Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0250:0235
Extra
PDB:
ATOM 1 O3' A A 249 95.114 123.735 3.648 1.00 58.17 O
ATOM 2 P A A 250 96.669 123.753 4.046 1.00 58.82 P
ATOM 3 OP1 A A 250 96.769 123.700 5.520 1.00 58.69 O
ATOM 4 OP2 A A 250 97.313 124.866 3.314 1.00 61.38 O
ATOM 5 O5' A A 250 97.234 122.384 3.454 1.00 58.18 O
ATOM 6 C5' A A 250 96.884 121.960 2.123 1.00 57.22 C
ATOM 7 C4' A A 250 97.633 120.697 1.754 1.00 57.46 C
ATOM 8 O4' A A 250 97.219 120.279 0.421 1.00 58.86 O
ATOM 9 C3' A A 250 99.149 120.829 1.685 1.00 57.05 C
ATOM 10 O3' A A 250 99.729 119.558 1.967 1.00 55.12 O
ATOM 11 C2' A A 250 99.377 121.188 0.219 1.00 57.66 C
ATOM 12 O2' A A 250 100.672 120.877 -0.248 1.00 57.95 O
ATOM 13 C1' A A 250 98.331 120.305 -0.457 1.00 58.92 C
ATOM 14 N9 A A 250 97.873 120.779 -1.763 1.00 59.51 N
ATOM 15 C8 A A 250 98.036 120.152 -2.972 1.00 60.09 C
ATOM 16 N7 A A 250 97.484 120.790 -3.978 1.00 61.95 N
ATOM 17 C5 A A 250 96.926 121.921 -3.393 1.00 60.06 C
ATOM 18 C6 A A 250 96.191 123.003 -3.924 1.00 59.40 C
ATOM 19 N6 A A 250 95.881 123.132 -5.216 1.00 57.41 N
ATOM 20 N1 A A 250 95.782 123.963 -3.067 1.00 60.10 N
ATOM 21 C2 A A 250 96.097 123.841 -1.772 1.00 61.21 C
ATOM 22 N3 A A 250 96.781 122.875 -1.154 1.00 60.95 N
ATOM 23 C4 A A 250 97.169 121.933 -2.030 1.00 60.18 C
ATOM 24 P U A 251 100.910 119.434 3.050 1.00 55.47 P
ATOM 25 OP1 U A 251 101.714 120.683 3.108 1.00 51.68 O
ATOM 26 OP2 U A 251 101.591 118.139 2.789 1.00 53.80 O
ATOM 27 O5' U A 251 100.126 119.318 4.430 1.00 56.18 O
TER
ATOM 1 O3' G B 234 93.787 118.281 -7.802 1.00 67.05 O
ATOM 2 P A B 235 94.329 119.306 -8.910 1.00 65.98 P
ATOM 3 OP1 A B 235 93.928 118.781 -10.245 1.00 66.98 O
ATOM 4 OP2 A B 235 95.765 119.566 -8.621 1.00 63.52 O
ATOM 5 O5' A B 235 93.505 120.633 -8.632 1.00 64.68 O
ATOM 6 C5' A B 235 92.094 120.701 -8.902 1.00 64.82 C
ATOM 7 C4' A B 235 91.501 121.875 -8.169 1.00 65.63 C
ATOM 8 O4' A B 235 91.454 121.569 -6.744 1.00 64.38 O
ATOM 9 C3' A B 235 92.330 123.152 -8.296 1.00 65.00 C
ATOM 10 O3' A B 235 91.479 124.284 -8.218 1.00 66.02 O
ATOM 11 C2' A B 235 93.211 123.085 -7.054 1.00 64.52 C
ATOM 12 O2' A B 235 93.734 124.334 -6.651 1.00 63.58 O
ATOM 13 C1' A B 235 92.222 122.519 -6.036 1.00 64.05 C
ATOM 14 N9 A B 235 92.835 121.865 -4.882 1.00 62.70 N
ATOM 15 C8 A B 235 93.623 120.739 -4.839 1.00 62.88 C
ATOM 16 N7 A B 235 94.041 120.434 -3.634 1.00 61.63 N
ATOM 17 C5 A B 235 93.482 121.419 -2.829 1.00 61.64 C
ATOM 18 C6 A B 235 93.547 121.661 -1.450 1.00 60.66 C
ATOM 19 N6 A B 235 94.233 120.902 -0.598 1.00 59.97 N
ATOM 20 N1 A B 235 92.877 122.727 -0.969 1.00 61.26 N
ATOM 21 C2 A B 235 92.188 123.492 -1.823 1.00 61.78 C
ATOM 22 N3 A B 235 92.050 123.369 -3.136 1.00 61.99 N
ATOM 23 C4 A B 235 92.731 122.301 -3.584 1.00 61.97 C
