Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5F:A6:A28
Extra
PDB:
ATOM 1 O3' C A 5 17.905 -5.204 -34.549 1.00 43.38 O
ATOM 2 P G A 6 16.873 -4.187 -33.855 1.00 43.80 P
ATOM 3 OP1 G A 6 15.711 -4.002 -34.762 1.00 40.16 O
ATOM 4 OP2 G A 6 17.636 -3.004 -33.386 1.00 37.60 O
ATOM 5 O5' G A 6 16.417 -4.949 -32.535 1.00 43.35 O
ATOM 6 C5' G A 6 15.491 -6.031 -32.559 1.00 40.08 C
ATOM 7 C4' G A 6 15.297 -6.542 -31.153 1.00 39.77 C
ATOM 8 O4' G A 6 16.615 -6.839 -30.608 1.00 40.18 O
ATOM 9 C3' G A 6 14.744 -5.504 -30.184 1.00 40.71 C
ATOM 10 O3' G A 6 13.328 -5.500 -30.197 1.00 44.29 O
ATOM 11 C2' G A 6 15.265 -5.999 -28.846 1.00 38.07 C
ATOM 12 O2' G A 6 14.528 -7.087 -28.342 1.00 34.72 O
ATOM 13 C1' G A 6 16.664 -6.466 -29.235 1.00 37.31 C
ATOM 14 N9 G A 6 17.651 -5.407 -29.063 1.00 29.69 N
ATOM 15 C8 G A 6 18.207 -4.609 -30.033 1.00 28.85 C
ATOM 16 N7 G A 6 19.093 -3.770 -29.558 1.00 27.76 N
ATOM 17 C5 G A 6 19.111 -4.024 -28.196 1.00 27.56 C
ATOM 18 C6 G A 6 19.876 -3.432 -27.171 1.00 29.25 C
ATOM 19 O6 G A 6 20.736 -2.546 -27.265 1.00 33.39 O
ATOM 20 N1 G A 6 19.574 -3.977 -25.924 1.00 27.52 N
ATOM 21 C2 G A 6 18.659 -4.975 -25.701 1.00 28.21 C
ATOM 22 N2 G A 6 18.509 -5.358 -24.432 1.00 23.79 N
ATOM 23 N3 G A 6 17.943 -5.551 -26.659 1.00 27.97 N
ATOM 24 C4 G A 6 18.220 -5.026 -27.873 1.00 28.47 C
ATOM 25 P A A 7 12.540 -4.162 -30.590 1.00 39.60 P
ATOM 26 OP1 A A 7 13.052 -3.682 -31.895 1.00 37.11 O
ATOM 27 OP2 A A 7 12.512 -3.250 -29.417 1.00 40.11 O
ATOM 28 O5' A A 7 11.095 -4.728 -30.887 1.00 41.69 O
TER
ATOM 1 O3' G B 27 19.875 2.770 -27.190 1.00 75.08 O
ATOM 2 P A B 28 21.388 2.743 -26.631 1.00 68.75 P
ATOM 3 OP1 A B 28 21.902 4.093 -26.316 1.00 65.75 O
ATOM 4 OP2 A B 28 22.120 1.893 -27.606 1.00 67.47 O
ATOM 5 O5' A B 28 21.295 1.904 -25.276 1.00 65.56 O
ATOM 6 C5' A B 28 20.740 2.435 -24.058 1.00 61.57 C
ATOM 7 C4' A B 28 20.158 1.293 -23.252 1.00 59.95 C
ATOM 8 O4' A B 28 18.955 0.821 -23.870 1.00 58.03 O
ATOM 9 C3' A B 28 21.124 0.120 -23.130 1.00 59.12 C
ATOM 10 O3' A B 28 21.077 -0.242 -21.747 1.00 62.84 O
ATOM 11 C2' A B 28 20.493 -1.007 -23.950 1.00 56.11 C
ATOM 12 O2' A B 28 20.616 -2.312 -23.440 1.00 54.80 O
ATOM 13 C1' A B 28 19.032 -0.563 -24.059 1.00 52.82 C
ATOM 14 N9 A B 28 18.346 -0.869 -25.299 1.00 44.55 N
ATOM 15 C8 A B 28 18.600 -0.363 -26.545 1.00 43.18 C
ATOM 16 N7 A B 28 17.774 -0.798 -27.463 1.00 41.50 N
ATOM 17 C5 A B 28 16.933 -1.657 -26.771 1.00 38.22 C
ATOM 18 C6 A B 28 15.842 -2.423 -27.179 1.00 38.19 C
ATOM 19 N6 A B 28 15.395 -2.457 -28.439 1.00 39.50 N
ATOM 20 N1 A B 28 15.208 -3.165 -26.242 1.00 36.86 N
ATOM 21 C2 A B 28 15.657 -3.117 -24.980 1.00 38.19 C
ATOM 22 N3 A B 28 16.676 -2.426 -24.478 1.00 39.70 N
ATOM 23 C4 A B 28 17.278 -1.713 -25.440 1.00 39.87 C
ATOM 24 P U B 29 22.393 -0.687 -20.949 1.00 68.76 P
