Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A125:A33
Extra
PDB:
ATOM 1 O3' A A 124 44.005 62.164 24.964 1.00 29.27 O
ATOM 2 P U A 125 42.765 61.147 24.863 1.00 34.08 P
ATOM 3 OP1 U A 125 43.044 60.125 25.901 1.00 34.59 O
ATOM 4 OP2 U A 125 42.605 60.749 23.438 1.00 30.99 O
ATOM 5 O5' U A 125 41.543 62.050 25.288 1.00 29.11 O
ATOM 6 C5' U A 125 41.469 62.482 26.637 1.00 31.85 C
ATOM 7 C4' U A 125 40.327 63.434 26.835 1.00 27.35 C
ATOM 8 O4' U A 125 40.558 64.628 26.051 1.00 27.42 O
ATOM 9 C3' U A 125 38.974 62.939 26.353 1.00 29.73 C
ATOM 10 O3' U A 125 38.332 62.088 27.287 1.00 30.85 O
ATOM 11 C2' U A 125 38.219 64.234 26.110 1.00 25.82 C
ATOM 12 O2' U A 125 37.728 64.779 27.323 1.00 32.51 O
ATOM 13 C1' U A 125 39.329 65.151 25.602 1.00 27.36 C
ATOM 14 N1 U A 125 39.310 65.250 24.132 1.00 26.05 N
ATOM 15 C2 U A 125 38.383 66.121 23.585 1.00 25.64 C
ATOM 16 O2 U A 125 37.607 66.776 24.260 1.00 26.61 O
ATOM 17 N3 U A 125 38.379 66.186 22.214 1.00 24.95 N
ATOM 18 C4 U A 125 39.197 65.476 21.361 1.00 25.50 C
ATOM 19 O4 U A 125 39.076 65.657 20.148 1.00 24.17 O
ATOM 20 C5 U A 125 40.132 64.596 22.006 1.00 27.80 C
ATOM 21 C6 U A 125 40.163 64.510 23.346 1.00 27.54 C
ATOM 22 P G A 126 37.706 60.698 26.801 1.00 35.64 P
ATOM 23 OP1 G A 126 36.827 60.225 27.906 1.00 40.15 O
ATOM 24 OP2 G A 126 38.819 59.860 26.307 1.00 31.58 O
ATOM 25 O5' G A 126 36.819 61.110 25.554 1.00 35.16 O
TER
ATOM 1 O3' U B 32 35.852 75.836 11.344 1.00 60.28 O
ATOM 2 P A B 33 35.153 75.578 12.766 1.00 59.94 P
ATOM 3 OP1 A B 33 33.698 75.491 12.480 1.00 63.51 O
ATOM 4 OP2 A B 33 35.600 76.549 13.794 1.00 59.81 O
ATOM 5 O5' A B 33 35.747 74.142 13.091 1.00 53.42 O
ATOM 6 C5' A B 33 34.910 73.014 12.926 1.00 49.91 C
ATOM 7 C4' A B 33 35.638 71.862 12.289 1.00 47.33 C
ATOM 8 O4' A B 33 36.873 71.603 13.000 1.00 44.41 O
ATOM 9 C3' A B 33 34.856 70.563 12.328 1.00 44.68 C
ATOM 10 O3' A B 33 34.079 70.439 11.153 1.00 50.47 O
ATOM 11 C2' A B 33 35.919 69.481 12.467 1.00 43.75 C
ATOM 12 O2' A B 33 36.390 69.070 11.191 1.00 45.36 O
ATOM 13 C1' A B 33 37.058 70.218 13.176 1.00 39.22 C
ATOM 14 N9 A B 33 37.172 69.953 14.624 1.00 36.91 N
ATOM 15 C8 A B 33 37.088 70.877 15.634 1.00 33.51 C
ATOM 16 N7 A B 33 37.255 70.368 16.826 1.00 32.55 N
ATOM 17 C5 A B 33 37.469 69.025 16.595 1.00 31.47 C
ATOM 18 C6 A B 33 37.710 67.946 17.467 1.00 31.17 C
ATOM 19 N6 A B 33 37.786 68.055 18.803 1.00 25.07 N
ATOM 20 N1 A B 33 37.877 66.732 16.895 1.00 31.28 N
ATOM 21 C2 A B 33 37.815 66.615 15.558 1.00 32.76 C
ATOM 22 N3 A B 33 37.590 67.558 14.646 1.00 34.68 N
ATOM 23 C4 A B 33 37.426 68.752 15.237 1.00 34.26 C
