N1 U A 193 64.363 105.565 21.591 1.00 44.37 N
ATOM 15 C2 U A 193 63.286 106.416 21.717 1.00 44.35 C
ATOM 16 O2 U A 193 63.376 107.543 22.187 1.00 43.85 O
ATOM 17 N3 U A 193 62.087 105.899 21.300 1.00 43.51 N
ATOM 18 C4 U A 193 61.850 104.641 20.819 1.00 43.61 C
ATOM 19 O4 U A 193 60.689 104.269 20.679 1.00 43.96 O
ATOM 20 C5 U A 193 63.015 103.814 20.715 1.00 43.99 C
ATOM 21 C6 U A 193 64.203 104.292 21.088 1.00 43.44 C
ATOM 22 P G A 194 66.119 104.202 26.208 1.00 47.79 P
ATOM 23 OP1 G A 194 67.025 103.671 27.251 1.00 47.92 O
ATOM 24 OP2 G A 194 64.853 103.481 25.887 1.00 45.96 O
ATOM 25 O5' G A 194 65.752 105.696 26.584 1.00 45.80 O
TER
ATOM 1 O3' A B 424 55.835 115.287 19.348 1.00 52.46 O
ATOM 2 P A B 425 55.728 115.585 20.923 1.00 54.44 P
ATOM 3 OP1 A B 425 54.520 116.417 21.179 1.00 54.29 O
ATOM 4 OP2 A B 425 57.047 116.033 21.439 1.00 55.00 O
ATOM 5 O5' A B 425 55.433 114.148 21.530 1.00 53.92 O
ATOM 6 C5' A B 425 54.125 113.573 21.408 1.00 51.61 C
ATOM 7 C4' A B 425 54.098 112.224 22.054 1.00 51.11 C
ATOM 8 O4' A B 425 54.972 111.330 21.341 1.00 49.92 O
ATOM 9 C3' A B 425 54.592 112.184 23.484 1.00 50.70 C
ATOM 10 O3' A B 425 53.509 112.550 24.321 1.00 52.91 O
ATOM 11 C2' A B 425 54.971 110.719 23.635 1.00 49.69 C
ATOM 12 O2' A B 425 53.844 109.891 23.824 1.00 49.40 O
ATOM 13 C1' A B 425 55.543 110.417 22.248 1.00 48.90 C
ATOM 14 N9 A B 425 56.985 110.574 22.170 1.00 47.59 N
ATOM 15 C8 A B 425 57.717 111.724 22.317 1.00 48.00 C
ATOM 16 N7 A B 425 59.008 111.538 22.214 1.00 48.08 N
ATOM 17 C5 A B 425 59.128 110.178 21.977 1.00 46.64 C
ATOM 18 C6 A B 425 60.238 109.365 21.798 1.00 46.82 C
ATOM 19 N6 A B 425 61.487 109.823 21.831 1.00 47.48 N
ATOM 20 N1 A B 425 60.029 108.051 21.590 1.00 46.23 N
ATOM 21 C2 A B 425 58.774 107.605 21.574 1.00 46.42 C
ATOM 22 N3 A B 425 57.638 108.278 21.739 1.00 46.90 N
ATOM 23 C4 A B 425 57.893 109.576 21.941 1.00 46.56 C
ATOM 24 P C B 426 53.706 113.655 25.467 1.00 54.30 P
ATOM 25 OP1 C B 426 52.378 113.791 26.116 1.00 52.80 O
ATOM 26 OP2 C B 426 54.377 114.867 24.915 1.00 55.10 O
ATOM 27 O5' C B 426 54.686 112.928 26.489 1.00 53.87 O
TER
ATOM 2 P U A 193 66.994 100.816 21.732 1.00 50.96 P
ATOM 3 OP1 U A 193 67.830 100.170 22.796 1.00 50.01 O
ATOM 4 OP2 U A 193 65.639 100.303 21.454 1.00 51.39 O
ATOM 5 O5' U A 193 66.792 102.354 22.072 1.00 50.58 O
ATOM 6 C5' U A 193 67.906 103.250 22.128 1.00 49.09 C
ATOM 7 C4' U A 193 67.426 104.610 22.544 1.00 47.92 C
