ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VTQ:A46:A14

Extra

PDB:
ATOM 1 O3' A A 45 6.097 5.848 4.814 1.00 1.00 O
ATOM 2 P U A 46 5.295 6.141 6.174 1.00 1.00 P
ATOM 3 OP1 U A 46 5.120 4.855 6.922 1.00 1.00 O
ATOM 4 OP2 U A 46 3.944 6.603 5.756 1.00 1.00 O
ATOM 5 O5' U A 46 6.229 7.201 6.892 1.00 1.00 O
ATOM 6 C5' U A 46 7.279 6.875 7.834 1.00 1.00 C
ATOM 7 C4' U A 46 8.593 7.310 7.206 1.00 1.00 C
ATOM 8 O4' U A 46 8.442 8.623 6.728 1.00 1.00 O
ATOM 9 C3' U A 46 9.805 7.365 8.148 1.00 1.00 C
ATOM 10 O3' U A 46 11.053 7.079 7.475 1.00 1.00 O
ATOM 11 C2' U A 46 9.829 8.833 8.581 1.00 1.00 C
ATOM 12 O2' U A 46 11.102 9.167 9.030 1.00 1.00 O
ATOM 13 C1' U A 46 9.480 9.479 7.296 1.00 1.00 C
ATOM 14 N1 U A 46 8.919 10.833 7.385 1.00 1.00 N
ATOM 15 C2 U A 46 9.751 11.846 6.937 1.00 1.00 C
ATOM 16 O2 U A 46 10.873 11.587 6.533 1.00 1.00 O
ATOM 17 N3 U A 46 9.275 13.124 6.982 1.00 1.00 N
ATOM 18 C4 U A 46 8.020 13.403 7.430 1.00 1.00 C
ATOM 19 O4 U A 46 7.671 14.620 7.430 1.00 1.00 O
ATOM 20 C5 U A 46 7.182 12.342 7.879 1.00 1.00 C
ATOM 21 C6 U A 46 7.665 11.091 7.834 1.00 1.00 C
TER

ATOM 1 O3' A B 13 16.263 19.570 1.360 1.00 1.00 O
ATOM 2 P A B 14 17.391 19.353 2.497 1.00 1.00 P
ATOM 3 OP1 A B 14 18.609 20.189 2.272 1.00 1.00 O
ATOM 4 OP2 A B 14 17.711 17.898 2.407 1.00 1.00 O
ATOM 5 O5' A B 14 16.571 19.761 3.812 1.00 1.00 O
ATOM 6 C5' A B 14 16.209 21.155 4.007 1.00 1.00 C
ATOM 7 C4' A B 14 14.798 21.155 4.545 1.00 1.00 C
ATOM 8 O4' A B 14 14.045 20.149 3.902 1.00 1.00 O
ATOM 9 C3' A B 14 14.672 20.795 6.025 1.00 1.00 C
ATOM 10 O3' A B 14 14.949 21.876 6.892 1.00 1.00 O
ATOM 11 C2' A B 14 13.194 20.373 6.115 1.00 1.00 C
ATOM 12 O2' A B 14 12.441 21.577 6.174 1.00 1.00 O
ATOM 13 C1' A B 14 13.031 19.632 4.814 1.00 1.00 C
ATOM 14 N9 A B 14 13.182 18.170 4.859 1.00 1.00 N
ATOM 15 C8 A B 14 14.298 17.435 4.530 1.00 1.00 C
ATOM 16 N7 A B 14 14.129 16.137 4.649 1.00 1.00 N
ATOM 17 C5 A B 14 12.808 16.021 5.083 1.00 1.00 C
ATOM 18 C6 A B 14 12.024 14.892 5.382 1.00 1.00 C
ATOM 19 N6 A B 14 12.477 13.648 5.307 1.00 1.00 N
ATOM 20 N1 A B 14 10.746 15.144 5.786 1.00 1.00 N
ATOM 21 C2 A B 14 10.270 16.415 5.875 1.00 1.00 C
ATOM 22 N3 A B 14 10.951 17.531 5.591 1.00 1.00 N
ATOM 23 C4 A B 14 12.211 17.259 5.203 1.00 1.00 C
TER

Atoms:
C4: (8.020,13.403,7.430)
N3: (9.275,13.124,6.982)
OP1: (5.120,4.855,6.922)
OP2: (3.944,6.603,5.756)
C2: (9.751,11.846,6.937)
C1': (9.480,9.479,7.296)
C3': (9.805,7.365,8.148)
O5': (6.229,7.201,6.892)
O4': (8.442,8.623,6.728)
C5': (7.279,6.875,7.834)
P: (5.295,6.141,6.174)
C4': (8.593,7.310,7.206)
C2': (9.829,8.833,8.581)
O2': (11.102,9.167,9.030)
N1: (8.919,10.833,7.385)
O4: (7.671,14.620,7.430)
O2: (10.873,11.587,6.533)
C6: (7.665,11.091,7.834)
C5: (7.182,12.342,7.879)
O3': (11.053,7.079,7.475)
OP1: (18.609,20.189,2.272)
OP2: (17.711,17.898,2.407)
C3': (14.672,20.795,6.025)
C1': (13.031,19.632,4.814)
C5': (16.209,21.155,4.007)
O4': (14.045,20.149,3.902)
C8: (14.298,17.435,4.530)
O2': (12.441,21.577,6.174)
C6: (12.024,14.892,5.382)
C5: (12.808,16.021,5.083)
C4: (12.211,17.259,5.203)
P: (17.391,19.353,2.497)
C4': (14.798,21.155,4.545)
C2': (13.194,20.373,6.115)
C2: (10.270,16.415,5.875)
N1: (10.746,15.144,5.786)
N3: (10.951,17.531,5.591)
N6: (12.477,13.648,5.307)
N7: (14.129,16.137,4.649)
N9: (13.182,18.170,4.859)
O5': (16.571,19.761,3.812)
O3': (14.949,21.876,6.892)
Image (generated by PyMOL):
PyMOL image
show in jmol