ATOM 24 P C B 34 32.582 69.882 11.171 1.00 58.52 P
ATOM 25 OP1 C B 34 32.147 69.981 9.754 1.00 57.88 O
ATOM 26 OP2 C B 34 31.820 70.604 12.227 1.00 46.19 O
ATOM 27 O5' C B 34 32.837 68.355 11.551 1.00 52.51 O
TER
ATOM 2 P U A 125 42.765 61.147 24.863 1.00 34.08 P
ATOM 3 OP1 U A 125 43.044 60.125 25.901 1.00 34.59 O
ATOM 4 OP2 U A 125 42.605 60.749 23.438 1.00 30.99 O
ATOM 5 O5' U A 125 41.543 62.050 25.288 1.00 29.11 O
ATOM 6 C5' U A 125 41.469 62.482 26.637 1.00 31.85 C
ATOM 7 C4' U A 125 40.327 63.434 26.835 1.00 27.35 C
ATOM 8 O4' U A 125 40.558 64.628 26.051 1.00 27.42 O
ATOM 9 C3' U A 125 38.974 62.939 26.353 1.00 29.73 C
ATOM 10 O3' U A 125 38.332 62.088 27.287 1.00 30.85 O
ATOM 11 C2' U A 125 38.219 64.234 26.110 1.00 25.82 C
ATOM 12 O2' U A 125 37.728 64.779 27.323 1.00 32.51 O
ATOM 13 C1' U A 125 39.329 65.151 25.602 1.00 27.36 C
ATOM 14 N1 U A 125 39.310 65.250 24.132 1.00 26.05 N
ATOM 15 C2 U A 125 38.383 66.121 23.585 1.00 25.64 C
ATOM 16 O2 U A 125 37.607 66.776 24.260 1.00 26.61 O
ATOM 17 N3 U A 125 38.379 66.186 22.214 1.00 24.95 N
ATOM 18 C4 U A 125 39.197 65.476 21.361 1.00 25.50 C
ATOM 19 O4 U A 125 39.076 65.657 20.148 1.00 24.17 O
ATOM 20 C5 U A 125 40.132 64.596 22.006 1.00 27.80 C
ATOM 21 C6 U A 125 40.163 64.510 23.346 1.00 27.54 C
ATOM 22 P G A 126 37.706 60.698 26.801 1.00 35.64 P
ATOM 23 OP1 G A 126 36.827 60.225 27.906 1.00 40.15 O
ATOM 24 OP2 G A 126 38.819 59.860 26.307 1.00 31.58 O
ATOM 25 O5' G A 126 36.819 61.110 25.554 1.00 35.16 O
TER
ATOM 1 O3' U B 32 35.852 75.836 11.344 1.00 60.28 O
ATOM 2 P A B 33 35.153 75.578 12.766 1.00 59.94 P
ATOM 3 OP1 A B 33 33.698 75.491 12.480 1.00 63.51 O
ATOM 4 OP2 A B 33 35.600 76.549 13.794 1.00 59.81 O
ATOM 5 O5' A B 33 35.747 74.142 13.091 1.00 53.42 O
ATOM 6 C5' A B 33 34.910 73.014 12.926 1.00 49.91 C
ATOM 7 C4' A B 33 35.638 71.862 12.289 1.00 47.33 C
ATOM 8 O4' A B 33 36.873 71.603 13.000 1.00 44.41 O
ATOM 9 C3' A B 33 34.856 70.563 12.328 1.00 44.68 C
ATOM 10 O3' A B 33 34.079 70.439 11.153 1.00 50.47 O
ATOM 11 C2' A B 33 35.919 69.481 12.467 1.00 43.75 C
ATOM 12 O2' A B 33 36.390 69.070 11.191 1.00 45.36 O
ATOM 13 C1' A B 33 37.058 70.218 13.176 1.00 39.22 C
ATOM 14 N9 A B 33 37.172 69.953 14.624 1.00 36.91 N
ATOM 15 C8 A B 33 37.088 70.877 15.634 1.00 33.51 C
ATOM 16 N7 A B 33 37.255 70.368 16.826 1.00 32.55 N
ATOM 17 C5 A B 33 37.469 69.025 16.595 1.00 31.47 C
ATOM 18 C6 A B 33 37.710 67.946 17.467 1.00 31.17 C
ATOM 19 N6 A B 33 37.786 68.055 18.803 1.00 25.07 N
ATOM 20 N1 A B 33 37.877 66.732 16.895 1.00 31.28 N
ATOM 21 C2 A B 33 37.815 66.615 15.558 1.00 32.76 C
