Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A366:A53
Extra
PDB:
ATOM 1 O3' U A 365 -38.284 33.968 113.345 1.00 22.47 O
ATOM 2 P U A 366 -39.308 33.927 114.589 1.00 19.96 P
ATOM 3 OP1 U A 366 -39.891 32.565 114.630 1.00 19.96 O
ATOM 4 OP2 U A 366 -40.220 35.078 114.449 1.00 19.96 O
ATOM 5 O5' U A 366 -38.344 34.123 115.826 1.00 19.96 O
ATOM 6 C5' U A 366 -37.430 33.098 116.175 1.00 19.96 C
ATOM 7 C4' U A 366 -36.108 33.666 116.573 1.00 19.96 C
ATOM 8 O4' U A 366 -36.298 34.560 117.675 1.00 19.96 O
ATOM 9 C3' U A 366 -35.063 32.675 117.052 1.00 19.96 C
ATOM 10 O3' U A 366 -34.344 32.110 115.960 1.00 19.96 O
ATOM 11 C2' U A 366 -34.193 33.510 118.009 1.00 19.96 C
ATOM 12 O2' U A 366 -33.066 34.064 117.338 1.00 19.96 O
ATOM 13 C1' U A 366 -35.132 34.653 118.427 1.00 19.96 C
ATOM 14 N1 U A 366 -35.497 34.612 119.847 1.00 20.90 N
ATOM 15 C2 U A 366 -35.255 35.746 120.623 1.00 20.90 C
ATOM 16 O2 U A 366 -34.741 36.761 120.195 1.00 20.90 O
ATOM 17 N3 U A 366 -35.626 35.652 121.936 1.00 20.90 N
ATOM 18 C4 U A 366 -36.212 34.564 122.529 1.00 20.90 C
ATOM 19 O4 U A 366 -36.488 34.610 123.715 1.00 20.90 O
ATOM 20 C5 U A 366 -36.446 33.441 121.676 1.00 20.90 C
ATOM 21 C6 U A 366 -36.097 33.503 120.381 1.00 20.90 C
ATOM 22 P G A 367 -33.126 31.083 116.187 1.00 16.56 P
ATOM 23 OP1 G A 367 -33.102 30.722 117.621 1.00 16.56 O
ATOM 24 OP2 G A 367 -31.926 31.684 115.588 1.00 16.56 O
ATOM 25 O5' G A 367 -33.574 29.841 115.329 1.00 16.56 O
TER
ATOM 1 O3' C B 52 -29.658 45.067 127.299 1.00 13.81 O
ATOM 2 P A B 53 -29.535 43.478 127.358 1.00 12.52 P
ATOM 3 OP1 A B 53 -28.822 43.123 128.617 1.00 12.52 O
ATOM 4 OP2 A B 53 -28.948 43.057 126.061 1.00 12.52 O
ATOM 5 O5' A B 53 -31.049 43.021 127.451 1.00 12.52 O
ATOM 6 C5' A B 53 -31.727 43.076 128.681 1.00 12.52 C
ATOM 7 C4' A B 53 -32.780 42.015 128.772 1.00 12.52 C
ATOM 8 O4' A B 53 -33.722 42.173 127.689 1.00 12.52 O
ATOM 9 C3' A B 53 -32.311 40.579 128.629 1.00 12.52 C
ATOM 10 O3' A B 53 -31.736 40.072 129.814 1.00 12.52 O
ATOM 11 C2' A B 53 -33.594 39.862 128.236 1.00 12.52 C
ATOM 12 O2' A B 53 -34.387 39.589 129.379 1.00 12.52 O
ATOM 13 C1' A B 53 -34.299 40.924 127.385 1.00 12.52 C
ATOM 14 N9 A B 53 -34.154 40.670 125.939 1.00 13.01 N
ATOM 15 C8 A B 53 -33.648 41.468 124.941 1.00 13.01 C
ATOM 16 N7 A B 53 -33.664 40.921 123.742 1.00 13.01 N
ATOM 17 C5 A B 53 -34.221 39.698 123.990 1.00 13.01 C
ATOM 18 C6 A B 53 -34.510 38.657 123.134 1.00 13.01 C
ATOM 19 N6 A B 53 -34.263 38.726 121.831 1.00 13.01 N
ATOM 20 N1 A B 53 -35.078 37.554 123.685 1.00 13.01 N
ATOM 21 C2 A B 53 -35.320 37.525 125.005 1.00 13.01 C
ATOM 22 N3 A B 53 -35.085 38.451 125.918 1.00 13.01 N
ATOM 23 C4 A B 53 -34.533 39.517 125.324 1.00 13.01 C