ATOM 24 P A B 236 91.018 125.021 -9.559 1.00 67.62 P
ATOM 25 OP1 A B 236 92.114 124.848 -10.550 1.00 68.70 O
ATOM 26 OP2 A B 236 90.552 126.385 -9.196 1.00 65.79 O
ATOM 27 O5' A B 236 89.753 124.185 -10.045 1.00 66.66 O
TER
ATOM 2 P A A 250 96.669 123.753 4.046 1.00 58.82 P
ATOM 3 OP1 A A 250 96.769 123.700 5.520 1.00 58.69 O
ATOM 4 OP2 A A 250 97.313 124.866 3.314 1.00 61.38 O
ATOM 5 O5' A A 250 97.234 122.384 3.454 1.00 58.18 O
ATOM 6 C5' A A 250 96.884 121.960 2.123 1.00 57.22 C
ATOM 7 C4' A A 250 97.633 120.697 1.754 1.00 57.46 C
ATOM 8 O4' A A 250 97.219 120.279 0.421 1.00 58.86 O
ATOM 9 C3' A A 250 99.149 120.829 1.685 1.00 57.05 C
ATOM 10 O3' A A 250 99.729 119.558 1.967 1.00 55.12 O
ATOM 11 C2' A A 250 99.377 121.188 0.219 1.00 57.66 C
ATOM 12 O2' A A 250 100.672 120.877 -0.248 1.00 57.95 O
ATOM 13 C1' A A 250 98.331 120.305 -0.457 1.00 58.92 C
ATOM 14 N9 A A 250 97.873 120.779 -1.763 1.00 59.51 N
ATOM 15 C8 A A 250 98.036 120.152 -2.972 1.00 60.09 C
ATOM 16 N7 A A 250 97.484 120.790 -3.978 1.00 61.95 N
ATOM 17 C5 A A 250 96.926 121.921 -3.393 1.00 60.06 C
ATOM 18 C6 A A 250 96.191 123.003 -3.924 1.00 59.40 C
ATOM 19 N6 A A 250 95.881 123.132 -5.216 1.00 57.41 N
ATOM 20 N1 A A 250 95.782 123.963 -3.067 1.00 60.10 N
ATOM 21 C2 A A 250 96.097 123.841 -1.772 1.00 61.21 C
ATOM 22 N3 A A 250 96.781 122.875 -1.154 1.00 60.95 N
ATOM 23 C4 A A 250 97.169 121.933 -2.030 1.00 60.18 C
ATOM 24 P U A 251 100.910 119.434 3.050 1.00 55.47 P
ATOM 25 OP1 U A 251 101.714 120.683 3.108 1.00 51.68 O
ATOM 26 OP2 U A 251 101.591 118.139 2.789 1.00 53.80 O
ATOM 27 O5' U A 251 100.126 119.318 4.430 1.00 56.18 O
TER
ATOM 1 O3' G B 234 93.787 118.281 -7.802 1.00 67.05 O
ATOM 2 P A B 235 94.329 119.306 -8.910 1.00 65.98 P
ATOM 3 OP1 A B 235 93.928 118.781 -10.245 1.00 66.98 O
ATOM 4 OP2 A B 235 95.765 119.566 -8.621 1.00 63.52 O
ATOM 5 O5' A B 235 93.505 120.633 -8.632 1.00 64.68 O
ATOM 6 C5' A B 235 92.094 120.701 -8.902 1.00 64.82 C
ATOM 7 C4' A B 235 91.501 121.875 -8.169 1.00 65.63 C
ATOM 8 O4' A B 235 91.454 121.569 -6.744 1.00 64.38 O
ATOM 9 C3' A B 235 92.330 123.152 -8.296 1.00 65.00 C
ATOM 10 O3' A B 235 91.479 124.284 -8.218 1.00 66.02 O
ATOM 11 C2' A B 235 93.211 123.085 -7.054 1.00 64.52 C
ATOM 12 O2' A B 235 93.734 124.334 -6.651 1.00 63.58 O
ATOM 13 C1' A B 235 92.222 122.519 -6.036 1.00 64.05 C
ATOM 14 N9 A B 235 92.835 121.865 -4.882 1.00 62.70 N
ATOM 15 C8 A B 235 93.623 120.739 -4.839 1.00 62.88 C
ATOM 16 N7 A B 235 94.041 120.434 -3.634 1.00 61.63 N
ATOM 17 C5 A B 235 93.482 121.419 -2.829 1.00 61.64 C
ATOM 18 C6 A B 235 93.547 121.661 -1.450 1.00 60.66 C
ATOM 19 N6 A B 235 94.233 120.902 -0.598 1.00 59.97 N
ATOM 20 N1 A B 235 92.877 122.727 -0.969 1.00 61.26 N
ATOM 21 C2 A B 235 92.188 123.492 -1.823 1.00 61.78 C