ATOM 8 O4' U A 193 66.689 105.257 21.471 1.00 48.39 O
ATOM 9 C3' U A 193 66.413 104.586 23.665 1.00 47.22 C
ATOM 10 O3' U A 193 67.027 104.369 24.899 1.00 47.67 O
ATOM 11 C2' U A 193 65.781 105.955 23.545 1.00 45.63 C
ATOM 12 O2' U A 193 66.643 106.967 24.007 1.00 46.79 O
ATOM 13 C1' U A 193 65.667 106.072 22.030 1.00 45.83 C
ATOM 14 N1 U A 193 64.363 105.565 21.591 1.00 44.37 N
ATOM 15 C2 U A 193 63.286 106.416 21.717 1.00 44.35 C
ATOM 16 O2 U A 193 63.376 107.543 22.187 1.00 43.85 O
ATOM 17 N3 U A 193 62.087 105.899 21.300 1.00 43.51 N
ATOM 18 C4 U A 193 61.850 104.641 20.819 1.00 43.61 C
ATOM 19 O4 U A 193 60.689 104.269 20.679 1.00 43.96 O
ATOM 20 C5 U A 193 63.015 103.814 20.715 1.00 43.99 C
ATOM 21 C6 U A 193 64.203 104.292 21.088 1.00 43.44 C
ATOM 22 P G A 194 66.119 104.202 26.208 1.00 47.79 P
ATOM 23 OP1 G A 194 67.025 103.671 27.251 1.00 47.92 O
ATOM 24 OP2 G A 194 64.853 103.481 25.887 1.00 45.96 O
ATOM 25 O5' G A 194 65.752 105.696 26.584 1.00 45.80 O
TER
ATOM 1 O3' A B 424 55.835 115.287 19.348 1.00 52.46 O
ATOM 2 P A B 425 55.728 115.585 20.923 1.00 54.44 P
ATOM 3 OP1 A B 425 54.520 116.417 21.179 1.00 54.29 O
ATOM 4 OP2 A B 425 57.047 116.033 21.439 1.00 55.00 O
ATOM 5 O5' A B 425 55.433 114.148 21.530 1.00 53.92 O
ATOM 6 C5' A B 425 54.125 113.573 21.408 1.00 51.61 C
ATOM 7 C4' A B 425 54.098 112.224 22.054 1.00 51.11 C
ATOM 8 O4' A B 425 54.972 111.330 21.341 1.00 49.92 O
ATOM 9 C3' A B 425 54.592 112.184 23.484 1.00 50.70 C
ATOM 10 O3' A B 425 53.509 112.550 24.321 1.00 52.91 O
ATOM 11 C2' A B 425 54.971 110.719 23.635 1.00 49.69 C
ATOM 12 O2' A B 425 53.844 109.891 23.824 1.00 49.40 O
ATOM 13 C1' A B 425 55.543 110.417 22.248 1.00 48.90 C
ATOM 14 N9 A B 425 56.985 110.574 22.170 1.00 47.59 N
ATOM 15 C8 A B 425 57.717 111.724 22.317 1.00 48.00 C
ATOM 16 N7 A B 425 59.008 111.538 22.214 1.00 48.08 N
ATOM 17 C5 A B 425 59.128 110.178 21.977 1.00 46.64 C
ATOM 18 C6 A B 425 60.238 109.365 21.798 1.00 46.82 C
ATOM 19 N6 A B 425 61.487 109.823 21.831 1.00 47.48 N
ATOM 20 N1 A B 425 60.029 108.051 21.590 1.00 46.23 N
ATOM 21 C2 A B 425 58.774 107.605 21.574 1.00 46.42 C
ATOM 22 N3 A B 425 57.638 108.278 21.739 1.00 46.90 N
ATOM 23 C4 A B 425 57.893 109.576 21.941 1.00 46.56 C
ATOM 24 P C B 426 53.706 113.655 25.467 1.00 54.30 P
ATOM 25 OP1 C B 426 52.378 113.791 26.116 1.00 52.80 O
ATOM 26 OP2 C B 426 54.377 114.867 24.915 1.00 55.10 O