ATOM 24 P U B 54 -30.675 38.867 129.761 1.00 17.74 P
ATOM 25 OP1 U B 54 -30.544 38.342 131.137 1.00 17.74 O
ATOM 26 OP2 U B 54 -29.466 39.393 129.076 1.00 17.74 O
ATOM 27 O5' U B 54 -31.402 37.780 128.868 1.00 17.74 O
TER
ATOM 2 P U A 366 -39.308 33.927 114.589 1.00 19.96 P
ATOM 3 OP1 U A 366 -39.891 32.565 114.630 1.00 19.96 O
ATOM 4 OP2 U A 366 -40.220 35.078 114.449 1.00 19.96 O
ATOM 5 O5' U A 366 -38.344 34.123 115.826 1.00 19.96 O
ATOM 6 C5' U A 366 -37.430 33.098 116.175 1.00 19.96 C
ATOM 7 C4' U A 366 -36.108 33.666 116.573 1.00 19.96 C
ATOM 8 O4' U A 366 -36.298 34.560 117.675 1.00 19.96 O
ATOM 9 C3' U A 366 -35.063 32.675 117.052 1.00 19.96 C
ATOM 10 O3' U A 366 -34.344 32.110 115.960 1.00 19.96 O
ATOM 11 C2' U A 366 -34.193 33.510 118.009 1.00 19.96 C
ATOM 12 O2' U A 366 -33.066 34.064 117.338 1.00 19.96 O
ATOM 13 C1' U A 366 -35.132 34.653 118.427 1.00 19.96 C
ATOM 14 N1 U A 366 -35.497 34.612 119.847 1.00 20.90 N
ATOM 15 C2 U A 366 -35.255 35.746 120.623 1.00 20.90 C
ATOM 16 O2 U A 366 -34.741 36.761 120.195 1.00 20.90 O
ATOM 17 N3 U A 366 -35.626 35.652 121.936 1.00 20.90 N
ATOM 18 C4 U A 366 -36.212 34.564 122.529 1.00 20.90 C
ATOM 19 O4 U A 366 -36.488 34.610 123.715 1.00 20.90 O
ATOM 20 C5 U A 366 -36.446 33.441 121.676 1.00 20.90 C
ATOM 21 C6 U A 366 -36.097 33.503 120.381 1.00 20.90 C
ATOM 22 P G A 367 -33.126 31.083 116.187 1.00 16.56 P
ATOM 23 OP1 G A 367 -33.102 30.722 117.621 1.00 16.56 O
ATOM 24 OP2 G A 367 -31.926 31.684 115.588 1.00 16.56 O
ATOM 25 O5' G A 367 -33.574 29.841 115.329 1.00 16.56 O
TER
ATOM 1 O3' C B 52 -29.658 45.067 127.299 1.00 13.81 O
ATOM 2 P A B 53 -29.535 43.478 127.358 1.00 12.52 P
ATOM 3 OP1 A B 53 -28.822 43.123 128.617 1.00 12.52 O
ATOM 4 OP2 A B 53 -28.948 43.057 126.061 1.00 12.52 O
ATOM 5 O5' A B 53 -31.049 43.021 127.451 1.00 12.52 O
ATOM 6 C5' A B 53 -31.727 43.076 128.681 1.00 12.52 C
ATOM 7 C4' A B 53 -32.780 42.015 128.772 1.00 12.52 C
ATOM 8 O4' A B 53 -33.722 42.173 127.689 1.00 12.52 O
ATOM 9 C3' A B 53 -32.311 40.579 128.629 1.00 12.52 C
ATOM 10 O3' A B 53 -31.736 40.072 129.814 1.00 12.52 O
ATOM 11 C2' A B 53 -33.594 39.862 128.236 1.00 12.52 C
ATOM 12 O2' A B 53 -34.387 39.589 129.379 1.00 12.52 O
ATOM 13 C1' A B 53 -34.299 40.924 127.385 1.00 12.52 C
ATOM 14 N9 A B 53 -34.154 40.670 125.939 1.00 13.01 N
ATOM 15 C8 A B 53 -33.648 41.468 124.941 1.00 13.01 C
ATOM 16 N7 A B 53 -33.664 40.921 123.742 1.00 13.01 N
ATOM 17 C5 A B 53 -34.221 39.698 123.990 1.00 13.01 C
ATOM 18 C6 A B 53 -34.510 38.657 123.134 1.00 13.01 C
ATOM 19 N6 A B 53 -34.263 38.726 121.831 1.00 13.01 N
ATOM 20 N1 A B 53 -35.078 37.554 123.685 1.00 13.01 N
ATOM 21 C2 A B 53 -35.320 37.525 125.005 1.00 13.01 C
ATOM 22 N3 A B 53 -35.085 38.451 125.918 1.00 13.01 N
