Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21282:21125
Extra
PDB:
ATOM 1 O3' G A1281 -85.696 -2.455 76.132 1.00 71.15 O
ATOM 2 P A A1282 -86.224 -3.974 76.033 1.00 78.27 P
ATOM 3 OP1 A A1282 -87.189 -4.028 74.915 1.00 78.76 O
ATOM 4 OP2 A A1282 -86.678 -4.372 77.390 1.00 78.58 O
ATOM 5 O5' A A1282 -84.924 -4.773 75.627 1.00 77.53 O
ATOM 6 C5' A A1282 -84.241 -4.459 74.424 1.00 77.12 C
ATOM 7 C4' A A1282 -82.867 -5.053 74.421 1.00 76.39 C
ATOM 8 O4' A A1282 -82.062 -4.388 75.423 1.00 76.02 O
ATOM 9 C3' A A1282 -82.801 -6.510 74.810 1.00 76.36 C
ATOM 10 O3' A A1282 -83.108 -7.385 73.748 1.00 76.48 O
ATOM 11 C2' A A1282 -81.394 -6.663 75.355 1.00 75.67 C
ATOM 12 O2' A A1282 -80.464 -6.802 74.289 1.00 75.17 O
ATOM 13 C1' A A1282 -81.186 -5.299 76.026 1.00 75.60 C
ATOM 14 N9 A A1282 -81.486 -5.317 77.463 1.00 75.83 N
ATOM 15 C8 A A1282 -82.696 -5.429 78.047 1.00 76.48 C
ATOM 16 N7 A A1282 -82.656 -5.404 79.355 1.00 76.56 N
ATOM 17 C5 A A1282 -81.327 -5.236 79.661 1.00 75.91 C
ATOM 18 C6 A A1282 -80.620 -5.120 80.872 1.00 75.66 C
ATOM 19 N6 A A1282 -81.155 -5.153 82.085 1.00 76.05 N
ATOM 20 N1 A A1282 -79.286 -4.959 80.813 1.00 75.00 N
ATOM 21 C2 A A1282 -78.716 -4.912 79.613 1.00 74.63 C
ATOM 22 N3 A A1282 -79.277 -5.010 78.405 1.00 74.81 N
ATOM 23 C4 A A1282 -80.604 -5.172 78.495 1.00 75.46 C
ATOM 24 P U A1283 -83.825 -8.762 74.097 1.00 78.15 P
ATOM 25 OP1 U A1283 -83.178 -9.805 73.305 1.00 77.79 O
ATOM 26 OP2 U A1283 -85.281 -8.553 73.949 1.00 78.91 O
ATOM 27 O5' U A1283 -83.457 -8.920 75.625 1.00 78.04 O
TER
ATOM 1 O3' A B1124 -72.597 -2.924 87.099 1.00 67.44 O
ATOM 2 P A B1125 -72.615 -4.546 87.147 1.00 69.03 P
ATOM 3 OP1 A B1125 -73.067 -4.957 88.500 1.00 69.45 O
ATOM 4 OP2 A B1125 -71.286 -5.021 86.667 1.00 68.45 O
ATOM 5 O5' A B1125 -73.740 -4.919 86.095 1.00 69.36 O
ATOM 6 C5' A B1125 -75.074 -5.096 86.524 1.00 70.00 C
ATOM 7 C4' A B1125 -76.037 -4.974 85.381 1.00 70.26 C
ATOM 8 O4' A B1125 -75.578 -3.956 84.458 1.00 69.90 O
ATOM 9 C3' A B1125 -76.220 -6.219 84.525 1.00 70.29 C
ATOM 10 O3' A B1125 -77.152 -7.130 85.095 1.00 70.83 O
ATOM 11 C2' A B1125 -76.674 -5.632 83.196 1.00 70.30 C
ATOM 12 O2' A B1125 -78.056 -5.312 83.237 1.00 70.93 O
ATOM 13 C1' A B1125 -75.871 -4.332 83.140 1.00 69.89 C
ATOM 14 N9 A B1125 -74.600 -4.525 82.446 1.00 69.26 N
ATOM 15 C8 A B1125 -73.360 -4.533 83.013 1.00 68.80 C
ATOM 16 N7 A B1125 -72.423 -4.786 82.136 1.00 68.33 N
ATOM 17 C5 A B1125 -73.099 -4.958 80.946 1.00 68.49 C
ATOM 18 C6 A B1125 -72.682 -5.242 79.664 1.00 68.22 C
ATOM 19 N6 A B1125 -71.408 -5.387 79.377 1.00 67.68 N
ATOM 20 N1 A B1125 -73.595 -5.353 78.682 1.00 68.52 N
ATOM 21 C2 A B1125 -74.873 -5.181 78.974 1.00 69.09 C
ATOM 22 N3 A B1125 -75.401 -4.919 80.166 1.00 69.41 N
ATOM 23 C4 A B1125 -74.446 -4.810 81.113 1.00 69.07 C