ATOM 27 O5' C B 426 54.686 112.928 26.489 1.00 53.87 O
TER
Atoms:
C4: (61.850,104.641,20.819)
N3: (62.087,105.899,21.300)
OP1: (67.830,100.170,22.796)
OP2: (65.639,100.303,21.454)
C2: (63.286,106.416,21.717)
C1': (65.667,106.072,22.030)
C3': (66.413,104.586,23.665)
O5': (66.792,102.354,22.072)
O4': (66.689,105.257,21.471)
C5': (67.906,103.250,22.128)
P: (66.994,100.816,21.732)
C4': (67.426,104.610,22.544)
C2': (65.781,105.955,23.545)
O2': (66.643,106.967,24.007)
N1: (64.363,105.565,21.591)
O4: (60.689,104.269,20.679)
O2: (63.376,107.543,22.187)
C6: (64.203,104.292,21.088)
C5: (63.015,103.814,20.715)
O3': (67.027,104.369,24.899)
N3: (62.087,105.899,21.300)
OP1: (67.830,100.170,22.796)
OP2: (65.639,100.303,21.454)
C2: (63.286,106.416,21.717)
C1': (65.667,106.072,22.030)
C3': (66.413,104.586,23.665)
O5': (66.792,102.354,22.072)
O4': (66.689,105.257,21.471)
C5': (67.906,103.250,22.128)
P: (66.994,100.816,21.732)
C4': (67.426,104.610,22.544)
C2': (65.781,105.955,23.545)
O2': (66.643,106.967,24.007)
N1: (64.363,105.565,21.591)
O4: (60.689,104.269,20.679)
O2: (63.376,107.543,22.187)
C6: (64.203,104.292,21.088)
C5: (63.015,103.814,20.715)
O3': (67.027,104.369,24.899)
OP1: (54.520,116.417,21.179)
OP2: (57.047,116.033,21.439)
C3': (54.592,112.184,23.484)
C1': (55.543,110.417,22.248)
C5': (54.125,113.573,21.408)
O4': (54.972,111.330,21.341)
C8: (57.717,111.724,22.317)
O2': (53.844,109.891,23.824)
C6: (60.238,109.365,21.798)
C5: (59.128,110.178,21.977)
C4: (57.893,109.576,21.941)
P: (55.728,115.585,20.923)
C4': (54.098,112.224,22.054)
C2': (54.971,110.719,23.635)
C2: (58.774,107.605,21.574)
N1: (60.029,108.051,21.590)
N3: (57.638,108.278,21.739)
N6: (61.487,109.823,21.831)
N7: (59.008,111.538,22.214)
N9: (56.985,110.574,22.170)
O5': (55.433,114.148,21.530)
O3': (53.509,112.550,24.321)
OP2: (57.047,116.033,21.439)
C3': (54.592,112.184,23.484)
C1': (55.543,110.417,22.248)
C5': (54.125,113.573,21.408)
O4': (54.972,111.330,21.341)
C8: (57.717,111.724,22.317)
O2': (53.844,109.891,23.824)
C6: (60.238,109.365,21.798)
C5: (59.128,110.178,21.977)
C4: (57.893,109.576,21.941)
P: (55.728,115.585,20.923)
C4': (54.098,112.224,22.054)
C2': (54.971,110.719,23.635)
C2: (58.774,107.605,21.574)
N1: (60.029,108.051,21.590)
N3: (57.638,108.278,21.739)
N6: (61.487,109.823,21.831)
N7: (59.008,111.538,22.214)
N9: (56.985,110.574,22.170)
O5': (55.433,114.148,21.530)
O3': (53.509,112.550,24.321)
Image (generated by PyMOL):