Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A882:A561
Extra
PDB:
ATOM 1 O3' C A 881 -22.725 87.045 84.373 1.00 8.54 O
ATOM 2 P U A 882 -23.140 86.121 85.593 1.00 12.10 P
ATOM 3 OP1 U A 882 -24.187 86.849 86.377 1.00 12.10 O
ATOM 4 OP2 U A 882 -21.865 85.709 86.266 1.00 12.10 O
ATOM 5 O5' U A 882 -23.785 84.879 84.853 1.00 12.10 O
ATOM 6 C5' U A 882 -24.581 85.063 83.696 1.00 12.10 C
ATOM 7 C4' U A 882 -25.076 83.745 83.186 1.00 12.10 C
ATOM 8 O4' U A 882 -24.065 83.159 82.339 1.00 12.10 O
ATOM 9 C3' U A 882 -25.376 82.719 84.265 1.00 12.10 C
ATOM 10 O3' U A 882 -26.542 82.002 83.927 1.00 12.10 O
ATOM 11 C2' U A 882 -24.185 81.789 84.232 1.00 12.10 C
ATOM 12 O2' U A 882 -24.486 80.471 84.635 1.00 12.10 O
ATOM 13 C1' U A 882 -23.782 81.853 82.764 1.00 12.10 C
ATOM 14 N1 U A 882 -22.353 81.604 82.528 1.00 11.96 N
ATOM 15 C2 U A 882 -21.977 80.720 81.550 1.00 11.96 C
ATOM 16 O2 U A 882 -22.812 80.152 80.884 1.00 11.96 O
ATOM 17 N3 U A 882 -20.631 80.533 81.387 1.00 11.96 N
ATOM 18 C4 U A 882 -19.646 81.139 82.119 1.00 11.96 C
ATOM 19 O4 U A 882 -18.470 80.904 81.924 1.00 11.96 O
ATOM 20 C5 U A 882 -20.105 82.053 83.096 1.00 11.96 C
ATOM 21 C6 U A 882 -21.415 82.256 83.269 1.00 11.96 C
ATOM 22 P G A 883 -27.774 82.025 84.941 1.00 7.88 P
ATOM 23 OP1 G A 883 -27.224 82.403 86.261 1.00 7.88 O
ATOM 24 OP2 G A 883 -28.480 80.716 84.808 1.00 7.88 O
ATOM 25 O5' G A 883 -28.686 83.214 84.381 1.00 7.88 O
TER
ATOM 1 O3' U B 560 -17.841 73.162 82.234 1.00 15.97 O
ATOM 2 P A B 561 -17.327 71.845 81.471 1.00 18.11 P
ATOM 3 OP1 A B 561 -18.480 70.907 81.450 1.00 18.11 O
ATOM 4 OP2 A B 561 -16.062 71.400 82.113 1.00 18.11 O
ATOM 5 O5' A B 561 -17.018 72.391 80.003 1.00 18.11 O
ATOM 6 C5' A B 561 -18.024 72.394 79.018 1.00 18.11 C
ATOM 7 C4' A B 561 -17.574 73.054 77.748 1.00 18.11 C
ATOM 8 O4' A B 561 -18.694 73.723 77.153 1.00 18.11 O
ATOM 9 C3' A B 561 -16.483 74.108 77.877 1.00 18.11 C
ATOM 10 O3' A B 561 -15.197 73.531 77.686 1.00 18.11 O
ATOM 11 C2' A B 561 -16.825 75.152 76.806 1.00 18.11 C
ATOM 12 O2' A B 561 -16.008 74.960 75.656 1.00 18.11 O
ATOM 13 C1' A B 561 -18.280 74.839 76.434 1.00 18.11 C
ATOM 14 N9 A B 561 -19.236 75.924 76.709 1.00 17.99 N
ATOM 15 C8 A B 561 -20.329 76.149 75.896 1.00 17.99 C
ATOM 16 N7 A B 561 -21.164 77.077 76.281 1.00 17.99 N
ATOM 17 C5 A B 561 -20.588 77.457 77.466 1.00 17.99 C
ATOM 18 C6 A B 561 -21.013 78.421 78.361 1.00 17.99 C
ATOM 19 N6 A B 561 -22.111 79.139 78.143 1.00 17.99 N
ATOM 20 N1 A B 561 -20.250 78.610 79.466 1.00 17.99 N
ATOM 21 C2 A B 561 -19.145 77.848 79.635 1.00 17.99 C
ATOM 22 N3 A B 561 -18.637 76.888 78.845 1.00 17.99 N
ATOM 23 C4 A B 561 -19.421 76.749 77.768 1.00 17.99 C
