Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2026:A2556
Extra
PDB:
ATOM 1 O3' A A2025 -44.432 116.903 181.900 1.00 61.98 O
ATOM 2 P G A2026 -42.941 116.528 181.464 1.00 38.50 P
ATOM 3 OP1 G A2026 -42.413 117.716 180.736 1.00 42.81 O
ATOM 4 OP2 G A2026 -43.033 115.212 180.791 1.00 51.42 O
ATOM 5 O5' G A2026 -42.127 116.293 182.823 1.00 42.16 O
ATOM 6 C5' G A2026 -42.236 115.064 183.508 1.00 47.42 C
ATOM 7 C4' G A2026 -40.867 114.470 183.806 1.00 48.74 C
ATOM 8 O4' G A2026 -40.275 114.012 182.562 1.00 48.12 O
ATOM 9 C3' G A2026 -39.849 115.395 184.473 1.00 49.20 C
ATOM 10 O3' G A2026 -39.063 114.711 185.462 1.00 56.89 O
ATOM 11 C2' G A2026 -38.976 115.824 183.298 1.00 52.71 C
ATOM 12 O2' G A2026 -37.628 116.010 183.673 1.00 64.87 O
ATOM 13 C1' G A2026 -39.035 114.638 182.350 1.00 47.44 C
ATOM 14 N9 G A2026 -38.973 114.979 180.932 1.00 57.74 N
ATOM 15 C8 G A2026 -39.155 116.196 180.273 1.00 73.95 C
ATOM 16 N7 G A2026 -39.029 116.140 178.966 1.00 54.56 N
ATOM 17 C5 G A2026 -38.750 114.778 178.769 1.00 55.66 C
ATOM 18 C6 G A2026 -38.507 114.058 177.581 1.00 59.77 C
ATOM 19 O6 G A2026 -38.496 114.504 176.429 1.00 73.30 O
ATOM 20 N1 G A2026 -38.262 112.702 177.821 1.00 50.99 N
ATOM 21 C2 G A2026 -38.254 112.105 179.064 1.00 50.18 C
ATOM 22 N2 G A2026 -38.004 110.789 179.111 1.00 53.61 N
ATOM 23 N3 G A2026 -38.479 112.752 180.193 1.00 44.29 N
ATOM 24 C4 G A2026 -38.716 114.064 179.957 1.00 48.11 C
ATOM 25 P A A2027 -39.337 114.808 187.044 1.00 62.53 P
ATOM 26 OP1 A A2027 -40.486 113.941 187.416 1.00 59.35 O
ATOM 27 OP2 A A2027 -39.277 116.228 187.442 1.00 55.75 O
ATOM 28 O5' A A2027 -38.001 114.164 187.615 1.00 49.32 O
TER
ATOM 1 O3' C B2555 -37.256 106.470 177.607 1.00 43.69 O
ATOM 2 P A B2556 -36.005 107.361 177.204 1.00 46.22 P
ATOM 3 OP1 A B2556 -35.163 106.552 176.304 1.00 47.40 O
ATOM 4 OP2 A B2556 -35.426 107.913 178.453 1.00 58.64 O
ATOM 5 O5' A B2556 -36.654 108.563 176.398 1.00 42.21 O
ATOM 6 C5' A B2556 -37.502 108.270 175.323 1.00 53.26 C
ATOM 7 C4' A B2556 -37.567 109.476 174.401 1.00 50.97 C
ATOM 8 O4' A B2556 -37.365 110.667 175.200 1.00 49.38 O
ATOM 9 C3' A B2556 -36.529 109.538 173.284 1.00 52.49 C
ATOM 10 O3' A B2556 -37.170 109.948 172.088 1.00 48.04 O
ATOM 11 C2' A B2556 -35.532 110.584 173.776 1.00 53.36 C
ATOM 12 O2' A B2556 -34.934 111.328 172.732 1.00 67.12 O
ATOM 13 C1' A B2556 -36.430 111.502 174.572 1.00 48.11 C
ATOM 14 N9 A B2556 -35.732 112.129 175.667 1.00 56.40 N
ATOM 15 C8 A B2556 -35.250 111.500 176.770 1.00 58.46 C
ATOM 16 N7 A B2556 -34.659 112.308 177.619 1.00 59.36 N
ATOM 17 C5 A B2556 -34.775 113.552 177.029 1.00 52.08 C
ATOM 18 C6 A B2556 -34.357 114.833 177.434 1.00 54.43 C
ATOM 19 N6 A B2556 -33.706 115.065 178.576 1.00 67.29 N
ATOM 20 N1 A B2556 -34.632 115.867 176.614 1.00 49.59 N
ATOM 21 C2 A B2556 -35.281 115.614 175.467 1.00 54.42 C
ATOM 22 N3 A B2556 -35.723 114.454 174.974 1.00 51.53 N
ATOM 23 C4 A B2556 -35.437 113.456 175.820 1.00 54.67 C
ATOM 24 P C B2557 -36.569 109.587 170.651 1.00 61.86 P
