Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1077:A917
Extra
PDB:
ATOM 1 O3' U A1076 -87.900 52.906 -30.018 1.00 7.33 O
ATOM 2 P G A1077 -89.229 53.373 -29.258 1.00 16.57 P
ATOM 3 OP1 G A1077 -90.062 54.061 -30.279 1.00 16.57 O
ATOM 4 OP2 G A1077 -88.815 54.132 -28.044 1.00 16.57 O
ATOM 5 O5' G A1077 -89.897 51.978 -28.835 1.00 16.57 O
ATOM 6 C5' G A1077 -90.315 51.043 -29.827 1.00 16.57 C
ATOM 7 C4' G A1077 -90.462 49.637 -29.282 1.00 16.57 C
ATOM 8 O4' G A1077 -89.241 49.227 -28.616 1.00 16.57 O
ATOM 9 C3' G A1077 -91.546 49.412 -28.235 1.00 16.57 C
ATOM 10 O3' G A1077 -92.834 49.263 -28.807 1.00 16.57 O
ATOM 11 C2' G A1077 -91.060 48.152 -27.520 1.00 16.57 C
ATOM 12 O2' G A1077 -91.428 46.990 -28.249 1.00 16.57 O
ATOM 13 C1' G A1077 -89.540 48.301 -27.596 1.00 16.57 C
ATOM 14 N9 G A1077 -88.956 48.791 -26.353 1.00 16.24 N
ATOM 15 C8 G A1077 -88.744 50.092 -26.091 1.00 16.24 C
ATOM 16 N7 G A1077 -88.184 50.267 -24.938 1.00 16.24 N
ATOM 17 C5 G A1077 -87.993 49.012 -24.423 1.00 16.24 C
ATOM 18 C6 G A1077 -87.417 48.612 -23.195 1.00 16.24 C
ATOM 19 O6 G A1077 -86.944 49.320 -22.304 1.00 16.24 O
ATOM 20 N1 G A1077 -87.425 47.229 -23.045 1.00 16.24 N
ATOM 21 C2 G A1077 -87.932 46.359 -23.987 1.00 16.24 C
ATOM 22 N2 G A1077 -87.856 45.057 -23.688 1.00 16.24 N
ATOM 23 N3 G A1077 -88.472 46.737 -25.145 1.00 16.24 N
ATOM 24 C4 G A1077 -88.464 48.077 -25.298 1.00 16.24 C
ATOM 25 P A A1078 -94.126 49.862 -28.067 1.00 11.15 P
ATOM 26 OP1 A A1078 -95.089 50.231 -29.122 1.00 11.15 O
ATOM 27 OP2 A A1078 -93.649 50.896 -27.134 1.00 11.15 O
ATOM 28 O5' A A1078 -94.686 48.642 -27.248 1.00 11.15 O
TER
ATOM 1 O3' A B 916 -82.773 42.641 -16.358 1.00 11.11 O
ATOM 2 P A B 917 -83.945 43.397 -15.557 1.00 8.75 P
ATOM 3 OP1 A B 917 -83.286 44.418 -14.691 1.00 8.75 O
ATOM 4 OP2 A B 917 -84.805 42.362 -14.915 1.00 8.75 O
ATOM 5 O5' A B 917 -84.748 44.112 -16.725 1.00 8.75 O
ATOM 6 C5' A B 917 -85.319 45.396 -16.547 1.00 8.75 C
ATOM 7 C4' A B 917 -86.123 45.772 -17.740 1.00 8.75 C
ATOM 8 O4' A B 917 -85.845 44.830 -18.808 1.00 8.75 O
ATOM 9 C3' A B 917 -87.620 45.696 -17.571 1.00 8.75 C
ATOM 10 O3' A B 917 -88.154 46.831 -16.959 1.00 8.75 O
ATOM 11 C2' A B 917 -88.083 45.527 -18.986 1.00 8.75 C
ATOM 12 O2' A B 917 -87.953 46.762 -19.691 1.00 8.75 O
ATOM 13 C1' A B 917 -87.031 44.542 -19.505 1.00 8.75 C
ATOM 14 N9 A B 917 -87.408 43.143 -19.211 1.00 9.30 N
ATOM 15 C8 A B 917 -86.880 42.409 -18.198 1.00 9.30 C
ATOM 16 N7 A B 917 -87.379 41.214 -18.064 1.00 9.30 N
ATOM 17 C5 A B 917 -88.318 41.141 -19.056 1.00 9.30 C
ATOM 18 C6 A B 917 -89.181 40.096 -19.406 1.00 9.30 C
ATOM 19 N6 A B 917 -89.197 38.929 -18.762 1.00 9.30 N
ATOM 20 N1 A B 917 -90.017 40.296 -20.442 1.00 9.30 N
ATOM 21 C2 A B 917 -89.967 41.486 -21.053 1.00 9.30 C
ATOM 22 N3 A B 917 -89.188 42.545 -20.796 1.00 9.30 N
ATOM 23 C4 A B 917 -88.356 42.316 -19.773 1.00 9.30 C
ATOM 24 P U B 918 -89.539 46.718 -16.179 1.00 10.39 P