ATOM 23 C4 A B 53 -34.533 39.517 125.324 1.00 13.01 C
ATOM 24 P U B 54 -30.675 38.867 129.761 1.00 17.74 P
ATOM 25 OP1 U B 54 -30.544 38.342 131.137 1.00 17.74 O
ATOM 26 OP2 U B 54 -29.466 39.393 129.076 1.00 17.74 O
ATOM 27 O5' U B 54 -31.402 37.780 128.868 1.00 17.74 O
TER
Atoms:
C4: (-36.212,34.564,122.529)
N3: (-35.626,35.652,121.936)
OP1: (-39.891,32.565,114.630)
OP2: (-40.220,35.078,114.449)
C2: (-35.255,35.746,120.623)
C1': (-35.132,34.653,118.427)
C3': (-35.063,32.675,117.052)
O5': (-38.344,34.123,115.826)
O4': (-36.298,34.560,117.675)
C5': (-37.430,33.098,116.175)
P: (-39.308,33.927,114.589)
C4': (-36.108,33.666,116.573)
C2': (-34.193,33.510,118.009)
O2': (-33.066,34.064,117.338)
N1: (-35.497,34.612,119.847)
O4: (-36.488,34.610,123.715)
O2: (-34.741,36.761,120.195)
C6: (-36.097,33.503,120.381)
C5: (-36.446,33.441,121.676)
O3': (-34.344,32.110,115.960)
N3: (-35.626,35.652,121.936)
OP1: (-39.891,32.565,114.630)
OP2: (-40.220,35.078,114.449)
C2: (-35.255,35.746,120.623)
C1': (-35.132,34.653,118.427)
C3': (-35.063,32.675,117.052)
O5': (-38.344,34.123,115.826)
O4': (-36.298,34.560,117.675)
C5': (-37.430,33.098,116.175)
P: (-39.308,33.927,114.589)
C4': (-36.108,33.666,116.573)
C2': (-34.193,33.510,118.009)
O2': (-33.066,34.064,117.338)
N1: (-35.497,34.612,119.847)
O4: (-36.488,34.610,123.715)
O2: (-34.741,36.761,120.195)
C6: (-36.097,33.503,120.381)
C5: (-36.446,33.441,121.676)
O3': (-34.344,32.110,115.960)
OP1: (-28.822,43.123,128.617)
OP2: (-28.948,43.057,126.061)
C3': (-32.311,40.579,128.629)
C1': (-34.299,40.924,127.385)
C5': (-31.727,43.076,128.681)
O4': (-33.722,42.173,127.689)
C8: (-33.648,41.468,124.941)
O2': (-34.387,39.589,129.379)
C6: (-34.510,38.657,123.134)
C5: (-34.221,39.698,123.990)
C4: (-34.533,39.517,125.324)
P: (-29.535,43.478,127.358)
C4': (-32.780,42.015,128.772)
C2': (-33.594,39.862,128.236)
C2: (-35.320,37.525,125.005)
N1: (-35.078,37.554,123.685)
N3: (-35.085,38.451,125.918)
N6: (-34.263,38.726,121.831)
N7: (-33.664,40.921,123.742)
N9: (-34.154,40.670,125.939)
O5': (-31.049,43.021,127.451)
O3': (-31.736,40.072,129.814)
OP2: (-28.948,43.057,126.061)
C3': (-32.311,40.579,128.629)
C1': (-34.299,40.924,127.385)
C5': (-31.727,43.076,128.681)
O4': (-33.722,42.173,127.689)
C8: (-33.648,41.468,124.941)
O2': (-34.387,39.589,129.379)
C6: (-34.510,38.657,123.134)
C5: (-34.221,39.698,123.990)
C4: (-34.533,39.517,125.324)
P: (-29.535,43.478,127.358)
C4': (-32.780,42.015,128.772)
C2': (-33.594,39.862,128.236)
C2: (-35.320,37.525,125.005)
N1: (-35.078,37.554,123.685)
N3: (-35.085,38.451,125.918)
N6: (-34.263,38.726,121.831)
N7: (-33.664,40.921,123.742)
N9: (-34.154,40.670,125.939)
O5': (-31.049,43.021,127.451)
O3': (-31.736,40.072,129.814)
Image (generated by PyMOL):