Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A170:A196
Extra
PDB:
ATOM 1 O3' U A 169 81.486 49.185 -13.427 1.00 68.92 O
ATOM 2 P G A 170 81.807 50.107 -14.696 1.00 77.55 P
ATOM 3 OP1 G A 170 80.708 51.091 -14.836 1.00 62.96 O
ATOM 4 OP2 G A 170 82.160 49.232 -15.847 1.00 62.96 O
ATOM 5 O5' G A 170 83.130 50.866 -14.241 1.00 77.55 O
ATOM 6 C5' G A 170 83.129 51.737 -13.097 1.00 77.55 C
ATOM 7 C4' G A 170 84.132 52.841 -13.303 1.00 77.55 C
ATOM 8 O4' G A 170 85.485 52.331 -13.137 1.00 77.55 O
ATOM 9 C3' G A 170 84.085 53.450 -14.690 1.00 77.55 C
ATOM 10 O3' G A 170 83.237 54.571 -14.974 1.00 77.55 O
ATOM 11 C2' G A 170 85.343 52.983 -15.420 1.00 77.55 C
ATOM 12 O2' G A 170 85.896 53.960 -16.277 1.00 77.55 O
ATOM 13 C1' G A 170 86.289 52.695 -14.246 1.00 77.55 C
ATOM 14 N9 G A 170 87.255 51.616 -14.471 1.00 62.96 N
ATOM 15 C8 G A 170 87.060 50.472 -15.206 1.00 62.96 C
ATOM 16 N7 G A 170 88.113 49.699 -15.248 1.00 62.96 N
ATOM 17 C5 G A 170 89.063 50.365 -14.494 1.00 62.96 C
ATOM 18 C6 G A 170 90.402 50.014 -14.199 1.00 62.96 C
ATOM 19 O6 G A 170 91.028 49.012 -14.556 1.00 62.96 O
ATOM 20 N1 G A 170 91.018 50.968 -13.398 1.00 62.96 N
ATOM 21 C2 G A 170 90.420 52.109 -12.930 1.00 62.96 C
ATOM 22 N2 G A 170 91.179 52.884 -12.146 1.00 62.96 N
ATOM 23 N3 G A 170 89.169 52.457 -13.205 1.00 62.96 N
ATOM 24 C4 G A 170 88.553 51.545 -13.991 1.00 62.96 C
ATOM 25 P U A 171 83.835 56.058 -14.995 1.00 74.28 P
ATOM 26 OP1 U A 171 83.417 56.729 -16.255 1.00 79.66 O
ATOM 27 OP2 U A 171 85.271 55.970 -14.660 1.00 79.66 O
ATOM 28 O5' U A 171 83.089 56.793 -13.791 1.00 74.28 O
TER
ATOM 1 O3' C B 195 95.487 46.999 -14.728 1.00 50.55 O
ATOM 2 P A B 196 94.642 45.800 -14.079 1.00 54.50 P
ATOM 3 OP1 A B 196 95.577 44.657 -13.962 1.00 52.83 O
ATOM 4 OP2 A B 196 93.359 45.632 -14.812 1.00 52.83 O
ATOM 5 O5' A B 196 94.298 46.329 -12.617 1.00 54.50 O
ATOM 6 C5' A B 196 93.430 47.458 -12.434 1.00 54.50 C
ATOM 7 C4' A B 196 93.964 48.357 -11.347 1.00 54.50 C
ATOM 8 O4' A B 196 93.240 49.602 -11.372 1.00 54.50 O
ATOM 9 C3' A B 196 93.828 47.833 -9.932 1.00 54.50 C
ATOM 10 O3' A B 196 94.992 47.088 -9.610 1.00 54.50 O
ATOM 11 C2' A B 196 93.739 49.106 -9.094 1.00 54.50 C
ATOM 12 O2' A B 196 95.015 49.631 -8.760 1.00 54.50 O
ATOM 13 C1' A B 196 93.044 50.072 -10.057 1.00 54.50 C
ATOM 14 N9 A B 196 91.610 50.284 -9.892 1.00 52.83 N
ATOM 15 C8 A B 196 90.593 49.537 -10.430 1.00 52.83 C
ATOM 16 N7 A B 196 89.404 50.043 -10.229 1.00 52.83 N
ATOM 17 C5 A B 196 89.651 51.182 -9.483 1.00 52.83 C
ATOM 18 C6 A B 196 88.801 52.167 -8.968 1.00 52.83 C
ATOM 19 N6 A B 196 87.479 52.164 -9.150 1.00 52.83 N
ATOM 20 N1 A B 196 89.362 53.173 -8.255 1.00 52.83 N
ATOM 21 C2 A B 196 90.694 53.169 -8.086 1.00 52.83 C
ATOM 22 N3 A B 196 91.599 52.298 -8.533 1.00 52.83 N
ATOM 23 C4 A B 196 91.005 51.322 -9.235 1.00 52.83 C