ATOM 25 OP1 U B 29 22.433 0.224 -19.772 1.00 69.11 O
ATOM 26 OP2 U B 29 23.536 -0.746 -21.893 1.00 70.19 O
ATOM 27 O5' U B 29 22.026 -2.136 -20.406 1.00 69.92 O
TER
ATOM 2 P G A 6 16.873 -4.187 -33.855 1.00 43.80 P
ATOM 3 OP1 G A 6 15.711 -4.002 -34.762 1.00 40.16 O
ATOM 4 OP2 G A 6 17.636 -3.004 -33.386 1.00 37.60 O
ATOM 5 O5' G A 6 16.417 -4.949 -32.535 1.00 43.35 O
ATOM 6 C5' G A 6 15.491 -6.031 -32.559 1.00 40.08 C
ATOM 7 C4' G A 6 15.297 -6.542 -31.153 1.00 39.77 C
ATOM 8 O4' G A 6 16.615 -6.839 -30.608 1.00 40.18 O
ATOM 9 C3' G A 6 14.744 -5.504 -30.184 1.00 40.71 C
ATOM 10 O3' G A 6 13.328 -5.500 -30.197 1.00 44.29 O
ATOM 11 C2' G A 6 15.265 -5.999 -28.846 1.00 38.07 C
ATOM 12 O2' G A 6 14.528 -7.087 -28.342 1.00 34.72 O
ATOM 13 C1' G A 6 16.664 -6.466 -29.235 1.00 37.31 C
ATOM 14 N9 G A 6 17.651 -5.407 -29.063 1.00 29.69 N
ATOM 15 C8 G A 6 18.207 -4.609 -30.033 1.00 28.85 C
ATOM 16 N7 G A 6 19.093 -3.770 -29.558 1.00 27.76 N
ATOM 17 C5 G A 6 19.111 -4.024 -28.196 1.00 27.56 C
ATOM 18 C6 G A 6 19.876 -3.432 -27.171 1.00 29.25 C
ATOM 19 O6 G A 6 20.736 -2.546 -27.265 1.00 33.39 O
ATOM 20 N1 G A 6 19.574 -3.977 -25.924 1.00 27.52 N
ATOM 21 C2 G A 6 18.659 -4.975 -25.701 1.00 28.21 C
ATOM 22 N2 G A 6 18.509 -5.358 -24.432 1.00 23.79 N
ATOM 23 N3 G A 6 17.943 -5.551 -26.659 1.00 27.97 N
ATOM 24 C4 G A 6 18.220 -5.026 -27.873 1.00 28.47 C
ATOM 25 P A A 7 12.540 -4.162 -30.590 1.00 39.60 P
ATOM 26 OP1 A A 7 13.052 -3.682 -31.895 1.00 37.11 O
ATOM 27 OP2 A A 7 12.512 -3.250 -29.417 1.00 40.11 O
ATOM 28 O5' A A 7 11.095 -4.728 -30.887 1.00 41.69 O
TER
ATOM 1 O3' G B 27 19.875 2.770 -27.190 1.00 75.08 O
ATOM 2 P A B 28 21.388 2.743 -26.631 1.00 68.75 P
ATOM 3 OP1 A B 28 21.902 4.093 -26.316 1.00 65.75 O
ATOM 4 OP2 A B 28 22.120 1.893 -27.606 1.00 67.47 O
ATOM 5 O5' A B 28 21.295 1.904 -25.276 1.00 65.56 O
ATOM 6 C5' A B 28 20.740 2.435 -24.058 1.00 61.57 C
ATOM 7 C4' A B 28 20.158 1.293 -23.252 1.00 59.95 C
ATOM 8 O4' A B 28 18.955 0.821 -23.870 1.00 58.03 O
ATOM 9 C3' A B 28 21.124 0.120 -23.130 1.00 59.12 C
ATOM 10 O3' A B 28 21.077 -0.242 -21.747 1.00 62.84 O
ATOM 11 C2' A B 28 20.493 -1.007 -23.950 1.00 56.11 C
ATOM 12 O2' A B 28 20.616 -2.312 -23.440 1.00 54.80 O
ATOM 13 C1' A B 28 19.032 -0.563 -24.059 1.00 52.82 C
ATOM 14 N9 A B 28 18.346 -0.869 -25.299 1.00 44.55 N
ATOM 15 C8 A B 28 18.600 -0.363 -26.545 1.00 43.18 C
ATOM 16 N7 A B 28 17.774 -0.798 -27.463 1.00 41.50 N
ATOM 17 C5 A B 28 16.933 -1.657 -26.771 1.00 38.22 C
ATOM 18 C6 A B 28 15.842 -2.423 -27.179 1.00 38.19 C
ATOM 19 N6 A B 28 15.395 -2.457 -28.439 1.00 39.50 N
ATOM 20 N1 A B 28 15.208 -3.165 -26.242 1.00 36.86 N
ATOM 21 C2 A B 28 15.657 -3.117 -24.980 1.00 38.19 C
ATOM 22 N3 A B 28 16.676 -2.426 -24.478 1.00 39.70 N
