Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A461:A468
Extra
PDB:
ATOM 1 O3' G A 460 -60.315 -90.853 43.351 1.00 5.79 O
ATOM 2 P A A 461 -60.578 -90.960 41.778 1.00 26.26 P
ATOM 3 OP1 A A 461 -62.029 -90.707 41.550 1.00 16.52 O
ATOM 4 OP2 A A 461 -59.969 -92.203 41.268 1.00 16.51 O
ATOM 5 O5' A A 461 -59.743 -89.740 41.190 1.00 7.19 O
ATOM 6 C5' A A 461 -60.276 -88.409 41.223 1.00 7.19 C
ATOM 7 C4' A A 461 -59.257 -87.429 40.705 1.00 7.19 C
ATOM 8 O4' A A 461 -58.181 -87.298 41.669 1.00 7.19 O
ATOM 9 C3' A A 461 -58.610 -87.772 39.366 1.00 7.19 C
ATOM 10 O3' A A 461 -58.454 -86.592 38.587 1.00 7.19 O
ATOM 11 C2' A A 461 -57.233 -88.291 39.766 1.00 7.19 C
ATOM 12 O2' A A 461 -56.245 -88.012 38.796 1.00 7.19 O
ATOM 13 C1' A A 461 -56.946 -87.476 41.019 1.00 7.19 C
ATOM 14 N9 A A 461 -56.017 -88.110 41.950 1.00 9.08 N
ATOM 15 C8 A A 461 -56.238 -89.171 42.789 1.00 9.00 C
ATOM 16 N7 A A 461 -55.204 -89.473 43.536 1.00 8.83 N
ATOM 17 C5 A A 461 -54.240 -88.557 43.155 1.00 8.78 C
ATOM 18 C6 A A 461 -52.934 -88.356 43.570 1.00 8.80 C
ATOM 19 N6 A A 461 -52.348 -89.086 44.517 1.00 8.93 N
ATOM 20 N1 A A 461 -52.229 -87.367 42.981 1.00 8.93 N
ATOM 21 C2 A A 461 -52.819 -86.636 42.041 1.00 8.97 C
ATOM 22 N3 A A 461 -54.049 -86.725 41.568 1.00 8.89 N
ATOM 23 C4 A A 461 -54.718 -87.720 42.173 1.00 8.89 C
ATOM 24 P U A 462 -59.153 -86.491 37.144 1.00 6.78 P
ATOM 25 OP1 U A 462 -60.393 -87.310 37.134 1.00 47.38 O
ATOM 26 OP2 U A 462 -58.112 -86.696 36.088 1.00 47.30 O
ATOM 27 O5' U A 462 -59.614 -84.974 37.083 1.00 0.79 O
TER
ATOM 1 O3' C B 467 -51.939 -80.588 43.528 1.00 17.01 O
ATOM 2 P A B 468 -52.868 -81.859 43.861 1.00 11.90 P
ATOM 3 OP1 A B 468 -53.266 -82.478 42.560 1.00 11.90 O
ATOM 4 OP2 A B 468 -53.922 -81.479 44.845 1.00 11.90 O
ATOM 5 O5' A B 468 -51.836 -82.806 44.595 1.00 4.22 O
ATOM 6 C5' A B 468 -51.050 -82.307 45.672 1.00 4.22 C
ATOM 7 C4' A B 468 -50.445 -83.460 46.401 1.00 4.22 C
ATOM 8 O4' A B 468 -51.521 -84.309 46.894 1.00 4.22 O
ATOM 9 C3' A B 468 -49.599 -84.325 45.487 1.00 4.22 C
ATOM 10 O3' A B 468 -48.496 -84.827 46.241 1.00 4.22 O
ATOM 11 C2' A B 468 -50.576 -85.418 45.059 1.00 4.22 C
ATOM 12 O2' A B 468 -49.967 -86.627 44.682 1.00 4.22 O
ATOM 13 C1' A B 468 -51.430 -85.587 46.312 1.00 4.22 C
ATOM 14 N9 A B 468 -52.788 -86.045 46.058 1.00 0.79 N
ATOM 15 C8 A B 468 -53.686 -85.572 45.141 1.00 0.79 C
ATOM 16 N7 A B 468 -54.850 -86.176 45.184 1.00 0.79 N
ATOM 17 C5 A B 468 -54.701 -87.099 46.198 1.00 0.79 C
ATOM 18 C6 A B 468 -55.576 -88.012 46.749 1.00 0.79 C
ATOM 19 N6 A B 468 -56.839 -88.115 46.368 1.00 0.79 N
ATOM 20 N1 A B 468 -55.120 -88.812 47.732 1.00 0.79 N
ATOM 21 C2 A B 468 -53.868 -88.657 48.143 1.00 0.79 C
ATOM 22 N3 A B 468 -52.951 -87.802 47.723 1.00 0.79 N
ATOM 23 C4 A B 468 -53.435 -87.044 46.733 1.00 0.79 C
ATOM 24 P C B 469 -47.135 -83.974 46.317 1.00 65.10 P
