Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2606:A2006
Extra
PDB:
ATOM 1 O3' C A2605 -55.330 -66.579 -2.868 1.00 0.01 O
ATOM 2 P U A2606 -54.825 -66.492 -4.369 1.00 0.01 P
ATOM 3 OP1 U A2606 -54.606 -65.083 -4.655 1.00 0.01 O
ATOM 4 OP2 U A2606 -55.771 -67.265 -5.189 1.00 0.01 O
ATOM 5 O5' U A2606 -53.445 -67.232 -4.332 1.00 0.01 O
ATOM 6 C5' U A2606 -52.846 -67.687 -5.524 1.00 0.01 C
ATOM 7 C4' U A2606 -52.216 -69.038 -5.336 1.00 0.01 C
ATOM 8 O4' U A2606 -51.135 -68.946 -4.366 1.00 0.01 O
ATOM 9 C3' U A2606 -53.148 -70.126 -4.816 1.00 0.01 C
ATOM 10 O3' U A2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 11 C2' U A2606 -52.830 -70.132 -3.335 1.00 0.01 C
ATOM 12 O2' U A2606 -53.168 -71.320 -2.671 1.00 0.01 O
ATOM 13 C1' U A2606 -51.331 -69.917 -3.380 1.00 0.01 C
ATOM 14 N1 U A2606 -50.747 -69.437 -2.137 1.00 0.01 N
ATOM 15 C2 U A2606 -50.136 -70.399 -1.400 1.00 0.01 C
ATOM 16 O2 U A2606 -50.119 -71.560 -1.779 1.00 0.01 O
ATOM 17 N3 U A2606 -49.577 -69.960 -0.241 1.00 0.01 N
ATOM 18 C4 U A2606 -49.580 -68.680 0.246 1.00 0.01 C
ATOM 19 O4 U A2606 -49.038 -68.438 1.327 1.00 0.01 O
ATOM 20 C5 U A2606 -50.238 -67.727 -0.572 1.00 0.01 C
ATOM 21 C6 U A2606 -50.782 -68.137 -1.720 1.00 0.01 C
ATOM 22 P A A2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 23 OP1 A A2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 24 OP2 A A2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 25 O5' A A2607 -54.853 -72.486 -5.845 1.00 0.01 O
TER
ATOM 1 O3' G B2005 -42.084 -78.299 6.648 1.00 0.01 O
ATOM 2 P A B2006 -43.527 -78.976 6.655 1.00 0.01 P
ATOM 3 OP1 A B2006 -44.042 -78.899 8.033 1.00 0.01 O
ATOM 4 OP2 A B2006 -43.378 -80.308 6.021 1.00 0.01 O
ATOM 5 O5' A B2006 -44.366 -78.012 5.728 1.00 0.01 O
ATOM 6 C5' A B2006 -45.660 -77.579 6.119 1.00 0.01 C
ATOM 7 C4' A B2006 -45.653 -76.127 6.524 1.00 0.01 C
ATOM 8 O4' A B2006 -44.971 -75.360 5.514 1.00 0.01 O
ATOM 9 C3' A B2006 -47.014 -75.447 6.659 1.00 0.01 C
ATOM 10 O3' A B2006 -47.597 -75.626 7.930 1.00 0.01 O
ATOM 11 C2' A B2006 -46.665 -74.019 6.389 1.00 0.01 C
ATOM 12 O2' A B2006 -46.007 -73.473 7.497 1.00 0.01 O
ATOM 13 C1' A B2006 -45.650 -74.168 5.285 1.00 0.01 C
ATOM 14 N9 A B2006 -46.294 -74.268 3.987 1.00 0.01 N
ATOM 15 C8 A B2006 -46.267 -75.330 3.152 1.00 0.01 C
ATOM 16 N7 A B2006 -46.960 -75.145 2.070 1.00 0.01 N
ATOM 17 C5 A B2006 -47.464 -73.872 2.220 1.00 0.01 C
ATOM 18 C6 A B2006 -48.264 -73.094 1.403 1.00 0.01 C
ATOM 19 N6 A B2006 -48.730 -73.447 0.232 1.00 0.01 N
ATOM 20 N1 A B2006 -48.575 -71.895 1.865 1.00 0.01 N
ATOM 21 C2 A B2006 -48.110 -71.493 3.052 1.00 0.01 C
ATOM 22 N3 A B2006 -47.345 -72.120 3.907 1.00 0.01 N
ATOM 23 C4 A B2006 -47.066 -73.320 3.412 1.00 0.01 C
