Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0366:0398
Extra
PDB:
ATOM 1 O3' C A 365 92.090 101.500 5.462 1.00 61.90 O
ATOM 2 P A A 366 92.209 100.923 6.956 1.00 61.16 P
ATOM 3 OP1 A A 366 92.976 101.948 7.695 1.00 62.09 O
ATOM 4 OP2 A A 366 92.709 99.524 6.919 1.00 60.80 O
ATOM 5 O5' A A 366 90.703 100.911 7.483 1.00 59.09 O
ATOM 6 C5' A A 366 89.971 102.144 7.658 1.00 60.48 C
ATOM 7 C4' A A 366 88.537 101.860 8.049 1.00 60.62 C
ATOM 8 O4' A A 366 87.855 101.193 6.955 1.00 61.88 O
ATOM 9 C3' A A 366 88.353 100.934 9.242 1.00 59.90 C
ATOM 10 O3' A A 366 88.433 101.665 10.461 1.00 59.57 O
ATOM 11 C2' A A 366 86.964 100.359 9.004 1.00 59.62 C
ATOM 12 O2' A A 366 85.931 101.222 9.427 1.00 57.41 O
ATOM 13 C1' A A 366 86.945 100.237 7.475 1.00 61.20 C
ATOM 14 N9 A A 366 87.347 98.910 7.004 1.00 61.68 N
ATOM 15 C8 A A 366 88.615 98.447 6.731 1.00 61.10 C
ATOM 16 N7 A A 366 88.649 97.189 6.365 1.00 60.90 N
ATOM 17 C5 A A 366 87.317 96.799 6.390 1.00 62.50 C
ATOM 18 C6 A A 366 86.686 95.574 6.117 1.00 63.75 C
ATOM 19 N6 A A 366 87.342 94.471 5.746 1.00 65.07 N
ATOM 20 N1 A A 366 85.340 95.519 6.242 1.00 63.25 N
ATOM 21 C2 A A 366 84.686 96.622 6.612 1.00 62.70 C
ATOM 22 N3 A A 366 85.166 97.830 6.897 1.00 62.51 N
ATOM 23 C4 A A 366 86.504 97.851 6.768 1.00 61.93 C
ATOM 24 P G A 367 88.832 100.914 11.828 1.00 59.23 P
ATOM 25 OP1 G A 367 90.094 100.156 11.618 1.00 56.74 O
ATOM 26 OP2 G A 367 87.623 100.216 12.348 1.00 57.73 O
ATOM 27 O5' G A 367 89.160 102.115 12.817 1.00 58.36 O
TER
ATOM 1 O3' U B 397 92.478 92.439 8.678 1.00 66.13 O
ATOM 2 P A B 398 92.351 91.954 7.150 1.00 66.47 P
ATOM 3 OP1 A B 398 93.418 90.948 6.875 1.00 65.33 O
ATOM 4 OP2 A B 398 92.242 93.159 6.284 1.00 65.83 O
ATOM 5 O5' A B 398 90.931 91.233 7.122 1.00 67.88 O
ATOM 6 C5' A B 398 90.699 90.028 7.874 1.00 70.94 C
ATOM 7 C4' A B 398 89.218 89.728 7.948 1.00 73.08 C
ATOM 8 O4' A B 398 88.573 90.637 8.885 1.00 73.53 O
ATOM 9 C3' A B 398 88.443 89.843 6.638 1.00 74.01 C
ATOM 10 O3' A B 398 87.428 88.846 6.587 1.00 76.81 O
ATOM 11 C2' A B 398 87.797 91.220 6.760 1.00 74.25 C
ATOM 12 O2' A B 398 86.616 91.381 5.998 1.00 73.48 O
ATOM 13 C1' A B 398 87.474 91.256 8.250 1.00 75.13 C
ATOM 14 N9 A B 398 87.295 92.605 8.790 1.00 76.13 N
ATOM 15 C8 A B 398 88.232 93.585 9.022 1.00 76.12 C
ATOM 16 N7 A B 398 87.726 94.695 9.505 1.00 76.43 N
ATOM 17 C5 A B 398 86.366 94.428 9.599 1.00 77.43 C
ATOM 18 C6 A B 398 85.272 95.203 10.042 1.00 78.48 C
ATOM 19 N6 A B 398 85.383 96.460 10.485 1.00 77.67 N
ATOM 20 N1 A B 398 84.045 94.633 10.012 1.00 78.57 N
ATOM 21 C2 A B 398 83.933 93.373 9.563 1.00 78.36 C
ATOM 22 N3 A B 398 84.882 92.548 9.120 1.00 76.78 N
ATOM 23 C4 A B 398 86.088 93.144 9.166 1.00 76.64 C
