ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G9C:S50:S45

Extra

PDB:
ATOM 1 O3' U A 49 -9.076 -39.074 94.588 1.00 69.95 O
ATOM 2 P U A 50 -10.307 -38.426 93.796 1.00 69.10 P
ATOM 3 OP1 U A 50 -11.569 -38.937 94.377 1.00 69.38 O
ATOM 4 OP2 U A 50 -10.063 -38.609 92.351 1.00 69.26 O
ATOM 5 O5' U A 50 -10.176 -36.870 94.138 1.00 68.24 O
ATOM 6 C5' U A 50 -9.047 -36.083 93.751 1.00 67.19 C
ATOM 7 C4' U A 50 -9.257 -34.609 94.091 1.00 66.45 C
ATOM 8 O4' U A 50 -10.436 -34.095 93.415 1.00 66.25 O
ATOM 9 C3' U A 50 -9.464 -34.260 95.564 1.00 65.77 C
ATOM 10 O3' U A 50 -8.984 -32.940 95.852 1.00 65.02 O
ATOM 11 C2' U A 50 -10.985 -34.328 95.694 1.00 65.80 C
ATOM 12 O2' U A 50 -11.484 -33.565 96.773 1.00 66.07 O
ATOM 13 C1' U A 50 -11.438 -33.749 94.354 1.00 66.01 C
ATOM 14 N1 U A 50 -12.763 -34.262 93.858 1.00 66.36 N
ATOM 15 C2 U A 50 -13.931 -33.567 94.140 1.00 66.48 C
ATOM 16 O2 U A 50 -13.974 -32.534 94.786 1.00 66.52 O
ATOM 17 N3 U A 50 -15.075 -34.138 93.632 1.00 66.54 N
ATOM 18 C4 U A 50 -15.172 -35.300 92.884 1.00 66.62 C
ATOM 19 O4 U A 50 -16.268 -35.688 92.495 1.00 67.08 O
ATOM 20 C5 U A 50 -13.922 -35.965 92.627 1.00 66.52 C
ATOM 21 C6 U A 50 -12.795 -35.430 93.113 1.00 66.46 C
ATOM 22 P C A 51 -7.441 -32.578 96.107 1.00 64.53 P
ATOM 23 OP1 C A 51 -7.433 -31.398 97.001 1.00 64.78 O
ATOM 24 OP2 C A 51 -6.759 -32.484 94.795 1.00 64.41 O
ATOM 25 O5' C A 51 -6.856 -33.837 96.910 1.00 63.93 O
TER

ATOM 1 O3' G B 44 -23.334 -27.319 98.768 1.00 60.01 O
ATOM 2 P A B 45 -23.098 -28.625 99.654 1.00 60.62 P
ATOM 3 OP1 A B 45 -24.288 -28.831 100.513 1.00 60.47 O
ATOM 4 OP2 A B 45 -21.760 -28.521 100.288 1.00 60.80 O
ATOM 5 O5' A B 45 -23.068 -29.775 98.537 1.00 60.73 O
ATOM 6 C5' A B 45 -24.271 -30.213 97.904 1.00 60.61 C
ATOM 7 C4' A B 45 -23.991 -31.164 96.753 1.00 60.86 C
ATOM 8 O4' A B 45 -23.157 -30.524 95.751 1.00 60.66 O
ATOM 9 C3' A B 45 -23.213 -32.427 97.101 1.00 61.11 C
ATOM 10 O3' A B 45 -24.044 -33.407 97.703 1.00 61.79 O
ATOM 11 C2' A B 45 -22.706 -32.847 95.725 1.00 60.90 C
ATOM 12 O2' A B 45 -23.689 -33.460 94.912 1.00 60.87 O
ATOM 13 C1' A B 45 -22.300 -31.488 95.157 1.00 60.67 C
ATOM 14 N9 A B 45 -20.904 -31.162 95.451 1.00 60.38 N
ATOM 15 C8 A B 45 -20.435 -30.217 96.320 1.00 60.42 C
ATOM 16 N7 A B 45 -19.127 -30.151 96.386 1.00 60.31 N
ATOM 17 C5 A B 45 -18.704 -31.124 95.501 1.00 60.23 C
ATOM 18 C6 A B 45 -17.421 -31.562 95.108 1.00 60.35 C
ATOM 19 N6 A B 45 -16.288 -31.042 95.588 1.00 60.29 N
ATOM 20 N1 A B 45 -17.343 -32.562 94.199 1.00 60.43 N
ATOM 21 C2 A B 45 -18.480 -33.089 93.721 1.00 60.40 C
ATOM 22 N3 A B 45 -19.739 -32.756 94.011 1.00 60.38 N
ATOM 23 C4 A B 45 -19.785 -31.760 94.916 1.00 60.32 C
ATOM 24 P G B 46 -23.605 -34.057 99.099 1.00 62.71 P
ATOM 25 OP1 G B 46 -24.756 -34.821 99.628 1.00 62.50 O
ATOM 26 OP2 G B 46 -22.986 -33.006 99.939 1.00 62.72 O
ATOM 27 O5' G B 46 -22.462 -35.085 98.663 1.00 63.92 O
TER

Atoms:
C4: (-15.172,-35.300,92.884)
N3: (-15.075,-34.138,93.632)
OP1: (-11.569,-38.937,94.377)
OP2: (-10.063,-38.609,92.351)
C2: (-13.931,-33.567,94.140)
C1': (-11.438,-33.749,94.354)
C3': (-9.464,-34.260,95.564)
O5': (-10.176,-36.870,94.138)
O4': (-10.436,-34.095,93.415)
C5': (-9.047,-36.083,93.751)
P: (-10.307,-38.426,93.796)
C4': (-9.257,-34.609,94.091)
C2': (-10.985,-34.328,95.694)
O2': (-11.484,-33.565,96.773)
N1: (-12.763,-34.262,93.858)
O4: (-16.268,-35.688,92.495)
O2: (-13.974,-32.534,94.786)
C6: (-12.795,-35.430,93.113)
C5: (-13.922,-35.965,92.627)
O3': (-8.984,-32.940,95.852)
OP1: (-24.288,-28.831,100.513)
OP2: (-21.760,-28.521,100.288)
C3': (-23.213,-32.427,97.101)
C1': (-22.300,-31.488,95.157)
C5': (-24.271,-30.213,97.904)
O4': (-23.157,-30.524,95.751)
C8: (-20.435,-30.217,96.320)
O2': (-23.689,-33.460,94.912)
C6: (-17.421,-31.562,95.108)
C5: (-18.704,-31.124,95.501)
C4: (-19.785,-31.760,94.916)
P: (-23.098,-28.625,99.654)
C4': (-23.991,-31.164,96.753)
C2': (-22.706,-32.847,95.725)
C2: (-18.480,-33.089,93.721)
N1: (-17.343,-32.562,94.199)
N3: (-19.739,-32.756,94.011)
N6: (-16.288,-31.042,95.588)
N7: (-19.127,-30.151,96.386)
N9: (-20.904,-31.162,95.451)
O5': (-23.068,-29.775,98.537)
O3': (-24.044,-33.407,97.703)
Image (generated by PyMOL):
PyMOL image
show in jmol