ATOM 24 P A B2007 -49.086 -76.191 8.084 1.00 0.01 P
ATOM 25 OP1 A B2007 -49.320 -76.445 9.503 1.00 0.01 O
ATOM 26 OP2 A B2007 -49.215 -77.318 7.150 1.00 0.01 O
ATOM 27 O5' A B2007 -49.964 -74.963 7.609 1.00 0.01 O
TER
ATOM 2 P U A2606 -54.825 -66.492 -4.369 1.00 0.01 P
ATOM 3 OP1 U A2606 -54.606 -65.083 -4.655 1.00 0.01 O
ATOM 4 OP2 U A2606 -55.771 -67.265 -5.189 1.00 0.01 O
ATOM 5 O5' U A2606 -53.445 -67.232 -4.332 1.00 0.01 O
ATOM 6 C5' U A2606 -52.846 -67.687 -5.524 1.00 0.01 C
ATOM 7 C4' U A2606 -52.216 -69.038 -5.336 1.00 0.01 C
ATOM 8 O4' U A2606 -51.135 -68.946 -4.366 1.00 0.01 O
ATOM 9 C3' U A2606 -53.148 -70.126 -4.816 1.00 0.01 C
ATOM 10 O3' U A2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 11 C2' U A2606 -52.830 -70.132 -3.335 1.00 0.01 C
ATOM 12 O2' U A2606 -53.168 -71.320 -2.671 1.00 0.01 O
ATOM 13 C1' U A2606 -51.331 -69.917 -3.380 1.00 0.01 C
ATOM 14 N1 U A2606 -50.747 -69.437 -2.137 1.00 0.01 N
ATOM 15 C2 U A2606 -50.136 -70.399 -1.400 1.00 0.01 C
ATOM 16 O2 U A2606 -50.119 -71.560 -1.779 1.00 0.01 O
ATOM 17 N3 U A2606 -49.577 -69.960 -0.241 1.00 0.01 N
ATOM 18 C4 U A2606 -49.580 -68.680 0.246 1.00 0.01 C
ATOM 19 O4 U A2606 -49.038 -68.438 1.327 1.00 0.01 O
ATOM 20 C5 U A2606 -50.238 -67.727 -0.572 1.00 0.01 C
ATOM 21 C6 U A2606 -50.782 -68.137 -1.720 1.00 0.01 C
ATOM 22 P A A2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 23 OP1 A A2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 24 OP2 A A2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 25 O5' A A2607 -54.853 -72.486 -5.845 1.00 0.01 O
TER
ATOM 1 O3' G B2005 -42.084 -78.299 6.648 1.00 0.01 O
ATOM 2 P A B2006 -43.527 -78.976 6.655 1.00 0.01 P
ATOM 3 OP1 A B2006 -44.042 -78.899 8.033 1.00 0.01 O
ATOM 4 OP2 A B2006 -43.378 -80.308 6.021 1.00 0.01 O
ATOM 5 O5' A B2006 -44.366 -78.012 5.728 1.00 0.01 O
ATOM 6 C5' A B2006 -45.660 -77.579 6.119 1.00 0.01 C
ATOM 7 C4' A B2006 -45.653 -76.127 6.524 1.00 0.01 C
ATOM 8 O4' A B2006 -44.971 -75.360 5.514 1.00 0.01 O
ATOM 9 C3' A B2006 -47.014 -75.447 6.659 1.00 0.01 C
ATOM 10 O3' A B2006 -47.597 -75.626 7.930 1.00 0.01 O
ATOM 11 C2' A B2006 -46.665 -74.019 6.389 1.00 0.01 C
ATOM 12 O2' A B2006 -46.007 -73.473 7.497 1.00 0.01 O
ATOM 13 C1' A B2006 -45.650 -74.168 5.285 1.00 0.01 C
ATOM 14 N9 A B2006 -46.294 -74.268 3.987 1.00 0.01 N
ATOM 15 C8 A B2006 -46.267 -75.330 3.152 1.00 0.01 C
ATOM 16 N7 A B2006 -46.960 -75.145 2.070 1.00 0.01 N
ATOM 17 C5 A B2006 -47.464 -73.872 2.220 1.00 0.01 C
ATOM 18 C6 A B2006 -48.264 -73.094 1.403 1.00 0.01 C
ATOM 19 N6 A B2006 -48.730 -73.447 0.232 1.00 0.01 N
ATOM 20 N1 A B2006 -48.575 -71.895 1.865 1.00 0.01 N
ATOM 21 C2 A B2006 -48.110 -71.493 3.052 1.00 0.01 C
ATOM 22 N3 A B2006 -47.345 -72.120 3.907 1.00 0.01 N