ATOM 24 P A B 399 87.549 87.634 5.531 1.00 78.41 P
ATOM 25 OP1 A B 399 88.033 88.171 4.229 1.00 78.17 O
ATOM 26 OP2 A B 399 86.270 86.875 5.581 1.00 77.85 O
ATOM 27 O5' A B 399 88.713 86.731 6.136 1.00 77.68 O
TER
ATOM 2 P A A 366 92.209 100.923 6.956 1.00 61.16 P
ATOM 3 OP1 A A 366 92.976 101.948 7.695 1.00 62.09 O
ATOM 4 OP2 A A 366 92.709 99.524 6.919 1.00 60.80 O
ATOM 5 O5' A A 366 90.703 100.911 7.483 1.00 59.09 O
ATOM 6 C5' A A 366 89.971 102.144 7.658 1.00 60.48 C
ATOM 7 C4' A A 366 88.537 101.860 8.049 1.00 60.62 C
ATOM 8 O4' A A 366 87.855 101.193 6.955 1.00 61.88 O
ATOM 9 C3' A A 366 88.353 100.934 9.242 1.00 59.90 C
ATOM 10 O3' A A 366 88.433 101.665 10.461 1.00 59.57 O
ATOM 11 C2' A A 366 86.964 100.359 9.004 1.00 59.62 C
ATOM 12 O2' A A 366 85.931 101.222 9.427 1.00 57.41 O
ATOM 13 C1' A A 366 86.945 100.237 7.475 1.00 61.20 C
ATOM 14 N9 A A 366 87.347 98.910 7.004 1.00 61.68 N
ATOM 15 C8 A A 366 88.615 98.447 6.731 1.00 61.10 C
ATOM 16 N7 A A 366 88.649 97.189 6.365 1.00 60.90 N
ATOM 17 C5 A A 366 87.317 96.799 6.390 1.00 62.50 C
ATOM 18 C6 A A 366 86.686 95.574 6.117 1.00 63.75 C
ATOM 19 N6 A A 366 87.342 94.471 5.746 1.00 65.07 N
ATOM 20 N1 A A 366 85.340 95.519 6.242 1.00 63.25 N
ATOM 21 C2 A A 366 84.686 96.622 6.612 1.00 62.70 C
ATOM 22 N3 A A 366 85.166 97.830 6.897 1.00 62.51 N
ATOM 23 C4 A A 366 86.504 97.851 6.768 1.00 61.93 C
ATOM 24 P G A 367 88.832 100.914 11.828 1.00 59.23 P
ATOM 25 OP1 G A 367 90.094 100.156 11.618 1.00 56.74 O
ATOM 26 OP2 G A 367 87.623 100.216 12.348 1.00 57.73 O
ATOM 27 O5' G A 367 89.160 102.115 12.817 1.00 58.36 O
TER
ATOM 1 O3' U B 397 92.478 92.439 8.678 1.00 66.13 O
ATOM 2 P A B 398 92.351 91.954 7.150 1.00 66.47 P
ATOM 3 OP1 A B 398 93.418 90.948 6.875 1.00 65.33 O
ATOM 4 OP2 A B 398 92.242 93.159 6.284 1.00 65.83 O
ATOM 5 O5' A B 398 90.931 91.233 7.122 1.00 67.88 O
ATOM 6 C5' A B 398 90.699 90.028 7.874 1.00 70.94 C
ATOM 7 C4' A B 398 89.218 89.728 7.948 1.00 73.08 C
ATOM 8 O4' A B 398 88.573 90.637 8.885 1.00 73.53 O
ATOM 9 C3' A B 398 88.443 89.843 6.638 1.00 74.01 C
ATOM 10 O3' A B 398 87.428 88.846 6.587 1.00 76.81 O
ATOM 11 C2' A B 398 87.797 91.220 6.760 1.00 74.25 C
ATOM 12 O2' A B 398 86.616 91.381 5.998 1.00 73.48 O
ATOM 13 C1' A B 398 87.474 91.256 8.250 1.00 75.13 C
ATOM 14 N9 A B 398 87.295 92.605 8.790 1.00 76.13 N
ATOM 15 C8 A B 398 88.232 93.585 9.022 1.00 76.12 C
ATOM 16 N7 A B 398 87.726 94.695 9.505 1.00 76.43 N
ATOM 17 C5 A B 398 86.366 94.428 9.599 1.00 77.43 C
ATOM 18 C6 A B 398 85.272 95.203 10.042 1.00 78.48 C
ATOM 19 N6 A B 398 85.383 96.460 10.485 1.00 77.67 N
ATOM 20 N1 A B 398 84.045 94.633 10.012 1.00 78.57 N