ATOM 24 P C B 562 -13.855 74.264 78.184 1.00 18.49 P
ATOM 25 OP1 C B 562 -13.929 74.352 79.663 1.00 18.49 O
ATOM 26 OP2 C B 562 -13.719 75.515 77.404 1.00 18.49 O
ATOM 27 O5' C B 562 -12.721 73.221 77.752 1.00 18.49 O
TER
ATOM 2 P U A 882 -23.140 86.121 85.593 1.00 12.10 P
ATOM 3 OP1 U A 882 -24.187 86.849 86.377 1.00 12.10 O
ATOM 4 OP2 U A 882 -21.865 85.709 86.266 1.00 12.10 O
ATOM 5 O5' U A 882 -23.785 84.879 84.853 1.00 12.10 O
ATOM 6 C5' U A 882 -24.581 85.063 83.696 1.00 12.10 C
ATOM 7 C4' U A 882 -25.076 83.745 83.186 1.00 12.10 C
ATOM 8 O4' U A 882 -24.065 83.159 82.339 1.00 12.10 O
ATOM 9 C3' U A 882 -25.376 82.719 84.265 1.00 12.10 C
ATOM 10 O3' U A 882 -26.542 82.002 83.927 1.00 12.10 O
ATOM 11 C2' U A 882 -24.185 81.789 84.232 1.00 12.10 C
ATOM 12 O2' U A 882 -24.486 80.471 84.635 1.00 12.10 O
ATOM 13 C1' U A 882 -23.782 81.853 82.764 1.00 12.10 C
ATOM 14 N1 U A 882 -22.353 81.604 82.528 1.00 11.96 N
ATOM 15 C2 U A 882 -21.977 80.720 81.550 1.00 11.96 C
ATOM 16 O2 U A 882 -22.812 80.152 80.884 1.00 11.96 O
ATOM 17 N3 U A 882 -20.631 80.533 81.387 1.00 11.96 N
ATOM 18 C4 U A 882 -19.646 81.139 82.119 1.00 11.96 C
ATOM 19 O4 U A 882 -18.470 80.904 81.924 1.00 11.96 O
ATOM 20 C5 U A 882 -20.105 82.053 83.096 1.00 11.96 C
ATOM 21 C6 U A 882 -21.415 82.256 83.269 1.00 11.96 C
ATOM 22 P G A 883 -27.774 82.025 84.941 1.00 7.88 P
ATOM 23 OP1 G A 883 -27.224 82.403 86.261 1.00 7.88 O
ATOM 24 OP2 G A 883 -28.480 80.716 84.808 1.00 7.88 O
ATOM 25 O5' G A 883 -28.686 83.214 84.381 1.00 7.88 O
TER
ATOM 1 O3' U B 560 -17.841 73.162 82.234 1.00 15.97 O
ATOM 2 P A B 561 -17.327 71.845 81.471 1.00 18.11 P
ATOM 3 OP1 A B 561 -18.480 70.907 81.450 1.00 18.11 O
ATOM 4 OP2 A B 561 -16.062 71.400 82.113 1.00 18.11 O
ATOM 5 O5' A B 561 -17.018 72.391 80.003 1.00 18.11 O
ATOM 6 C5' A B 561 -18.024 72.394 79.018 1.00 18.11 C
ATOM 7 C4' A B 561 -17.574 73.054 77.748 1.00 18.11 C
ATOM 8 O4' A B 561 -18.694 73.723 77.153 1.00 18.11 O
ATOM 9 C3' A B 561 -16.483 74.108 77.877 1.00 18.11 C
ATOM 10 O3' A B 561 -15.197 73.531 77.686 1.00 18.11 O
ATOM 11 C2' A B 561 -16.825 75.152 76.806 1.00 18.11 C
ATOM 12 O2' A B 561 -16.008 74.960 75.656 1.00 18.11 O
ATOM 13 C1' A B 561 -18.280 74.839 76.434 1.00 18.11 C
ATOM 14 N9 A B 561 -19.236 75.924 76.709 1.00 17.99 N
ATOM 15 C8 A B 561 -20.329 76.149 75.896 1.00 17.99 C
ATOM 16 N7 A B 561 -21.164 77.077 76.281 1.00 17.99 N
ATOM 17 C5 A B 561 -20.588 77.457 77.466 1.00 17.99 C
ATOM 18 C6 A B 561 -21.013 78.421 78.361 1.00 17.99 C
ATOM 19 N6 A B 561 -22.111 79.139 78.143 1.00 17.99 N
ATOM 20 N1 A B 561 -20.250 78.610 79.466 1.00 17.99 N
ATOM 21 C2 A B 561 -19.145 77.848 79.635 1.00 17.99 C
