Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2605:A2005
Extra
PDB:
ATOM 1 O3' C A2604 -28.685 116.622 176.931 1.00 0.01 O
ATOM 2 P U A2605 -28.508 115.027 177.140 1.00 0.01 P
ATOM 3 OP1 U A2605 -28.080 114.471 175.837 1.00 0.01 O
ATOM 4 OP2 U A2605 -29.766 114.505 177.769 1.00 0.01 O
ATOM 5 O5' U A2605 -27.294 114.972 178.194 1.00 0.01 O
ATOM 6 C5' U A2605 -27.026 113.813 178.982 1.00 0.01 C
ATOM 7 C4' U A2605 -26.785 114.167 180.429 1.00 0.01 C
ATOM 8 O4' U A2605 -25.520 114.858 180.571 1.00 0.01 O
ATOM 9 C3' U A2605 -27.826 115.088 181.042 1.00 0.01 C
ATOM 10 O3' U A2605 -28.011 114.735 182.395 1.00 0.01 O
ATOM 11 C2' U A2605 -27.164 116.439 180.968 1.00 0.01 C
ATOM 12 O2' U A2605 -27.664 117.390 181.881 1.00 0.01 O
ATOM 13 C1' U A2605 -25.734 116.057 181.274 1.00 0.01 C
ATOM 14 N1 U A2605 -24.773 117.045 180.831 1.00 0.01 N
ATOM 15 C2 U A2605 -24.054 117.695 181.784 1.00 0.01 C
ATOM 16 O2 U A2605 -24.140 117.419 182.968 1.00 0.01 O
ATOM 17 N3 U A2605 -23.212 118.650 181.277 1.00 0.01 N
ATOM 18 C4 U A2605 -23.059 119.009 179.955 1.00 0.01 C
ATOM 19 O4 U A2605 -22.271 119.886 179.620 1.00 0.01 O
ATOM 20 C5 U A2605 -23.871 118.305 179.058 1.00 0.01 C
ATOM 21 C6 U A2605 -24.687 117.378 179.526 1.00 0.01 C
ATOM 22 P A A2606 -28.789 113.389 182.742 1.00 0.10 P
ATOM 23 OP1 A A2606 -28.145 112.811 183.957 1.00 0.10 O
ATOM 24 OP2 A A2606 -28.838 112.574 181.506 1.00 0.10 O
ATOM 25 O5' A A2606 -30.234 113.919 183.062 1.00 0.10 O
TER
ATOM 1 O3' G B2004 -17.045 125.211 190.930 1.00 0.01 O
ATOM 2 P A B2005 -18.556 125.571 191.267 1.00 0.01 P
ATOM 3 OP1 A B2005 -18.802 126.958 190.817 1.00 0.01 O
ATOM 4 OP2 A B2005 -18.771 125.241 192.685 1.00 0.01 O
ATOM 5 O5' A B2005 -19.369 124.577 190.369 1.00 0.01 O
ATOM 6 C5' A B2005 -20.520 125.025 189.675 1.00 0.01 C
ATOM 7 C4' A B2005 -20.170 125.491 188.279 1.00 0.01 C
ATOM 8 O4' A B2005 -19.499 124.417 187.559 1.00 0.01 O
ATOM 9 C3' A B2005 -21.346 125.880 187.396 1.00 0.01 C
ATOM 10 O3' A B2005 -21.740 127.227 187.577 1.00 0.01 O
ATOM 11 C2' A B2005 -20.845 125.564 185.990 1.00 0.01 C
ATOM 12 O2' A B2005 -20.008 126.599 185.500 1.00 0.01 O
ATOM 13 C1' A B2005 -19.988 124.327 186.242 1.00 0.01 C
ATOM 14 N9 A B2005 -20.770 123.089 186.143 1.00 0.01 N
ATOM 15 C8 A B2005 -21.051 122.227 187.174 1.00 0.01 C
ATOM 16 N7 A B2005 -21.777 121.192 186.844 1.00 0.01 N
ATOM 17 C5 A B2005 -21.981 121.414 185.510 1.00 0.01 C
ATOM 18 C6 A B2005 -22.679 120.672 184.602 1.00 0.01 C
ATOM 19 N6 A B2005 -23.295 119.557 184.938 1.00 0.01 N
ATOM 20 N1 A B2005 -22.691 121.120 183.339 1.00 0.01 N
ATOM 21 C2 A B2005 -22.044 122.263 183.042 1.00 0.01 C
ATOM 22 N3 A B2005 -21.356 123.060 183.846 1.00 0.01 N
ATOM 23 C4 A B2005 -21.371 122.560 185.066 1.00 0.01 C
ATOM 24 P A B2006 -23.075 127.767 186.863 1.00 0.09 P