ATOM 24 P A B 197 94.886 45.813 -8.644 1.00 57.68 P
ATOM 25 OP1 A B 197 96.201 45.116 -8.725 1.00 52.83 O
ATOM 26 OP2 A B 197 93.633 45.081 -8.991 1.00 52.83 O
ATOM 27 O5' A B 197 94.738 46.433 -7.184 1.00 57.68 O
TER
ATOM 2 P G A 170 81.807 50.107 -14.696 1.00 77.55 P
ATOM 3 OP1 G A 170 80.708 51.091 -14.836 1.00 62.96 O
ATOM 4 OP2 G A 170 82.160 49.232 -15.847 1.00 62.96 O
ATOM 5 O5' G A 170 83.130 50.866 -14.241 1.00 77.55 O
ATOM 6 C5' G A 170 83.129 51.737 -13.097 1.00 77.55 C
ATOM 7 C4' G A 170 84.132 52.841 -13.303 1.00 77.55 C
ATOM 8 O4' G A 170 85.485 52.331 -13.137 1.00 77.55 O
ATOM 9 C3' G A 170 84.085 53.450 -14.690 1.00 77.55 C
ATOM 10 O3' G A 170 83.237 54.571 -14.974 1.00 77.55 O
ATOM 11 C2' G A 170 85.343 52.983 -15.420 1.00 77.55 C
ATOM 12 O2' G A 170 85.896 53.960 -16.277 1.00 77.55 O
ATOM 13 C1' G A 170 86.289 52.695 -14.246 1.00 77.55 C
ATOM 14 N9 G A 170 87.255 51.616 -14.471 1.00 62.96 N
ATOM 15 C8 G A 170 87.060 50.472 -15.206 1.00 62.96 C
ATOM 16 N7 G A 170 88.113 49.699 -15.248 1.00 62.96 N
ATOM 17 C5 G A 170 89.063 50.365 -14.494 1.00 62.96 C
ATOM 18 C6 G A 170 90.402 50.014 -14.199 1.00 62.96 C
ATOM 19 O6 G A 170 91.028 49.012 -14.556 1.00 62.96 O
ATOM 20 N1 G A 170 91.018 50.968 -13.398 1.00 62.96 N
ATOM 21 C2 G A 170 90.420 52.109 -12.930 1.00 62.96 C
ATOM 22 N2 G A 170 91.179 52.884 -12.146 1.00 62.96 N
ATOM 23 N3 G A 170 89.169 52.457 -13.205 1.00 62.96 N
ATOM 24 C4 G A 170 88.553 51.545 -13.991 1.00 62.96 C
ATOM 25 P U A 171 83.835 56.058 -14.995 1.00 74.28 P
ATOM 26 OP1 U A 171 83.417 56.729 -16.255 1.00 79.66 O
ATOM 27 OP2 U A 171 85.271 55.970 -14.660 1.00 79.66 O
ATOM 28 O5' U A 171 83.089 56.793 -13.791 1.00 74.28 O
TER
ATOM 1 O3' C B 195 95.487 46.999 -14.728 1.00 50.55 O
ATOM 2 P A B 196 94.642 45.800 -14.079 1.00 54.50 P
ATOM 3 OP1 A B 196 95.577 44.657 -13.962 1.00 52.83 O
ATOM 4 OP2 A B 196 93.359 45.632 -14.812 1.00 52.83 O
ATOM 5 O5' A B 196 94.298 46.329 -12.617 1.00 54.50 O
ATOM 6 C5' A B 196 93.430 47.458 -12.434 1.00 54.50 C
ATOM 7 C4' A B 196 93.964 48.357 -11.347 1.00 54.50 C
ATOM 8 O4' A B 196 93.240 49.602 -11.372 1.00 54.50 O
ATOM 9 C3' A B 196 93.828 47.833 -9.932 1.00 54.50 C
ATOM 10 O3' A B 196 94.992 47.088 -9.610 1.00 54.50 O
ATOM 11 C2' A B 196 93.739 49.106 -9.094 1.00 54.50 C
ATOM 12 O2' A B 196 95.015 49.631 -8.760 1.00 54.50 O
ATOM 13 C1' A B 196 93.044 50.072 -10.057 1.00 54.50 C
ATOM 14 N9 A B 196 91.610 50.284 -9.892 1.00 52.83 N
ATOM 15 C8 A B 196 90.593 49.537 -10.430 1.00 52.83 C
ATOM 16 N7 A B 196 89.404 50.043 -10.229 1.00 52.83 N
ATOM 17 C5 A B 196 89.651 51.182 -9.483 1.00 52.83 C
ATOM 18 C6 A B 196 88.801 52.167 -8.968 1.00 52.83 C
ATOM 19 N6 A B 196 87.479 52.164 -9.150 1.00 52.83 N
ATOM 20 N1 A B 196 89.362 53.173 -8.255 1.00 52.83 N
ATOM 21 C2 A B 196 90.694 53.169 -8.086 1.00 52.83 C