ATOM 21 C2 A B 398 83.933 93.373 9.563 1.00 78.36 C
ATOM 22 N3 A B 398 84.882 92.548 9.120 1.00 76.78 N
ATOM 23 C4 A B 398 86.088 93.144 9.166 1.00 76.64 C
ATOM 24 P A B 399 87.549 87.634 5.531 1.00 78.41 P
ATOM 25 OP1 A B 399 88.033 88.171 4.229 1.00 78.17 O
ATOM 26 OP2 A B 399 86.270 86.875 5.581 1.00 77.85 O
ATOM 27 O5' A B 399 88.713 86.731 6.136 1.00 77.68 O
TER
Atoms:
OP1: (92.976,101.948,7.695)
OP2: (92.709,99.524,6.919)
C3': (88.353,100.934,9.242)
C1': (86.945,100.237,7.475)
C5': (89.971,102.144,7.658)
O4': (87.855,101.193,6.955)
C8: (88.615,98.447,6.731)
O2': (85.931,101.222,9.427)
C6: (86.686,95.574,6.117)
C5: (87.317,96.799,6.390)
C4: (86.504,97.851,6.768)
P: (92.209,100.923,6.956)
C4': (88.537,101.860,8.049)
C2': (86.964,100.359,9.004)
C2: (84.686,96.622,6.612)
N1: (85.340,95.519,6.242)
N3: (85.166,97.830,6.897)
N6: (87.342,94.471,5.746)
N7: (88.649,97.189,6.365)
N9: (87.347,98.910,7.004)
O5': (90.703,100.911,7.483)
O3': (88.433,101.665,10.461)
OP2: (92.709,99.524,6.919)
C3': (88.353,100.934,9.242)
C1': (86.945,100.237,7.475)
C5': (89.971,102.144,7.658)
O4': (87.855,101.193,6.955)
C8: (88.615,98.447,6.731)
O2': (85.931,101.222,9.427)
C6: (86.686,95.574,6.117)
C5: (87.317,96.799,6.390)
C4: (86.504,97.851,6.768)
P: (92.209,100.923,6.956)
C4': (88.537,101.860,8.049)
C2': (86.964,100.359,9.004)
C2: (84.686,96.622,6.612)
N1: (85.340,95.519,6.242)
N3: (85.166,97.830,6.897)
N6: (87.342,94.471,5.746)
N7: (88.649,97.189,6.365)
N9: (87.347,98.910,7.004)
O5': (90.703,100.911,7.483)
O3': (88.433,101.665,10.461)
OP1: (93.418,90.948,6.875)
OP2: (92.242,93.159,6.284)
C3': (88.443,89.843,6.638)
C1': (87.474,91.256,8.250)
C5': (90.699,90.028,7.874)
O4': (88.573,90.637,8.885)
C8: (88.232,93.585,9.022)
O2': (86.616,91.381,5.998)
C6: (85.272,95.203,10.042)
C5: (86.366,94.428,9.599)
C4: (86.088,93.144,9.166)
P: (92.351,91.954,7.150)
C4': (89.218,89.728,7.948)
C2': (87.797,91.220,6.760)
C2: (83.933,93.373,9.563)
N1: (84.045,94.633,10.012)
N3: (84.882,92.548,9.120)
N6: (85.383,96.460,10.485)
N7: (87.726,94.695,9.505)
N9: (87.295,92.605,8.790)
O5': (90.931,91.233,7.122)
O3': (87.428,88.846,6.587)
OP2: (92.242,93.159,6.284)
C3': (88.443,89.843,6.638)
C1': (87.474,91.256,8.250)
C5': (90.699,90.028,7.874)
O4': (88.573,90.637,8.885)
C8: (88.232,93.585,9.022)
O2': (86.616,91.381,5.998)
C6: (85.272,95.203,10.042)
C5: (86.366,94.428,9.599)
C4: (86.088,93.144,9.166)
P: (92.351,91.954,7.150)
C4': (89.218,89.728,7.948)
C2': (87.797,91.220,6.760)
C2: (83.933,93.373,9.563)
N1: (84.045,94.633,10.012)
N3: (84.882,92.548,9.120)
N6: (85.383,96.460,10.485)
N7: (87.726,94.695,9.505)
N9: (87.295,92.605,8.790)
O5': (90.931,91.233,7.122)
O3': (87.428,88.846,6.587)
Image (generated by PyMOL):