ATOM 25 OP1 A B2006 -22.830 129.178 186.452 1.00 0.09 O
ATOM 26 OP2 A B2006 -24.223 127.473 187.781 1.00 0.09 O
ATOM 27 O5' A B2006 -23.166 126.855 185.564 1.00 0.09 O
TER
ATOM 2 P U A2605 -28.508 115.027 177.140 1.00 0.01 P
ATOM 3 OP1 U A2605 -28.080 114.471 175.837 1.00 0.01 O
ATOM 4 OP2 U A2605 -29.766 114.505 177.769 1.00 0.01 O
ATOM 5 O5' U A2605 -27.294 114.972 178.194 1.00 0.01 O
ATOM 6 C5' U A2605 -27.026 113.813 178.982 1.00 0.01 C
ATOM 7 C4' U A2605 -26.785 114.167 180.429 1.00 0.01 C
ATOM 8 O4' U A2605 -25.520 114.858 180.571 1.00 0.01 O
ATOM 9 C3' U A2605 -27.826 115.088 181.042 1.00 0.01 C
ATOM 10 O3' U A2605 -28.011 114.735 182.395 1.00 0.01 O
ATOM 11 C2' U A2605 -27.164 116.439 180.968 1.00 0.01 C
ATOM 12 O2' U A2605 -27.664 117.390 181.881 1.00 0.01 O
ATOM 13 C1' U A2605 -25.734 116.057 181.274 1.00 0.01 C
ATOM 14 N1 U A2605 -24.773 117.045 180.831 1.00 0.01 N
ATOM 15 C2 U A2605 -24.054 117.695 181.784 1.00 0.01 C
ATOM 16 O2 U A2605 -24.140 117.419 182.968 1.00 0.01 O
ATOM 17 N3 U A2605 -23.212 118.650 181.277 1.00 0.01 N
ATOM 18 C4 U A2605 -23.059 119.009 179.955 1.00 0.01 C
ATOM 19 O4 U A2605 -22.271 119.886 179.620 1.00 0.01 O
ATOM 20 C5 U A2605 -23.871 118.305 179.058 1.00 0.01 C
ATOM 21 C6 U A2605 -24.687 117.378 179.526 1.00 0.01 C
ATOM 22 P A A2606 -28.789 113.389 182.742 1.00 0.10 P
ATOM 23 OP1 A A2606 -28.145 112.811 183.957 1.00 0.10 O
ATOM 24 OP2 A A2606 -28.838 112.574 181.506 1.00 0.10 O
ATOM 25 O5' A A2606 -30.234 113.919 183.062 1.00 0.10 O
TER
ATOM 1 O3' G B2004 -17.045 125.211 190.930 1.00 0.01 O
ATOM 2 P A B2005 -18.556 125.571 191.267 1.00 0.01 P
ATOM 3 OP1 A B2005 -18.802 126.958 190.817 1.00 0.01 O
ATOM 4 OP2 A B2005 -18.771 125.241 192.685 1.00 0.01 O
ATOM 5 O5' A B2005 -19.369 124.577 190.369 1.00 0.01 O
ATOM 6 C5' A B2005 -20.520 125.025 189.675 1.00 0.01 C
ATOM 7 C4' A B2005 -20.170 125.491 188.279 1.00 0.01 C
ATOM 8 O4' A B2005 -19.499 124.417 187.559 1.00 0.01 O
ATOM 9 C3' A B2005 -21.346 125.880 187.396 1.00 0.01 C
ATOM 10 O3' A B2005 -21.740 127.227 187.577 1.00 0.01 O
ATOM 11 C2' A B2005 -20.845 125.564 185.990 1.00 0.01 C
ATOM 12 O2' A B2005 -20.008 126.599 185.500 1.00 0.01 O
ATOM 13 C1' A B2005 -19.988 124.327 186.242 1.00 0.01 C
ATOM 14 N9 A B2005 -20.770 123.089 186.143 1.00 0.01 N
ATOM 15 C8 A B2005 -21.051 122.227 187.174 1.00 0.01 C
ATOM 16 N7 A B2005 -21.777 121.192 186.844 1.00 0.01 N
ATOM 17 C5 A B2005 -21.981 121.414 185.510 1.00 0.01 C
ATOM 18 C6 A B2005 -22.679 120.672 184.602 1.00 0.01 C
ATOM 19 N6 A B2005 -23.295 119.557 184.938 1.00 0.01 N
ATOM 20 N1 A B2005 -22.691 121.120 183.339 1.00 0.01 N
ATOM 21 C2 A B2005 -22.044 122.263 183.042 1.00 0.01 C
ATOM 22 N3 A B2005 -21.356 123.060 183.846 1.00 0.01 N
ATOM 23 C4 A B2005 -21.371 122.560 185.066 1.00 0.01 C