ATOM 25 OP1 C B 469 -46.246 -84.655 47.278 1.00 37.20 O
ATOM 26 OP2 C B 469 -47.480 -82.553 46.526 1.00 37.20 O
ATOM 27 O5' C B 469 -46.511 -84.101 44.864 1.00 29.45 O
TER
ATOM 2 P A A 461 -60.578 -90.960 41.778 1.00 26.26 P
ATOM 3 OP1 A A 461 -62.029 -90.707 41.550 1.00 16.52 O
ATOM 4 OP2 A A 461 -59.969 -92.203 41.268 1.00 16.51 O
ATOM 5 O5' A A 461 -59.743 -89.740 41.190 1.00 7.19 O
ATOM 6 C5' A A 461 -60.276 -88.409 41.223 1.00 7.19 C
ATOM 7 C4' A A 461 -59.257 -87.429 40.705 1.00 7.19 C
ATOM 8 O4' A A 461 -58.181 -87.298 41.669 1.00 7.19 O
ATOM 9 C3' A A 461 -58.610 -87.772 39.366 1.00 7.19 C
ATOM 10 O3' A A 461 -58.454 -86.592 38.587 1.00 7.19 O
ATOM 11 C2' A A 461 -57.233 -88.291 39.766 1.00 7.19 C
ATOM 12 O2' A A 461 -56.245 -88.012 38.796 1.00 7.19 O
ATOM 13 C1' A A 461 -56.946 -87.476 41.019 1.00 7.19 C
ATOM 14 N9 A A 461 -56.017 -88.110 41.950 1.00 9.08 N
ATOM 15 C8 A A 461 -56.238 -89.171 42.789 1.00 9.00 C
ATOM 16 N7 A A 461 -55.204 -89.473 43.536 1.00 8.83 N
ATOM 17 C5 A A 461 -54.240 -88.557 43.155 1.00 8.78 C
ATOM 18 C6 A A 461 -52.934 -88.356 43.570 1.00 8.80 C
ATOM 19 N6 A A 461 -52.348 -89.086 44.517 1.00 8.93 N
ATOM 20 N1 A A 461 -52.229 -87.367 42.981 1.00 8.93 N
ATOM 21 C2 A A 461 -52.819 -86.636 42.041 1.00 8.97 C
ATOM 22 N3 A A 461 -54.049 -86.725 41.568 1.00 8.89 N
ATOM 23 C4 A A 461 -54.718 -87.720 42.173 1.00 8.89 C
ATOM 24 P U A 462 -59.153 -86.491 37.144 1.00 6.78 P
ATOM 25 OP1 U A 462 -60.393 -87.310 37.134 1.00 47.38 O
ATOM 26 OP2 U A 462 -58.112 -86.696 36.088 1.00 47.30 O
ATOM 27 O5' U A 462 -59.614 -84.974 37.083 1.00 0.79 O
TER
ATOM 1 O3' C B 467 -51.939 -80.588 43.528 1.00 17.01 O
ATOM 2 P A B 468 -52.868 -81.859 43.861 1.00 11.90 P
ATOM 3 OP1 A B 468 -53.266 -82.478 42.560 1.00 11.90 O
ATOM 4 OP2 A B 468 -53.922 -81.479 44.845 1.00 11.90 O
ATOM 5 O5' A B 468 -51.836 -82.806 44.595 1.00 4.22 O
ATOM 6 C5' A B 468 -51.050 -82.307 45.672 1.00 4.22 C
ATOM 7 C4' A B 468 -50.445 -83.460 46.401 1.00 4.22 C
ATOM 8 O4' A B 468 -51.521 -84.309 46.894 1.00 4.22 O
ATOM 9 C3' A B 468 -49.599 -84.325 45.487 1.00 4.22 C
ATOM 10 O3' A B 468 -48.496 -84.827 46.241 1.00 4.22 O
ATOM 11 C2' A B 468 -50.576 -85.418 45.059 1.00 4.22 C
ATOM 12 O2' A B 468 -49.967 -86.627 44.682 1.00 4.22 O
ATOM 13 C1' A B 468 -51.430 -85.587 46.312 1.00 4.22 C
ATOM 14 N9 A B 468 -52.788 -86.045 46.058 1.00 0.79 N
ATOM 15 C8 A B 468 -53.686 -85.572 45.141 1.00 0.79 C
ATOM 16 N7 A B 468 -54.850 -86.176 45.184 1.00 0.79 N
ATOM 17 C5 A B 468 -54.701 -87.099 46.198 1.00 0.79 C
ATOM 18 C6 A B 468 -55.576 -88.012 46.749 1.00 0.79 C
ATOM 19 N6 A B 468 -56.839 -88.115 46.368 1.00 0.79 N
ATOM 20 N1 A B 468 -55.120 -88.812 47.732 1.00 0.79 N
ATOM 21 C2 A B 468 -53.868 -88.657 48.143 1.00 0.79 C
ATOM 22 N3 A B 468 -52.951 -87.802 47.723 1.00 0.79 N