ATOM 25 OP1 U B 918 -89.834 48.052 -15.614 1.00 10.39 O
ATOM 26 OP2 U B 918 -89.419 45.562 -15.250 1.00 10.39 O
ATOM 27 O5' U B 918 -90.568 46.386 -17.340 1.00 10.39 O
TER
ATOM 2 P G A1077 -89.229 53.373 -29.258 1.00 16.57 P
ATOM 3 OP1 G A1077 -90.062 54.061 -30.279 1.00 16.57 O
ATOM 4 OP2 G A1077 -88.815 54.132 -28.044 1.00 16.57 O
ATOM 5 O5' G A1077 -89.897 51.978 -28.835 1.00 16.57 O
ATOM 6 C5' G A1077 -90.315 51.043 -29.827 1.00 16.57 C
ATOM 7 C4' G A1077 -90.462 49.637 -29.282 1.00 16.57 C
ATOM 8 O4' G A1077 -89.241 49.227 -28.616 1.00 16.57 O
ATOM 9 C3' G A1077 -91.546 49.412 -28.235 1.00 16.57 C
ATOM 10 O3' G A1077 -92.834 49.263 -28.807 1.00 16.57 O
ATOM 11 C2' G A1077 -91.060 48.152 -27.520 1.00 16.57 C
ATOM 12 O2' G A1077 -91.428 46.990 -28.249 1.00 16.57 O
ATOM 13 C1' G A1077 -89.540 48.301 -27.596 1.00 16.57 C
ATOM 14 N9 G A1077 -88.956 48.791 -26.353 1.00 16.24 N
ATOM 15 C8 G A1077 -88.744 50.092 -26.091 1.00 16.24 C
ATOM 16 N7 G A1077 -88.184 50.267 -24.938 1.00 16.24 N
ATOM 17 C5 G A1077 -87.993 49.012 -24.423 1.00 16.24 C
ATOM 18 C6 G A1077 -87.417 48.612 -23.195 1.00 16.24 C
ATOM 19 O6 G A1077 -86.944 49.320 -22.304 1.00 16.24 O
ATOM 20 N1 G A1077 -87.425 47.229 -23.045 1.00 16.24 N
ATOM 21 C2 G A1077 -87.932 46.359 -23.987 1.00 16.24 C
ATOM 22 N2 G A1077 -87.856 45.057 -23.688 1.00 16.24 N
ATOM 23 N3 G A1077 -88.472 46.737 -25.145 1.00 16.24 N
ATOM 24 C4 G A1077 -88.464 48.077 -25.298 1.00 16.24 C
ATOM 25 P A A1078 -94.126 49.862 -28.067 1.00 11.15 P
ATOM 26 OP1 A A1078 -95.089 50.231 -29.122 1.00 11.15 O
ATOM 27 OP2 A A1078 -93.649 50.896 -27.134 1.00 11.15 O
ATOM 28 O5' A A1078 -94.686 48.642 -27.248 1.00 11.15 O
TER
ATOM 1 O3' A B 916 -82.773 42.641 -16.358 1.00 11.11 O
ATOM 2 P A B 917 -83.945 43.397 -15.557 1.00 8.75 P
ATOM 3 OP1 A B 917 -83.286 44.418 -14.691 1.00 8.75 O
ATOM 4 OP2 A B 917 -84.805 42.362 -14.915 1.00 8.75 O
ATOM 5 O5' A B 917 -84.748 44.112 -16.725 1.00 8.75 O
ATOM 6 C5' A B 917 -85.319 45.396 -16.547 1.00 8.75 C
ATOM 7 C4' A B 917 -86.123 45.772 -17.740 1.00 8.75 C
ATOM 8 O4' A B 917 -85.845 44.830 -18.808 1.00 8.75 O
ATOM 9 C3' A B 917 -87.620 45.696 -17.571 1.00 8.75 C
ATOM 10 O3' A B 917 -88.154 46.831 -16.959 1.00 8.75 O
ATOM 11 C2' A B 917 -88.083 45.527 -18.986 1.00 8.75 C
ATOM 12 O2' A B 917 -87.953 46.762 -19.691 1.00 8.75 O
ATOM 13 C1' A B 917 -87.031 44.542 -19.505 1.00 8.75 C
ATOM 14 N9 A B 917 -87.408 43.143 -19.211 1.00 9.30 N
ATOM 15 C8 A B 917 -86.880 42.409 -18.198 1.00 9.30 C
ATOM 16 N7 A B 917 -87.379 41.214 -18.064 1.00 9.30 N
ATOM 17 C5 A B 917 -88.318 41.141 -19.056 1.00 9.30 C
ATOM 18 C6 A B 917 -89.181 40.096 -19.406 1.00 9.30 C
ATOM 19 N6 A B 917 -89.197 38.929 -18.762 1.00 9.30 N
ATOM 20 N1 A B 917 -90.017 40.296 -20.442 1.00 9.30 N
ATOM 21 C2 A B 917 -89.967 41.486 -21.053 1.00 9.30 C
ATOM 22 N3 A B 917 -89.188 42.545 -20.796 1.00 9.30 N