ATOM 24 P U B1126 -77.139 -8.692 84.706 1.00 74.53 P
ATOM 25 OP1 U B1126 -78.211 -9.356 85.489 1.00 75.18 O
ATOM 26 OP2 U B1126 -75.738 -9.175 84.861 1.00 73.97 O
ATOM 27 O5' U B1126 -77.555 -8.684 83.173 1.00 74.51 O
TER
ATOM 2 P A A1282 -86.224 -3.974 76.033 1.00 78.27 P
ATOM 3 OP1 A A1282 -87.189 -4.028 74.915 1.00 78.76 O
ATOM 4 OP2 A A1282 -86.678 -4.372 77.390 1.00 78.58 O
ATOM 5 O5' A A1282 -84.924 -4.773 75.627 1.00 77.53 O
ATOM 6 C5' A A1282 -84.241 -4.459 74.424 1.00 77.12 C
ATOM 7 C4' A A1282 -82.867 -5.053 74.421 1.00 76.39 C
ATOM 8 O4' A A1282 -82.062 -4.388 75.423 1.00 76.02 O
ATOM 9 C3' A A1282 -82.801 -6.510 74.810 1.00 76.36 C
ATOM 10 O3' A A1282 -83.108 -7.385 73.748 1.00 76.48 O
ATOM 11 C2' A A1282 -81.394 -6.663 75.355 1.00 75.67 C
ATOM 12 O2' A A1282 -80.464 -6.802 74.289 1.00 75.17 O
ATOM 13 C1' A A1282 -81.186 -5.299 76.026 1.00 75.60 C
ATOM 14 N9 A A1282 -81.486 -5.317 77.463 1.00 75.83 N
ATOM 15 C8 A A1282 -82.696 -5.429 78.047 1.00 76.48 C
ATOM 16 N7 A A1282 -82.656 -5.404 79.355 1.00 76.56 N
ATOM 17 C5 A A1282 -81.327 -5.236 79.661 1.00 75.91 C
ATOM 18 C6 A A1282 -80.620 -5.120 80.872 1.00 75.66 C
ATOM 19 N6 A A1282 -81.155 -5.153 82.085 1.00 76.05 N
ATOM 20 N1 A A1282 -79.286 -4.959 80.813 1.00 75.00 N
ATOM 21 C2 A A1282 -78.716 -4.912 79.613 1.00 74.63 C
ATOM 22 N3 A A1282 -79.277 -5.010 78.405 1.00 74.81 N
ATOM 23 C4 A A1282 -80.604 -5.172 78.495 1.00 75.46 C
ATOM 24 P U A1283 -83.825 -8.762 74.097 1.00 78.15 P
ATOM 25 OP1 U A1283 -83.178 -9.805 73.305 1.00 77.79 O
ATOM 26 OP2 U A1283 -85.281 -8.553 73.949 1.00 78.91 O
ATOM 27 O5' U A1283 -83.457 -8.920 75.625 1.00 78.04 O
TER
ATOM 1 O3' A B1124 -72.597 -2.924 87.099 1.00 67.44 O
ATOM 2 P A B1125 -72.615 -4.546 87.147 1.00 69.03 P
ATOM 3 OP1 A B1125 -73.067 -4.957 88.500 1.00 69.45 O
ATOM 4 OP2 A B1125 -71.286 -5.021 86.667 1.00 68.45 O
ATOM 5 O5' A B1125 -73.740 -4.919 86.095 1.00 69.36 O
ATOM 6 C5' A B1125 -75.074 -5.096 86.524 1.00 70.00 C
ATOM 7 C4' A B1125 -76.037 -4.974 85.381 1.00 70.26 C
ATOM 8 O4' A B1125 -75.578 -3.956 84.458 1.00 69.90 O
ATOM 9 C3' A B1125 -76.220 -6.219 84.525 1.00 70.29 C
ATOM 10 O3' A B1125 -77.152 -7.130 85.095 1.00 70.83 O
ATOM 11 C2' A B1125 -76.674 -5.632 83.196 1.00 70.30 C
ATOM 12 O2' A B1125 -78.056 -5.312 83.237 1.00 70.93 O
ATOM 13 C1' A B1125 -75.871 -4.332 83.140 1.00 69.89 C
ATOM 14 N9 A B1125 -74.600 -4.525 82.446 1.00 69.26 N
ATOM 15 C8 A B1125 -73.360 -4.533 83.013 1.00 68.80 C
ATOM 16 N7 A B1125 -72.423 -4.786 82.136 1.00 68.33 N
ATOM 17 C5 A B1125 -73.099 -4.958 80.946 1.00 68.49 C
ATOM 18 C6 A B1125 -72.682 -5.242 79.664 1.00 68.22 C
ATOM 19 N6 A B1125 -71.408 -5.387 79.377 1.00 67.68 N
ATOM 20 N1 A B1125 -73.595 -5.353 78.682 1.00 68.52 N
ATOM 21 C2 A B1125 -74.873 -5.181 78.974 1.00 69.09 C