ATOM 22 N3 A B 235 92.050 123.369 -3.136 1.00 61.99 N
ATOM 23 C4 A B 235 92.731 122.301 -3.584 1.00 61.97 C
ATOM 24 P A B 236 91.018 125.021 -9.559 1.00 67.62 P
ATOM 25 OP1 A B 236 92.114 124.848 -10.550 1.00 68.70 O
ATOM 26 OP2 A B 236 90.552 126.385 -9.196 1.00 65.79 O
ATOM 27 O5' A B 236 89.753 124.185 -10.045 1.00 66.66 O
TER
Atoms:
OP1: (96.769,123.700,5.520)
OP2: (97.313,124.866,3.314)
C3': (99.149,120.829,1.685)
C1': (98.331,120.305,-0.457)
C5': (96.884,121.960,2.123)
O4': (97.219,120.279,0.421)
C8: (98.036,120.152,-2.972)
O2': (100.672,120.877,-0.248)
C6: (96.191,123.003,-3.924)
C5: (96.926,121.921,-3.393)
C4: (97.169,121.933,-2.030)
P: (96.669,123.753,4.046)
C4': (97.633,120.697,1.754)
C2': (99.377,121.188,0.219)
C2: (96.097,123.841,-1.772)
N1: (95.782,123.963,-3.067)
N3: (96.781,122.875,-1.154)
N6: (95.881,123.132,-5.216)
N7: (97.484,120.790,-3.978)
N9: (97.873,120.779,-1.763)
O5': (97.234,122.384,3.454)
O3': (99.729,119.558,1.967)
OP2: (97.313,124.866,3.314)
C3': (99.149,120.829,1.685)
C1': (98.331,120.305,-0.457)
C5': (96.884,121.960,2.123)
O4': (97.219,120.279,0.421)
C8: (98.036,120.152,-2.972)
O2': (100.672,120.877,-0.248)
C6: (96.191,123.003,-3.924)
C5: (96.926,121.921,-3.393)
C4: (97.169,121.933,-2.030)
P: (96.669,123.753,4.046)
C4': (97.633,120.697,1.754)
C2': (99.377,121.188,0.219)
C2: (96.097,123.841,-1.772)
N1: (95.782,123.963,-3.067)
N3: (96.781,122.875,-1.154)
N6: (95.881,123.132,-5.216)
N7: (97.484,120.790,-3.978)
N9: (97.873,120.779,-1.763)
O5': (97.234,122.384,3.454)
O3': (99.729,119.558,1.967)
OP1: (93.928,118.781,-10.245)
OP2: (95.765,119.566,-8.621)
C3': (92.330,123.152,-8.296)
C1': (92.222,122.519,-6.036)
C5': (92.094,120.701,-8.902)
O4': (91.454,121.569,-6.744)
C8: (93.623,120.739,-4.839)
O2': (93.734,124.334,-6.651)
C6: (93.547,121.661,-1.450)
C5: (93.482,121.419,-2.829)
C4: (92.731,122.301,-3.584)
P: (94.329,119.306,-8.910)
C4': (91.501,121.875,-8.169)
C2': (93.211,123.085,-7.054)
C2: (92.188,123.492,-1.823)
N1: (92.877,122.727,-0.969)
N3: (92.050,123.369,-3.136)
N6: (94.233,120.902,-0.598)
N7: (94.041,120.434,-3.634)
N9: (92.835,121.865,-4.882)
O5': (93.505,120.633,-8.632)
O3': (91.479,124.284,-8.218)
OP2: (95.765,119.566,-8.621)
C3': (92.330,123.152,-8.296)
C1': (92.222,122.519,-6.036)
C5': (92.094,120.701,-8.902)
O4': (91.454,121.569,-6.744)
C8: (93.623,120.739,-4.839)
O2': (93.734,124.334,-6.651)
C6: (93.547,121.661,-1.450)
C5: (93.482,121.419,-2.829)
C4: (92.731,122.301,-3.584)
P: (94.329,119.306,-8.910)
C4': (91.501,121.875,-8.169)
C2': (93.211,123.085,-7.054)
C2: (92.188,123.492,-1.823)
N1: (92.877,122.727,-0.969)
N3: (92.050,123.369,-3.136)
N6: (94.233,120.902,-0.598)
N7: (94.041,120.434,-3.634)
N9: (92.835,121.865,-4.882)
O5': (93.505,120.633,-8.632)
O3': (91.479,124.284,-8.218)
Image (generated by PyMOL):