ATOM 23 C4 A B 917 -88.356 42.316 -19.773 1.00 9.30 C
ATOM 24 P U B 918 -89.539 46.718 -16.179 1.00 10.39 P
ATOM 25 OP1 U B 918 -89.834 48.052 -15.614 1.00 10.39 O
ATOM 26 OP2 U B 918 -89.419 45.562 -15.250 1.00 10.39 O
ATOM 27 O5' U B 918 -90.568 46.386 -17.340 1.00 10.39 O
TER
Atoms:
OP1: (-90.062,54.061,-30.279)
OP2: (-88.815,54.132,-28.044)
C3': (-91.546,49.412,-28.235)
C1': (-89.540,48.301,-27.596)
C5': (-90.315,51.043,-29.827)
O6: (-86.944,49.320,-22.304)
O4': (-89.241,49.227,-28.616)
C8: (-88.744,50.092,-26.091)
C2: (-87.932,46.359,-23.987)
C6: (-87.417,48.612,-23.195)
C5: (-87.993,49.012,-24.423)
C4: (-88.464,48.077,-25.298)
P: (-89.229,53.373,-29.258)
C4': (-90.462,49.637,-29.282)
C2': (-91.060,48.152,-27.520)
O2': (-91.428,46.990,-28.249)
N1: (-87.425,47.229,-23.045)
N2: (-87.856,45.057,-23.688)
N3: (-88.472,46.737,-25.145)
N7: (-88.184,50.267,-24.938)
N9: (-88.956,48.791,-26.353)
O5': (-89.897,51.978,-28.835)
O3': (-92.834,49.263,-28.807)
OP2: (-88.815,54.132,-28.044)
C3': (-91.546,49.412,-28.235)
C1': (-89.540,48.301,-27.596)
C5': (-90.315,51.043,-29.827)
O6: (-86.944,49.320,-22.304)
O4': (-89.241,49.227,-28.616)
C8: (-88.744,50.092,-26.091)
C2: (-87.932,46.359,-23.987)
C6: (-87.417,48.612,-23.195)
C5: (-87.993,49.012,-24.423)
C4: (-88.464,48.077,-25.298)
P: (-89.229,53.373,-29.258)
C4': (-90.462,49.637,-29.282)
C2': (-91.060,48.152,-27.520)
O2': (-91.428,46.990,-28.249)
N1: (-87.425,47.229,-23.045)
N2: (-87.856,45.057,-23.688)
N3: (-88.472,46.737,-25.145)
N7: (-88.184,50.267,-24.938)
N9: (-88.956,48.791,-26.353)
O5': (-89.897,51.978,-28.835)
O3': (-92.834,49.263,-28.807)
OP1: (-83.286,44.418,-14.691)
OP2: (-84.805,42.362,-14.915)
C3': (-87.620,45.696,-17.571)
C1': (-87.031,44.542,-19.505)
C5': (-85.319,45.396,-16.547)
O4': (-85.845,44.830,-18.808)
C8: (-86.880,42.409,-18.198)
O2': (-87.953,46.762,-19.691)
C6: (-89.181,40.096,-19.406)
C5: (-88.318,41.141,-19.056)
C4: (-88.356,42.316,-19.773)
P: (-83.945,43.397,-15.557)
C4': (-86.123,45.772,-17.740)
C2': (-88.083,45.527,-18.986)
C2: (-89.967,41.486,-21.053)
N1: (-90.017,40.296,-20.442)
N3: (-89.188,42.545,-20.796)
N6: (-89.197,38.929,-18.762)
N7: (-87.379,41.214,-18.064)
N9: (-87.408,43.143,-19.211)
O5': (-84.748,44.112,-16.725)
O3': (-88.154,46.831,-16.959)
OP2: (-84.805,42.362,-14.915)
C3': (-87.620,45.696,-17.571)
C1': (-87.031,44.542,-19.505)
C5': (-85.319,45.396,-16.547)
O4': (-85.845,44.830,-18.808)
C8: (-86.880,42.409,-18.198)
O2': (-87.953,46.762,-19.691)
C6: (-89.181,40.096,-19.406)
C5: (-88.318,41.141,-19.056)
C4: (-88.356,42.316,-19.773)
P: (-83.945,43.397,-15.557)
C4': (-86.123,45.772,-17.740)
C2': (-88.083,45.527,-18.986)
C2: (-89.967,41.486,-21.053)
N1: (-90.017,40.296,-20.442)
N3: (-89.188,42.545,-20.796)
N6: (-89.197,38.929,-18.762)
N7: (-87.379,41.214,-18.064)
N9: (-87.408,43.143,-19.211)
O5': (-84.748,44.112,-16.725)
O3': (-88.154,46.831,-16.959)
Image (generated by PyMOL):