ATOM 23 C4 A B 28 17.278 -1.713 -25.440 1.00 39.87 C
ATOM 24 P U B 29 22.393 -0.687 -20.949 1.00 68.76 P
ATOM 25 OP1 U B 29 22.433 0.224 -19.772 1.00 69.11 O
ATOM 26 OP2 U B 29 23.536 -0.746 -21.893 1.00 70.19 O
ATOM 27 O5' U B 29 22.026 -2.136 -20.406 1.00 69.92 O
TER
Atoms:
OP1: (15.711,-4.002,-34.762)
OP2: (17.636,-3.004,-33.386)
C3': (14.744,-5.504,-30.184)
C1': (16.664,-6.466,-29.235)
C5': (15.491,-6.031,-32.559)
O6: (20.736,-2.546,-27.265)
O4': (16.615,-6.839,-30.608)
C8: (18.207,-4.609,-30.033)
C2: (18.659,-4.975,-25.701)
C6: (19.876,-3.432,-27.171)
C5: (19.111,-4.024,-28.196)
C4: (18.220,-5.026,-27.873)
P: (16.873,-4.187,-33.855)
C4': (15.297,-6.542,-31.153)
C2': (15.265,-5.999,-28.846)
O2': (14.528,-7.087,-28.342)
N1: (19.574,-3.977,-25.924)
N2: (18.509,-5.358,-24.432)
N3: (17.943,-5.551,-26.659)
N7: (19.093,-3.770,-29.558)
N9: (17.651,-5.407,-29.063)
O5': (16.417,-4.949,-32.535)
O3': (13.328,-5.500,-30.197)
OP2: (17.636,-3.004,-33.386)
C3': (14.744,-5.504,-30.184)
C1': (16.664,-6.466,-29.235)
C5': (15.491,-6.031,-32.559)
O6: (20.736,-2.546,-27.265)
O4': (16.615,-6.839,-30.608)
C8: (18.207,-4.609,-30.033)
C2: (18.659,-4.975,-25.701)
C6: (19.876,-3.432,-27.171)
C5: (19.111,-4.024,-28.196)
C4: (18.220,-5.026,-27.873)
P: (16.873,-4.187,-33.855)
C4': (15.297,-6.542,-31.153)
C2': (15.265,-5.999,-28.846)
O2': (14.528,-7.087,-28.342)
N1: (19.574,-3.977,-25.924)
N2: (18.509,-5.358,-24.432)
N3: (17.943,-5.551,-26.659)
N7: (19.093,-3.770,-29.558)
N9: (17.651,-5.407,-29.063)
O5': (16.417,-4.949,-32.535)
O3': (13.328,-5.500,-30.197)
OP1: (21.902,4.093,-26.316)
OP2: (22.120,1.893,-27.606)
C3': (21.124,0.120,-23.130)
C1': (19.032,-0.563,-24.059)
C5': (20.740,2.435,-24.058)
O4': (18.955,0.821,-23.870)
C8: (18.600,-0.363,-26.545)
O2': (20.616,-2.312,-23.440)
C6: (15.842,-2.423,-27.179)
C5: (16.933,-1.657,-26.771)
C4: (17.278,-1.713,-25.440)
P: (21.388,2.743,-26.631)
C4': (20.158,1.293,-23.252)
C2': (20.493,-1.007,-23.950)
C2: (15.657,-3.117,-24.980)
N1: (15.208,-3.165,-26.242)
N3: (16.676,-2.426,-24.478)
N6: (15.395,-2.457,-28.439)
N7: (17.774,-0.798,-27.463)
N9: (18.346,-0.869,-25.299)
O5': (21.295,1.904,-25.276)
O3': (21.077,-0.242,-21.747)
OP2: (22.120,1.893,-27.606)
C3': (21.124,0.120,-23.130)
C1': (19.032,-0.563,-24.059)
C5': (20.740,2.435,-24.058)
O4': (18.955,0.821,-23.870)
C8: (18.600,-0.363,-26.545)
O2': (20.616,-2.312,-23.440)
C6: (15.842,-2.423,-27.179)
C5: (16.933,-1.657,-26.771)
C4: (17.278,-1.713,-25.440)
P: (21.388,2.743,-26.631)
C4': (20.158,1.293,-23.252)
C2': (20.493,-1.007,-23.950)
C2: (15.657,-3.117,-24.980)
N1: (15.208,-3.165,-26.242)
N3: (16.676,-2.426,-24.478)
N6: (15.395,-2.457,-28.439)
N7: (17.774,-0.798,-27.463)
N9: (18.346,-0.869,-25.299)
O5': (21.295,1.904,-25.276)
O3': (21.077,-0.242,-21.747)
Image (generated by PyMOL):