ATOM 22 N3 A B 33 37.590 67.558 14.646 1.00 34.68 N
ATOM 23 C4 A B 33 37.426 68.752 15.237 1.00 34.26 C
ATOM 24 P C B 34 32.582 69.882 11.171 1.00 58.52 P
ATOM 25 OP1 C B 34 32.147 69.981 9.754 1.00 57.88 O
ATOM 26 OP2 C B 34 31.820 70.604 12.227 1.00 46.19 O
ATOM 27 O5' C B 34 32.837 68.355 11.551 1.00 52.51 O
TER
Atoms:
C4: (39.197,65.476,21.361)
N3: (38.379,66.186,22.214)
OP1: (43.044,60.125,25.901)
OP2: (42.605,60.749,23.438)
C2: (38.383,66.121,23.585)
C1': (39.329,65.151,25.602)
C3': (38.974,62.939,26.353)
O5': (41.543,62.050,25.288)
O4': (40.558,64.628,26.051)
C5': (41.469,62.482,26.637)
P: (42.765,61.147,24.863)
C4': (40.327,63.434,26.835)
C2': (38.219,64.234,26.110)
O2': (37.728,64.779,27.323)
N1: (39.310,65.250,24.132)
O4: (39.076,65.657,20.148)
O2: (37.607,66.776,24.260)
C6: (40.163,64.510,23.346)
C5: (40.132,64.596,22.006)
O3': (38.332,62.088,27.287)
N3: (38.379,66.186,22.214)
OP1: (43.044,60.125,25.901)
OP2: (42.605,60.749,23.438)
C2: (38.383,66.121,23.585)
C1': (39.329,65.151,25.602)
C3': (38.974,62.939,26.353)
O5': (41.543,62.050,25.288)
O4': (40.558,64.628,26.051)
C5': (41.469,62.482,26.637)
P: (42.765,61.147,24.863)
C4': (40.327,63.434,26.835)
C2': (38.219,64.234,26.110)
O2': (37.728,64.779,27.323)
N1: (39.310,65.250,24.132)
O4: (39.076,65.657,20.148)
O2: (37.607,66.776,24.260)
C6: (40.163,64.510,23.346)
C5: (40.132,64.596,22.006)
O3': (38.332,62.088,27.287)
OP1: (33.698,75.491,12.480)
OP2: (35.600,76.549,13.794)
C3': (34.856,70.563,12.328)
C1': (37.058,70.218,13.176)
C5': (34.910,73.014,12.926)
O4': (36.873,71.603,13.000)
C8: (37.088,70.877,15.634)
O2': (36.390,69.070,11.191)
C6: (37.710,67.946,17.467)
C5: (37.469,69.025,16.595)
C4: (37.426,68.752,15.237)
P: (35.153,75.578,12.766)
C4': (35.638,71.862,12.289)
C2': (35.919,69.481,12.467)
C2: (37.815,66.615,15.558)
N1: (37.877,66.732,16.895)
N3: (37.590,67.558,14.646)
N6: (37.786,68.055,18.803)
N7: (37.255,70.368,16.826)
N9: (37.172,69.953,14.624)
O5': (35.747,74.142,13.091)
O3': (34.079,70.439,11.153)
OP2: (35.600,76.549,13.794)
C3': (34.856,70.563,12.328)
C1': (37.058,70.218,13.176)
C5': (34.910,73.014,12.926)
O4': (36.873,71.603,13.000)
C8: (37.088,70.877,15.634)
O2': (36.390,69.070,11.191)
C6: (37.710,67.946,17.467)
C5: (37.469,69.025,16.595)
C4: (37.426,68.752,15.237)
P: (35.153,75.578,12.766)
C4': (35.638,71.862,12.289)
C2': (35.919,69.481,12.467)
C2: (37.815,66.615,15.558)
N1: (37.877,66.732,16.895)
N3: (37.590,67.558,14.646)
N6: (37.786,68.055,18.803)
N7: (37.255,70.368,16.826)
N9: (37.172,69.953,14.624)
O5': (35.747,74.142,13.091)
O3': (34.079,70.439,11.153)
Image (generated by PyMOL):