ATOM 22 N3 A B 561 -18.637 76.888 78.845 1.00 17.99 N
ATOM 23 C4 A B 561 -19.421 76.749 77.768 1.00 17.99 C
ATOM 24 P C B 562 -13.855 74.264 78.184 1.00 18.49 P
ATOM 25 OP1 C B 562 -13.929 74.352 79.663 1.00 18.49 O
ATOM 26 OP2 C B 562 -13.719 75.515 77.404 1.00 18.49 O
ATOM 27 O5' C B 562 -12.721 73.221 77.752 1.00 18.49 O
TER
Atoms:
C4: (-19.646,81.139,82.119)
N3: (-20.631,80.533,81.387)
OP1: (-24.187,86.849,86.377)
OP2: (-21.865,85.709,86.266)
C2: (-21.977,80.720,81.550)
C1': (-23.782,81.853,82.764)
C3': (-25.376,82.719,84.265)
O5': (-23.785,84.879,84.853)
O4': (-24.065,83.159,82.339)
C5': (-24.581,85.063,83.696)
P: (-23.140,86.121,85.593)
C4': (-25.076,83.745,83.186)
C2': (-24.185,81.789,84.232)
O2': (-24.486,80.471,84.635)
N1: (-22.353,81.604,82.528)
O4: (-18.470,80.904,81.924)
O2: (-22.812,80.152,80.884)
C6: (-21.415,82.256,83.269)
C5: (-20.105,82.053,83.096)
O3': (-26.542,82.002,83.927)
N3: (-20.631,80.533,81.387)
OP1: (-24.187,86.849,86.377)
OP2: (-21.865,85.709,86.266)
C2: (-21.977,80.720,81.550)
C1': (-23.782,81.853,82.764)
C3': (-25.376,82.719,84.265)
O5': (-23.785,84.879,84.853)
O4': (-24.065,83.159,82.339)
C5': (-24.581,85.063,83.696)
P: (-23.140,86.121,85.593)
C4': (-25.076,83.745,83.186)
C2': (-24.185,81.789,84.232)
O2': (-24.486,80.471,84.635)
N1: (-22.353,81.604,82.528)
O4: (-18.470,80.904,81.924)
O2: (-22.812,80.152,80.884)
C6: (-21.415,82.256,83.269)
C5: (-20.105,82.053,83.096)
O3': (-26.542,82.002,83.927)
OP1: (-18.480,70.907,81.450)
OP2: (-16.062,71.400,82.113)
C3': (-16.483,74.108,77.877)
C1': (-18.280,74.839,76.434)
C5': (-18.024,72.394,79.018)
O4': (-18.694,73.723,77.153)
C8: (-20.329,76.149,75.896)
O2': (-16.008,74.960,75.656)
C6: (-21.013,78.421,78.361)
C5: (-20.588,77.457,77.466)
C4: (-19.421,76.749,77.768)
P: (-17.327,71.845,81.471)
C4': (-17.574,73.054,77.748)
C2': (-16.825,75.152,76.806)
C2: (-19.145,77.848,79.635)
N1: (-20.250,78.610,79.466)
N3: (-18.637,76.888,78.845)
N6: (-22.111,79.139,78.143)
N7: (-21.164,77.077,76.281)
N9: (-19.236,75.924,76.709)
O5': (-17.018,72.391,80.003)
O3': (-15.197,73.531,77.686)
OP2: (-16.062,71.400,82.113)
C3': (-16.483,74.108,77.877)
C1': (-18.280,74.839,76.434)
C5': (-18.024,72.394,79.018)
O4': (-18.694,73.723,77.153)
C8: (-20.329,76.149,75.896)
O2': (-16.008,74.960,75.656)
C6: (-21.013,78.421,78.361)
C5: (-20.588,77.457,77.466)
C4: (-19.421,76.749,77.768)
P: (-17.327,71.845,81.471)
C4': (-17.574,73.054,77.748)
C2': (-16.825,75.152,76.806)
C2: (-19.145,77.848,79.635)
N1: (-20.250,78.610,79.466)
N3: (-18.637,76.888,78.845)
N6: (-22.111,79.139,78.143)
N7: (-21.164,77.077,76.281)
N9: (-19.236,75.924,76.709)
O5': (-17.018,72.391,80.003)
O3': (-15.197,73.531,77.686)
Image (generated by PyMOL):