ATOM 22 N3 A B1125 -75.401 -4.919 80.166 1.00 69.41 N
ATOM 23 C4 A B1125 -74.446 -4.810 81.113 1.00 69.07 C
ATOM 24 P U B1126 -77.139 -8.692 84.706 1.00 74.53 P
ATOM 25 OP1 U B1126 -78.211 -9.356 85.489 1.00 75.18 O
ATOM 26 OP2 U B1126 -75.738 -9.175 84.861 1.00 73.97 O
ATOM 27 O5' U B1126 -77.555 -8.684 83.173 1.00 74.51 O
TER
Atoms:
OP1: (-87.189,-4.028,74.915)
OP2: (-86.678,-4.372,77.390)
C3': (-82.801,-6.510,74.810)
C1': (-81.186,-5.299,76.026)
C5': (-84.241,-4.459,74.424)
O4': (-82.062,-4.388,75.423)
C8: (-82.696,-5.429,78.047)
O2': (-80.464,-6.802,74.289)
C6: (-80.620,-5.120,80.872)
C5: (-81.327,-5.236,79.661)
C4: (-80.604,-5.172,78.495)
P: (-86.224,-3.974,76.033)
C4': (-82.867,-5.053,74.421)
C2': (-81.394,-6.663,75.355)
C2: (-78.716,-4.912,79.613)
N1: (-79.286,-4.959,80.813)
N3: (-79.277,-5.010,78.405)
N6: (-81.155,-5.153,82.085)
N7: (-82.656,-5.404,79.355)
N9: (-81.486,-5.317,77.463)
O5': (-84.924,-4.773,75.627)
O3': (-83.108,-7.385,73.748)
OP2: (-86.678,-4.372,77.390)
C3': (-82.801,-6.510,74.810)
C1': (-81.186,-5.299,76.026)
C5': (-84.241,-4.459,74.424)
O4': (-82.062,-4.388,75.423)
C8: (-82.696,-5.429,78.047)
O2': (-80.464,-6.802,74.289)
C6: (-80.620,-5.120,80.872)
C5: (-81.327,-5.236,79.661)
C4: (-80.604,-5.172,78.495)
P: (-86.224,-3.974,76.033)
C4': (-82.867,-5.053,74.421)
C2': (-81.394,-6.663,75.355)
C2: (-78.716,-4.912,79.613)
N1: (-79.286,-4.959,80.813)
N3: (-79.277,-5.010,78.405)
N6: (-81.155,-5.153,82.085)
N7: (-82.656,-5.404,79.355)
N9: (-81.486,-5.317,77.463)
O5': (-84.924,-4.773,75.627)
O3': (-83.108,-7.385,73.748)
OP1: (-73.067,-4.957,88.500)
OP2: (-71.286,-5.021,86.667)
C3': (-76.220,-6.219,84.525)
C1': (-75.871,-4.332,83.140)
C5': (-75.074,-5.096,86.524)
O4': (-75.578,-3.956,84.458)
C8: (-73.360,-4.533,83.013)
O2': (-78.056,-5.312,83.237)
C6: (-72.682,-5.242,79.664)
C5: (-73.099,-4.958,80.946)
C4: (-74.446,-4.810,81.113)
P: (-72.615,-4.546,87.147)
C4': (-76.037,-4.974,85.381)
C2': (-76.674,-5.632,83.196)
C2: (-74.873,-5.181,78.974)
N1: (-73.595,-5.353,78.682)
N3: (-75.401,-4.919,80.166)
N6: (-71.408,-5.387,79.377)
N7: (-72.423,-4.786,82.136)
N9: (-74.600,-4.525,82.446)
O5': (-73.740,-4.919,86.095)
O3': (-77.152,-7.130,85.095)
OP2: (-71.286,-5.021,86.667)
C3': (-76.220,-6.219,84.525)
C1': (-75.871,-4.332,83.140)
C5': (-75.074,-5.096,86.524)
O4': (-75.578,-3.956,84.458)
C8: (-73.360,-4.533,83.013)
O2': (-78.056,-5.312,83.237)
C6: (-72.682,-5.242,79.664)
C5: (-73.099,-4.958,80.946)
C4: (-74.446,-4.810,81.113)
P: (-72.615,-4.546,87.147)
C4': (-76.037,-4.974,85.381)
C2': (-76.674,-5.632,83.196)
C2: (-74.873,-5.181,78.974)
N1: (-73.595,-5.353,78.682)
N3: (-75.401,-4.919,80.166)
N6: (-71.408,-5.387,79.377)
N7: (-72.423,-4.786,82.136)
N9: (-74.600,-4.525,82.446)
O5': (-73.740,-4.919,86.095)
O3': (-77.152,-7.130,85.095)
Image (generated by PyMOL):