ATOM 23 C4 A B2006 -47.066 -73.320 3.412 1.00 0.01 C
ATOM 24 P A B2007 -49.086 -76.191 8.084 1.00 0.01 P
ATOM 25 OP1 A B2007 -49.320 -76.445 9.503 1.00 0.01 O
ATOM 26 OP2 A B2007 -49.215 -77.318 7.150 1.00 0.01 O
ATOM 27 O5' A B2007 -49.964 -74.963 7.609 1.00 0.01 O
TER
Atoms:
C4: (-49.580,-68.680,0.246)
N3: (-49.577,-69.960,-0.241)
OP1: (-54.606,-65.083,-4.655)
OP2: (-55.771,-67.265,-5.189)
C2: (-50.136,-70.399,-1.400)
C1': (-51.331,-69.917,-3.380)
C3': (-53.148,-70.126,-4.816)
O5': (-53.445,-67.232,-4.332)
O4': (-51.135,-68.946,-4.366)
C5': (-52.846,-67.687,-5.524)
P: (-54.825,-66.492,-4.369)
C4': (-52.216,-69.038,-5.336)
C2': (-52.830,-70.132,-3.335)
O2': (-53.168,-71.320,-2.671)
N1: (-50.747,-69.437,-2.137)
O4: (-49.038,-68.438,1.327)
O2: (-50.119,-71.560,-1.779)
C6: (-50.782,-68.137,-1.720)
C5: (-50.238,-67.727,-0.572)
O3': (-52.756,-71.365,-5.374)
N3: (-49.577,-69.960,-0.241)
OP1: (-54.606,-65.083,-4.655)
OP2: (-55.771,-67.265,-5.189)
C2: (-50.136,-70.399,-1.400)
C1': (-51.331,-69.917,-3.380)
C3': (-53.148,-70.126,-4.816)
O5': (-53.445,-67.232,-4.332)
O4': (-51.135,-68.946,-4.366)
C5': (-52.846,-67.687,-5.524)
P: (-54.825,-66.492,-4.369)
C4': (-52.216,-69.038,-5.336)
C2': (-52.830,-70.132,-3.335)
O2': (-53.168,-71.320,-2.671)
N1: (-50.747,-69.437,-2.137)
O4: (-49.038,-68.438,1.327)
O2: (-50.119,-71.560,-1.779)
C6: (-50.782,-68.137,-1.720)
C5: (-50.238,-67.727,-0.572)
O3': (-52.756,-71.365,-5.374)
OP1: (-44.042,-78.899,8.033)
OP2: (-43.378,-80.308,6.021)
C3': (-47.014,-75.447,6.659)
C1': (-45.650,-74.168,5.285)
C5': (-45.660,-77.579,6.119)
O4': (-44.971,-75.360,5.514)
C8: (-46.267,-75.330,3.152)
O2': (-46.007,-73.473,7.497)
C6: (-48.264,-73.094,1.403)
C5: (-47.464,-73.872,2.220)
C4: (-47.066,-73.320,3.412)
P: (-43.527,-78.976,6.655)
C4': (-45.653,-76.127,6.524)
C2': (-46.665,-74.019,6.389)
C2: (-48.110,-71.493,3.052)
N1: (-48.575,-71.895,1.865)
N3: (-47.345,-72.120,3.907)
N6: (-48.730,-73.447,0.232)
N7: (-46.960,-75.145,2.070)
N9: (-46.294,-74.268,3.987)
O5': (-44.366,-78.012,5.728)
O3': (-47.597,-75.626,7.930)
OP2: (-43.378,-80.308,6.021)
C3': (-47.014,-75.447,6.659)
C1': (-45.650,-74.168,5.285)
C5': (-45.660,-77.579,6.119)
O4': (-44.971,-75.360,5.514)
C8: (-46.267,-75.330,3.152)
O2': (-46.007,-73.473,7.497)
C6: (-48.264,-73.094,1.403)
C5: (-47.464,-73.872,2.220)
C4: (-47.066,-73.320,3.412)
P: (-43.527,-78.976,6.655)
C4': (-45.653,-76.127,6.524)
C2': (-46.665,-74.019,6.389)
C2: (-48.110,-71.493,3.052)
N1: (-48.575,-71.895,1.865)
N3: (-47.345,-72.120,3.907)
N6: (-48.730,-73.447,0.232)
N7: (-46.960,-75.145,2.070)
N9: (-46.294,-74.268,3.987)
O5': (-44.366,-78.012,5.728)
O3': (-47.597,-75.626,7.930)
Image (generated by PyMOL):