ATOM 25 OP1 C B2557 -35.643 108.432 170.715 1.00 61.31 O
ATOM 26 OP2 C B2557 -36.093 110.841 170.033 1.00 80.13 O
ATOM 27 O5' C B2557 -37.928 109.185 169.928 1.00 73.19 O
TER
ATOM 2 P G A2026 -42.941 116.528 181.464 1.00 38.50 P
ATOM 3 OP1 G A2026 -42.413 117.716 180.736 1.00 42.81 O
ATOM 4 OP2 G A2026 -43.033 115.212 180.791 1.00 51.42 O
ATOM 5 O5' G A2026 -42.127 116.293 182.823 1.00 42.16 O
ATOM 6 C5' G A2026 -42.236 115.064 183.508 1.00 47.42 C
ATOM 7 C4' G A2026 -40.867 114.470 183.806 1.00 48.74 C
ATOM 8 O4' G A2026 -40.275 114.012 182.562 1.00 48.12 O
ATOM 9 C3' G A2026 -39.849 115.395 184.473 1.00 49.20 C
ATOM 10 O3' G A2026 -39.063 114.711 185.462 1.00 56.89 O
ATOM 11 C2' G A2026 -38.976 115.824 183.298 1.00 52.71 C
ATOM 12 O2' G A2026 -37.628 116.010 183.673 1.00 64.87 O
ATOM 13 C1' G A2026 -39.035 114.638 182.350 1.00 47.44 C
ATOM 14 N9 G A2026 -38.973 114.979 180.932 1.00 57.74 N
ATOM 15 C8 G A2026 -39.155 116.196 180.273 1.00 73.95 C
ATOM 16 N7 G A2026 -39.029 116.140 178.966 1.00 54.56 N
ATOM 17 C5 G A2026 -38.750 114.778 178.769 1.00 55.66 C
ATOM 18 C6 G A2026 -38.507 114.058 177.581 1.00 59.77 C
ATOM 19 O6 G A2026 -38.496 114.504 176.429 1.00 73.30 O
ATOM 20 N1 G A2026 -38.262 112.702 177.821 1.00 50.99 N
ATOM 21 C2 G A2026 -38.254 112.105 179.064 1.00 50.18 C
ATOM 22 N2 G A2026 -38.004 110.789 179.111 1.00 53.61 N
ATOM 23 N3 G A2026 -38.479 112.752 180.193 1.00 44.29 N
ATOM 24 C4 G A2026 -38.716 114.064 179.957 1.00 48.11 C
ATOM 25 P A A2027 -39.337 114.808 187.044 1.00 62.53 P
ATOM 26 OP1 A A2027 -40.486 113.941 187.416 1.00 59.35 O
ATOM 27 OP2 A A2027 -39.277 116.228 187.442 1.00 55.75 O
ATOM 28 O5' A A2027 -38.001 114.164 187.615 1.00 49.32 O
TER
ATOM 1 O3' C B2555 -37.256 106.470 177.607 1.00 43.69 O
ATOM 2 P A B2556 -36.005 107.361 177.204 1.00 46.22 P
ATOM 3 OP1 A B2556 -35.163 106.552 176.304 1.00 47.40 O
ATOM 4 OP2 A B2556 -35.426 107.913 178.453 1.00 58.64 O
ATOM 5 O5' A B2556 -36.654 108.563 176.398 1.00 42.21 O
ATOM 6 C5' A B2556 -37.502 108.270 175.323 1.00 53.26 C
ATOM 7 C4' A B2556 -37.567 109.476 174.401 1.00 50.97 C
ATOM 8 O4' A B2556 -37.365 110.667 175.200 1.00 49.38 O
ATOM 9 C3' A B2556 -36.529 109.538 173.284 1.00 52.49 C
ATOM 10 O3' A B2556 -37.170 109.948 172.088 1.00 48.04 O
ATOM 11 C2' A B2556 -35.532 110.584 173.776 1.00 53.36 C
ATOM 12 O2' A B2556 -34.934 111.328 172.732 1.00 67.12 O
ATOM 13 C1' A B2556 -36.430 111.502 174.572 1.00 48.11 C
ATOM 14 N9 A B2556 -35.732 112.129 175.667 1.00 56.40 N
ATOM 15 C8 A B2556 -35.250 111.500 176.770 1.00 58.46 C
ATOM 16 N7 A B2556 -34.659 112.308 177.619 1.00 59.36 N
ATOM 17 C5 A B2556 -34.775 113.552 177.029 1.00 52.08 C
ATOM 18 C6 A B2556 -34.357 114.833 177.434 1.00 54.43 C
ATOM 19 N6 A B2556 -33.706 115.065 178.576 1.00 67.29 N
ATOM 20 N1 A B2556 -34.632 115.867 176.614 1.00 49.59 N
ATOM 21 C2 A B2556 -35.281 115.614 175.467 1.00 54.42 C
ATOM 22 N3 A B2556 -35.723 114.454 174.974 1.00 51.53 N