ATOM 23 C4 A B 468 -53.435 -87.044 46.733 1.00 0.79 C
ATOM 24 P C B 469 -47.135 -83.974 46.317 1.00 65.10 P
ATOM 25 OP1 C B 469 -46.246 -84.655 47.278 1.00 37.20 O
ATOM 26 OP2 C B 469 -47.480 -82.553 46.526 1.00 37.20 O
ATOM 27 O5' C B 469 -46.511 -84.101 44.864 1.00 29.45 O
TER
Atoms:
OP1: (-62.029,-90.707,41.550)
OP2: (-59.969,-92.203,41.268)
C3': (-58.610,-87.772,39.366)
C1': (-56.946,-87.476,41.019)
C5': (-60.276,-88.409,41.223)
O4': (-58.181,-87.298,41.669)
C8: (-56.238,-89.171,42.789)
O2': (-56.245,-88.012,38.796)
C6: (-52.934,-88.356,43.570)
C5: (-54.240,-88.557,43.155)
C4: (-54.718,-87.720,42.173)
P: (-60.578,-90.960,41.778)
C4': (-59.257,-87.429,40.705)
C2': (-57.233,-88.291,39.766)
C2: (-52.819,-86.636,42.041)
N1: (-52.229,-87.367,42.981)
N3: (-54.049,-86.725,41.568)
N6: (-52.348,-89.086,44.517)
N7: (-55.204,-89.473,43.536)
N9: (-56.017,-88.110,41.950)
O5': (-59.743,-89.740,41.190)
O3': (-58.454,-86.592,38.587)
OP2: (-59.969,-92.203,41.268)
C3': (-58.610,-87.772,39.366)
C1': (-56.946,-87.476,41.019)
C5': (-60.276,-88.409,41.223)
O4': (-58.181,-87.298,41.669)
C8: (-56.238,-89.171,42.789)
O2': (-56.245,-88.012,38.796)
C6: (-52.934,-88.356,43.570)
C5: (-54.240,-88.557,43.155)
C4: (-54.718,-87.720,42.173)
P: (-60.578,-90.960,41.778)
C4': (-59.257,-87.429,40.705)
C2': (-57.233,-88.291,39.766)
C2: (-52.819,-86.636,42.041)
N1: (-52.229,-87.367,42.981)
N3: (-54.049,-86.725,41.568)
N6: (-52.348,-89.086,44.517)
N7: (-55.204,-89.473,43.536)
N9: (-56.017,-88.110,41.950)
O5': (-59.743,-89.740,41.190)
O3': (-58.454,-86.592,38.587)
OP1: (-53.266,-82.478,42.560)
OP2: (-53.922,-81.479,44.845)
C3': (-49.599,-84.325,45.487)
C1': (-51.430,-85.587,46.312)
C5': (-51.050,-82.307,45.672)
O4': (-51.521,-84.309,46.894)
C8: (-53.686,-85.572,45.141)
O2': (-49.967,-86.627,44.682)
C6: (-55.576,-88.012,46.749)
C5: (-54.701,-87.099,46.198)
C4: (-53.435,-87.044,46.733)
P: (-52.868,-81.859,43.861)
C4': (-50.445,-83.460,46.401)
C2': (-50.576,-85.418,45.059)
C2: (-53.868,-88.657,48.143)
N1: (-55.120,-88.812,47.732)
N3: (-52.951,-87.802,47.723)
N6: (-56.839,-88.115,46.368)
N7: (-54.850,-86.176,45.184)
N9: (-52.788,-86.045,46.058)
O5': (-51.836,-82.806,44.595)
O3': (-48.496,-84.827,46.241)
OP2: (-53.922,-81.479,44.845)
C3': (-49.599,-84.325,45.487)
C1': (-51.430,-85.587,46.312)
C5': (-51.050,-82.307,45.672)
O4': (-51.521,-84.309,46.894)
C8: (-53.686,-85.572,45.141)
O2': (-49.967,-86.627,44.682)
C6: (-55.576,-88.012,46.749)
C5: (-54.701,-87.099,46.198)
C4: (-53.435,-87.044,46.733)
P: (-52.868,-81.859,43.861)
C4': (-50.445,-83.460,46.401)
C2': (-50.576,-85.418,45.059)
C2: (-53.868,-88.657,48.143)
N1: (-55.120,-88.812,47.732)
N3: (-52.951,-87.802,47.723)
N6: (-56.839,-88.115,46.368)
N7: (-54.850,-86.176,45.184)
N9: (-52.788,-86.045,46.058)
O5': (-51.836,-82.806,44.595)
O3': (-48.496,-84.827,46.241)
Image (generated by PyMOL):