ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A2256:A2251

Extra

PDB:
ATOM 1 O3' G A2255 -124.111 -60.562 32.447 1.00 54.77 O
ATOM 2 P U A2256 -123.843 -59.263 31.569 1.00 57.04 P
ATOM 3 OP1 U A2256 -122.885 -58.416 32.301 1.00 63.50 O
ATOM 4 OP2 U A2256 -125.137 -58.706 31.129 1.00 60.50 O
ATOM 5 O5' U A2256 -123.186 -59.867 30.243 1.00 64.38 O
ATOM 6 C5' U A2256 -121.896 -60.455 30.222 1.00 59.32 C
ATOM 7 C4' U A2256 -121.719 -61.213 28.916 1.00 48.60 C
ATOM 8 O4' U A2256 -122.723 -62.245 28.867 1.00 45.18 O
ATOM 9 C3' U A2256 -121.975 -60.434 27.632 1.00 51.99 C
ATOM 10 O3' U A2256 -120.831 -59.707 27.195 1.00 48.93 O
ATOM 11 C2' U A2256 -122.282 -61.557 26.645 1.00 50.85 C
ATOM 12 O2' U A2256 -121.128 -62.143 26.080 1.00 46.54 O
ATOM 13 C1' U A2256 -123.012 -62.566 27.522 1.00 57.43 C
ATOM 14 N1 U A2256 -124.484 -62.494 27.330 1.00 71.32 N
ATOM 15 C2 U A2256 -125.072 -63.142 26.258 1.00 72.86 C
ATOM 16 O2 U A2256 -124.456 -63.799 25.436 1.00 65.06 O
ATOM 17 N3 U A2256 -126.432 -62.992 26.181 1.00 72.46 N
ATOM 18 C4 U A2256 -127.240 -62.279 27.046 1.00 69.68 C
ATOM 19 O4 U A2256 -128.452 -62.238 26.845 1.00 73.14 O
ATOM 20 C5 U A2256 -126.550 -61.635 28.135 1.00 70.38 C
ATOM 21 C6 U A2256 -125.226 -61.762 28.232 1.00 68.15 C
ATOM 22 P A A2257 -120.438 -58.246 27.740 1.00 58.68 P
ATOM 23 OP1 A A2257 -120.045 -58.345 29.173 1.00 47.22 O
ATOM 24 OP2 A A2257 -121.463 -57.270 27.301 1.00 74.77 O
ATOM 25 O5' A A2257 -119.124 -57.981 26.866 1.00 70.39 O
TER

ATOM 1 O3' A B2250 -131.364 -61.235 23.880 1.00 90.69 O
ATOM 2 P A B2251 -132.749 -61.964 23.517 1.00 80.53 P
ATOM 3 OP1 A B2251 -133.672 -60.970 22.911 1.00 77.48 O
ATOM 4 OP2 A B2251 -133.136 -62.685 24.753 1.00 93.26 O
ATOM 5 O5' A B2251 -132.356 -63.056 22.415 1.00 64.31 O
ATOM 6 C5' A B2251 -133.324 -63.503 21.485 1.00 76.75 C
ATOM 7 C4' A B2251 -132.827 -64.731 20.750 1.00 83.85 C
ATOM 8 O4' A B2251 -131.516 -64.471 20.212 1.00 77.36 O
ATOM 9 C3' A B2251 -132.629 -65.960 21.617 1.00 87.71 C
ATOM 10 O3' A B2251 -133.868 -66.667 21.695 1.00 93.92 O
ATOM 11 C2' A B2251 -131.568 -66.749 20.849 1.00 93.91 C
ATOM 12 O2' A B2251 -132.162 -67.672 19.960 1.00 90.98 O
ATOM 13 C1' A B2251 -130.833 -65.695 20.024 1.00 87.92 C
ATOM 14 N9 A B2251 -129.419 -65.460 20.332 1.00 87.96 N
ATOM 15 C8 A B2251 -128.372 -65.515 19.453 1.00 88.95 C
ATOM 16 N7 A B2251 -127.202 -65.245 19.981 1.00 79.17 N
ATOM 17 C5 A B2251 -127.504 -64.982 21.300 1.00 75.07 C
ATOM 18 C6 A B2251 -126.697 -64.627 22.390 1.00 83.21 C
ATOM 19 N6 A B2251 -125.375 -64.470 22.295 1.00 87.20 N
ATOM 20 N1 A B2251 -127.297 -64.438 23.581 1.00 72.24 N
ATOM 21 C2 A B2251 -128.619 -64.597 23.655 1.00 78.54 C
ATOM 22 N3 A B2251 -129.485 -64.928 22.698 1.00 84.10 N
ATOM 23 C4 A B2251 -128.857 -65.108 21.533 1.00 79.09 C
ATOM 24 P A B2252 -134.287 -67.349 23.083 1.00 79.86 P
ATOM 25 OP1 A B2252 -133.181 -67.059 24.050 1.00 65.03 O
ATOM 26 OP2 A B2252 -134.693 -68.753 22.789 1.00 69.67 O
ATOM 27 O5' A B2252 -135.641 -66.575 23.495 1.00 72.76 O
TER

Atoms:
C4: (-127.240,-62.279,27.046)
N3: (-126.432,-62.992,26.181)
OP1: (-122.885,-58.416,32.301)
OP2: (-125.137,-58.706,31.129)
C2: (-125.072,-63.142,26.258)
C1': (-123.012,-62.566,27.522)
C3': (-121.975,-60.434,27.632)
O5': (-123.186,-59.867,30.243)
O4': (-122.723,-62.245,28.867)
C5': (-121.896,-60.455,30.222)
P: (-123.843,-59.263,31.569)
C4': (-121.719,-61.213,28.916)
C2': (-122.282,-61.557,26.645)
O2': (-121.128,-62.143,26.080)
N1: (-124.484,-62.494,27.330)
O4: (-128.452,-62.238,26.845)
O2: (-124.456,-63.799,25.436)
C6: (-125.226,-61.762,28.232)
C5: (-126.550,-61.635,28.135)
O3': (-120.831,-59.707,27.195)
OP1: (-133.672,-60.970,22.911)
OP2: (-133.136,-62.685,24.753)
C3': (-132.629,-65.960,21.617)
C1': (-130.833,-65.695,20.024)
C5': (-133.324,-63.503,21.485)
O4': (-131.516,-64.471,20.212)
C8: (-128.372,-65.515,19.453)
O2': (-132.162,-67.672,19.960)
C6: (-126.697,-64.627,22.390)
C5: (-127.504,-64.982,21.300)
C4: (-128.857,-65.108,21.533)
P: (-132.749,-61.964,23.517)
C4': (-132.827,-64.731,20.750)
C2': (-131.568,-66.749,20.849)
C2: (-128.619,-64.597,23.655)
N1: (-127.297,-64.438,23.581)
N3: (-129.485,-64.928,22.698)
N6: (-125.375,-64.470,22.295)
N7: (-127.202,-65.245,19.981)
N9: (-129.419,-65.460,20.332)
O5': (-132.356,-63.056,22.415)
O3': (-133.868,-66.667,21.695)
Image (generated by PyMOL):
PyMOL image
show in jmol