ATOM 22 N3 A B 196 91.599 52.298 -8.533 1.00 52.83 N
ATOM 23 C4 A B 196 91.005 51.322 -9.235 1.00 52.83 C
ATOM 24 P A B 197 94.886 45.813 -8.644 1.00 57.68 P
ATOM 25 OP1 A B 197 96.201 45.116 -8.725 1.00 52.83 O
ATOM 26 OP2 A B 197 93.633 45.081 -8.991 1.00 52.83 O
ATOM 27 O5' A B 197 94.738 46.433 -7.184 1.00 57.68 O
TER
Atoms:
OP1: (80.708,51.091,-14.836)
OP2: (82.160,49.232,-15.847)
C3': (84.085,53.450,-14.690)
C1': (86.289,52.695,-14.246)
C5': (83.129,51.737,-13.097)
O6: (91.028,49.012,-14.556)
O4': (85.485,52.331,-13.137)
C8: (87.060,50.472,-15.206)
C2: (90.420,52.109,-12.930)
C6: (90.402,50.014,-14.199)
C5: (89.063,50.365,-14.494)
C4: (88.553,51.545,-13.991)
P: (81.807,50.107,-14.696)
C4': (84.132,52.841,-13.303)
C2': (85.343,52.983,-15.420)
O2': (85.896,53.960,-16.277)
N1: (91.018,50.968,-13.398)
N2: (91.179,52.884,-12.146)
N3: (89.169,52.457,-13.205)
N7: (88.113,49.699,-15.248)
N9: (87.255,51.616,-14.471)
O5': (83.130,50.866,-14.241)
O3': (83.237,54.571,-14.974)
OP2: (82.160,49.232,-15.847)
C3': (84.085,53.450,-14.690)
C1': (86.289,52.695,-14.246)
C5': (83.129,51.737,-13.097)
O6: (91.028,49.012,-14.556)
O4': (85.485,52.331,-13.137)
C8: (87.060,50.472,-15.206)
C2: (90.420,52.109,-12.930)
C6: (90.402,50.014,-14.199)
C5: (89.063,50.365,-14.494)
C4: (88.553,51.545,-13.991)
P: (81.807,50.107,-14.696)
C4': (84.132,52.841,-13.303)
C2': (85.343,52.983,-15.420)
O2': (85.896,53.960,-16.277)
N1: (91.018,50.968,-13.398)
N2: (91.179,52.884,-12.146)
N3: (89.169,52.457,-13.205)
N7: (88.113,49.699,-15.248)
N9: (87.255,51.616,-14.471)
O5': (83.130,50.866,-14.241)
O3': (83.237,54.571,-14.974)
OP1: (95.577,44.657,-13.962)
OP2: (93.359,45.632,-14.812)
C3': (93.828,47.833,-9.932)
C1': (93.044,50.072,-10.057)
C5': (93.430,47.458,-12.434)
O4': (93.240,49.602,-11.372)
C8: (90.593,49.537,-10.430)
O2': (95.015,49.631,-8.760)
C6: (88.801,52.167,-8.968)
C5: (89.651,51.182,-9.483)
C4: (91.005,51.322,-9.235)
P: (94.642,45.800,-14.079)
C4': (93.964,48.357,-11.347)
C2': (93.739,49.106,-9.094)
C2: (90.694,53.169,-8.086)
N1: (89.362,53.173,-8.255)
N3: (91.599,52.298,-8.533)
N6: (87.479,52.164,-9.150)
N7: (89.404,50.043,-10.229)
N9: (91.610,50.284,-9.892)
O5': (94.298,46.329,-12.617)
O3': (94.992,47.088,-9.610)
OP2: (93.359,45.632,-14.812)
C3': (93.828,47.833,-9.932)
C1': (93.044,50.072,-10.057)
C5': (93.430,47.458,-12.434)
O4': (93.240,49.602,-11.372)
C8: (90.593,49.537,-10.430)
O2': (95.015,49.631,-8.760)
C6: (88.801,52.167,-8.968)
C5: (89.651,51.182,-9.483)
C4: (91.005,51.322,-9.235)
P: (94.642,45.800,-14.079)
C4': (93.964,48.357,-11.347)
C2': (93.739,49.106,-9.094)
C2: (90.694,53.169,-8.086)
N1: (89.362,53.173,-8.255)
N3: (91.599,52.298,-8.533)
N6: (87.479,52.164,-9.150)
N7: (89.404,50.043,-10.229)
N9: (91.610,50.284,-9.892)
O5': (94.298,46.329,-12.617)
O3': (94.992,47.088,-9.610)
Image (generated by PyMOL):