ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A1227:A350

Extra

PDB:
ATOM 1 O3' C A1226 -13.699 165.746 226.525 1.00 73.83 O
ATOM 2 P G A1227 -12.314 165.708 227.322 1.00 93.41 P
ATOM 3 OP1 G A1227 -12.453 164.733 228.425 1.00 94.35 O
ATOM 4 OP2 G A1227 -11.924 167.106 227.594 1.00 84.40 O
ATOM 5 O5' G A1227 -11.278 165.110 226.273 1.00 82.76 O
ATOM 6 C5' G A1227 -11.503 163.813 225.763 1.00 88.12 C
ATOM 7 C4' G A1227 -10.462 163.507 224.714 1.00 83.14 C
ATOM 8 O4' G A1227 -10.689 164.326 223.547 1.00 81.80 O
ATOM 9 C3' G A1227 -9.051 163.865 225.133 1.00 80.48 C
ATOM 10 O3' G A1227 -8.571 162.830 225.971 1.00 88.10 O
ATOM 11 C2' G A1227 -8.371 163.886 223.771 1.00 85.29 C
ATOM 12 O2' G A1227 -8.153 162.579 223.277 1.00 83.19 O
ATOM 13 C1' G A1227 -9.443 164.550 222.910 1.00 81.71 C
ATOM 14 N9 G A1227 -9.288 165.985 222.669 1.00 81.55 N
ATOM 15 C8 G A1227 -10.138 167.001 223.047 1.00 84.63 C
ATOM 16 N7 G A1227 -9.737 168.183 222.671 1.00 76.91 N
ATOM 17 C5 G A1227 -8.548 167.938 221.997 1.00 75.36 C
ATOM 18 C6 G A1227 -7.655 168.833 221.363 1.00 82.27 C
ATOM 19 O6 G A1227 -7.734 170.065 221.267 1.00 95.94 O
ATOM 20 N1 G A1227 -6.573 168.165 220.799 1.00 79.53 N
ATOM 21 C2 G A1227 -6.382 166.802 220.846 1.00 89.24 C
ATOM 22 N2 G A1227 -5.279 166.336 220.249 1.00 85.63 N
ATOM 23 N3 G A1227 -7.209 165.950 221.436 1.00 85.16 N
ATOM 24 C4 G A1227 -8.264 166.590 221.986 1.00 78.45 C
ATOM 25 P A A1228 -7.545 163.163 227.151 1.00 89.82 P
ATOM 26 OP1 A A1228 -8.116 162.687 228.434 1.00 94.94 O
ATOM 27 OP2 A A1228 -7.129 164.578 227.005 1.00 79.72 O
ATOM 28 O5' A A1228 -6.315 162.211 226.767 1.00 90.04 O
TER

ATOM 1 O3' A B 349 -1.116 166.863 219.269 1.00 68.16 O
ATOM 2 P A B 350 -1.717 167.859 218.195 1.00 71.63 P
ATOM 3 OP1 A B 350 -3.142 167.487 218.035 1.00 78.10 O
ATOM 4 OP2 A B 350 -0.778 167.904 217.048 1.00 69.38 O
ATOM 5 O5' A B 350 -1.702 169.271 218.927 1.00 77.95 O
ATOM 6 C5' A B 350 -2.394 170.310 218.275 1.00 75.93 C
ATOM 7 C4' A B 350 -3.220 171.070 219.280 1.00 77.28 C
ATOM 8 O4' A B 350 -3.999 170.128 220.063 1.00 92.83 O
ATOM 9 C3' A B 350 -2.377 171.865 220.265 1.00 79.66 C
ATOM 10 O3' A B 350 -2.992 173.116 220.514 1.00 87.56 O
ATOM 11 C2' A B 350 -2.406 171.024 221.532 1.00 87.82 C
ATOM 12 O2' A B 350 -2.325 171.839 222.686 1.00 90.37 O
ATOM 13 C1' A B 350 -3.790 170.392 221.435 1.00 92.08 C
ATOM 14 N9 A B 350 -3.913 169.154 222.199 1.00 81.38 N
ATOM 15 C8 A B 350 -3.174 168.012 222.075 1.00 81.21 C
ATOM 16 N7 A B 350 -3.515 167.062 222.913 1.00 88.60 N
ATOM 17 C5 A B 350 -4.552 167.621 223.640 1.00 91.01 C
ATOM 18 C6 A B 350 -5.357 167.128 224.690 1.00 94.79 C
ATOM 19 N6 A B 350 -5.237 165.904 225.217 1.00 91.02 N
ATOM 20 N1 A B 350 -6.304 167.952 225.184 1.00 98.51 N
ATOM 21 C2 A B 350 -6.432 169.181 224.660 1.00100.63 C
ATOM 22 N3 A B 350 -5.738 169.756 223.676 1.00 92.53 N
ATOM 23 C4 A B 350 -4.807 168.911 223.210 1.00 85.86 C
ATOM 24 P A B 351 -2.760 174.360 219.532 1.00 85.99 P
ATOM 25 OP1 A B 351 -4.017 175.149 219.554 1.00 88.66 O
ATOM 26 OP2 A B 351 -2.211 173.878 218.241 1.00 72.12 O
ATOM 27 O5' A B 351 -1.594 175.152 220.294 1.00 87.32 O
TER

Atoms:
OP1: (-12.453,164.733,228.425)
OP2: (-11.924,167.106,227.594)
C3': (-9.051,163.865,225.133)
C1': (-9.443,164.550,222.910)
C5': (-11.503,163.813,225.763)
O6: (-7.734,170.065,221.267)
O4': (-10.689,164.326,223.547)
C8: (-10.138,167.001,223.047)
C2: (-6.382,166.802,220.846)
C6: (-7.655,168.833,221.363)
C5: (-8.548,167.938,221.997)
C4: (-8.264,166.590,221.986)
P: (-12.314,165.708,227.322)
C4': (-10.462,163.507,224.714)
C2': (-8.371,163.886,223.771)
O2': (-8.153,162.579,223.277)
N1: (-6.573,168.165,220.799)
N2: (-5.279,166.336,220.249)
N3: (-7.209,165.950,221.436)
N7: (-9.737,168.183,222.671)
N9: (-9.288,165.985,222.669)
O5': (-11.278,165.110,226.273)
O3': (-8.571,162.830,225.971)
OP1: (-3.142,167.487,218.035)
OP2: (-0.778,167.904,217.048)
C3': (-2.377,171.865,220.265)
C1': (-3.790,170.392,221.435)
C5': (-2.394,170.310,218.275)
O4': (-3.999,170.128,220.063)
C8: (-3.174,168.012,222.075)
O2': (-2.325,171.839,222.686)
C6: (-5.357,167.128,224.690)
C5: (-4.552,167.621,223.640)
C4: (-4.807,168.911,223.210)
P: (-1.717,167.859,218.195)
C4': (-3.220,171.070,219.280)
C2': (-2.406,171.024,221.532)
C2: (-6.432,169.181,224.660)
N1: (-6.304,167.952,225.184)
N3: (-5.738,169.756,223.676)
N6: (-5.237,165.904,225.217)
N7: (-3.515,167.062,222.913)
N9: (-3.913,169.154,222.199)
O5': (-1.702,169.271,218.927)
O3': (-2.992,173.116,220.514)
Image (generated by PyMOL):
PyMOL image
show in jmol