ATOM 23 C4 A B2556 -35.437 113.456 175.820 1.00 54.67 C
ATOM 24 P C B2557 -36.569 109.587 170.651 1.00 61.86 P
ATOM 25 OP1 C B2557 -35.643 108.432 170.715 1.00 61.31 O
ATOM 26 OP2 C B2557 -36.093 110.841 170.033 1.00 80.13 O
ATOM 27 O5' C B2557 -37.928 109.185 169.928 1.00 73.19 O
TER
Atoms:
OP1: (-42.413,117.716,180.736)
OP2: (-43.033,115.212,180.791)
C3': (-39.849,115.395,184.473)
C1': (-39.035,114.638,182.350)
C5': (-42.236,115.064,183.508)
O6: (-38.496,114.504,176.429)
O4': (-40.275,114.012,182.562)
C8: (-39.155,116.196,180.273)
C2: (-38.254,112.105,179.064)
C6: (-38.507,114.058,177.581)
C5: (-38.750,114.778,178.769)
C4: (-38.716,114.064,179.957)
P: (-42.941,116.528,181.464)
C4': (-40.867,114.470,183.806)
C2': (-38.976,115.824,183.298)
O2': (-37.628,116.010,183.673)
N1: (-38.262,112.702,177.821)
N2: (-38.004,110.789,179.111)
N3: (-38.479,112.752,180.193)
N7: (-39.029,116.140,178.966)
N9: (-38.973,114.979,180.932)
O5': (-42.127,116.293,182.823)
O3': (-39.063,114.711,185.462)
OP2: (-43.033,115.212,180.791)
C3': (-39.849,115.395,184.473)
C1': (-39.035,114.638,182.350)
C5': (-42.236,115.064,183.508)
O6: (-38.496,114.504,176.429)
O4': (-40.275,114.012,182.562)
C8: (-39.155,116.196,180.273)
C2: (-38.254,112.105,179.064)
C6: (-38.507,114.058,177.581)
C5: (-38.750,114.778,178.769)
C4: (-38.716,114.064,179.957)
P: (-42.941,116.528,181.464)
C4': (-40.867,114.470,183.806)
C2': (-38.976,115.824,183.298)
O2': (-37.628,116.010,183.673)
N1: (-38.262,112.702,177.821)
N2: (-38.004,110.789,179.111)
N3: (-38.479,112.752,180.193)
N7: (-39.029,116.140,178.966)
N9: (-38.973,114.979,180.932)
O5': (-42.127,116.293,182.823)
O3': (-39.063,114.711,185.462)
OP1: (-35.163,106.552,176.304)
OP2: (-35.426,107.913,178.453)
C3': (-36.529,109.538,173.284)
C1': (-36.430,111.502,174.572)
C5': (-37.502,108.270,175.323)
O4': (-37.365,110.667,175.200)
C8: (-35.250,111.500,176.770)
O2': (-34.934,111.328,172.732)
C6: (-34.357,114.833,177.434)
C5: (-34.775,113.552,177.029)
C4: (-35.437,113.456,175.820)
P: (-36.005,107.361,177.204)
C4': (-37.567,109.476,174.401)
C2': (-35.532,110.584,173.776)
C2: (-35.281,115.614,175.467)
N1: (-34.632,115.867,176.614)
N3: (-35.723,114.454,174.974)
N6: (-33.706,115.065,178.576)
N7: (-34.659,112.308,177.619)
N9: (-35.732,112.129,175.667)
O5': (-36.654,108.563,176.398)
O3': (-37.170,109.948,172.088)
OP2: (-35.426,107.913,178.453)
C3': (-36.529,109.538,173.284)
C1': (-36.430,111.502,174.572)
C5': (-37.502,108.270,175.323)
O4': (-37.365,110.667,175.200)
C8: (-35.250,111.500,176.770)
O2': (-34.934,111.328,172.732)
C6: (-34.357,114.833,177.434)
C5: (-34.775,113.552,177.029)
C4: (-35.437,113.456,175.820)
P: (-36.005,107.361,177.204)
C4': (-37.567,109.476,174.401)
C2': (-35.532,110.584,173.776)
C2: (-35.281,115.614,175.467)
N1: (-34.632,115.867,176.614)
N3: (-35.723,114.454,174.974)
N6: (-33.706,115.065,178.576)
N7: (-34.659,112.308,177.619)
N9: (-35.732,112.129,175.667)
O5': (-36.654,108.563,176.398)
O3': (-37.170,109.948,172.088)
Image (generated by PyMOL):