ATOM 24 P A B2006 -23.075 127.767 186.863 1.00 0.09 P
ATOM 25 OP1 A B2006 -22.830 129.178 186.452 1.00 0.09 O
ATOM 26 OP2 A B2006 -24.223 127.473 187.781 1.00 0.09 O
ATOM 27 O5' A B2006 -23.166 126.855 185.564 1.00 0.09 O
TER
Atoms:
C4: (-23.059,119.009,179.955)
N3: (-23.212,118.650,181.277)
OP1: (-28.080,114.471,175.837)
OP2: (-29.766,114.505,177.769)
C2: (-24.054,117.695,181.784)
C1': (-25.734,116.057,181.274)
C3': (-27.826,115.088,181.042)
O5': (-27.294,114.972,178.194)
O4': (-25.520,114.858,180.571)
C5': (-27.026,113.813,178.982)
P: (-28.508,115.027,177.140)
C4': (-26.785,114.167,180.429)
C2': (-27.164,116.439,180.968)
O2': (-27.664,117.390,181.881)
N1: (-24.773,117.045,180.831)
O4: (-22.271,119.886,179.620)
O2: (-24.140,117.419,182.968)
C6: (-24.687,117.378,179.526)
C5: (-23.871,118.305,179.058)
O3': (-28.011,114.735,182.395)
N3: (-23.212,118.650,181.277)
OP1: (-28.080,114.471,175.837)
OP2: (-29.766,114.505,177.769)
C2: (-24.054,117.695,181.784)
C1': (-25.734,116.057,181.274)
C3': (-27.826,115.088,181.042)
O5': (-27.294,114.972,178.194)
O4': (-25.520,114.858,180.571)
C5': (-27.026,113.813,178.982)
P: (-28.508,115.027,177.140)
C4': (-26.785,114.167,180.429)
C2': (-27.164,116.439,180.968)
O2': (-27.664,117.390,181.881)
N1: (-24.773,117.045,180.831)
O4: (-22.271,119.886,179.620)
O2: (-24.140,117.419,182.968)
C6: (-24.687,117.378,179.526)
C5: (-23.871,118.305,179.058)
O3': (-28.011,114.735,182.395)
OP1: (-18.802,126.958,190.817)
OP2: (-18.771,125.241,192.685)
C3': (-21.346,125.880,187.396)
C1': (-19.988,124.327,186.242)
C5': (-20.520,125.025,189.675)
O4': (-19.499,124.417,187.559)
C8: (-21.051,122.227,187.174)
O2': (-20.008,126.599,185.500)
C6: (-22.679,120.672,184.602)
C5: (-21.981,121.414,185.510)
C4: (-21.371,122.560,185.066)
P: (-18.556,125.571,191.267)
C4': (-20.170,125.491,188.279)
C2': (-20.845,125.564,185.990)
C2: (-22.044,122.263,183.042)
N1: (-22.691,121.120,183.339)
N3: (-21.356,123.060,183.846)
N6: (-23.295,119.557,184.938)
N7: (-21.777,121.192,186.844)
N9: (-20.770,123.089,186.143)
O5': (-19.369,124.577,190.369)
O3': (-21.740,127.227,187.577)
OP2: (-18.771,125.241,192.685)
C3': (-21.346,125.880,187.396)
C1': (-19.988,124.327,186.242)
C5': (-20.520,125.025,189.675)
O4': (-19.499,124.417,187.559)
C8: (-21.051,122.227,187.174)
O2': (-20.008,126.599,185.500)
C6: (-22.679,120.672,184.602)
C5: (-21.981,121.414,185.510)
C4: (-21.371,122.560,185.066)
P: (-18.556,125.571,191.267)
C4': (-20.170,125.491,188.279)
C2': (-20.845,125.564,185.990)
C2: (-22.044,122.263,183.042)
N1: (-22.691,121.120,183.339)
N3: (-21.356,123.060,183.846)
N6: (-23.295,119.557,184.938)
N7: (-21.777,121.192,186.844)
N9: (-20.770,123.089,186.143)
O5': (-19.369,124.577,190.369)
O3': (-21.740,127.227,187.577)
Image (generated by PyMOL):