ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01955:01917

Extra

PDB:
ATOM 1 O3' U A1954 105.968 116.454 99.624 1.00 47.14 O
ATOM 2 P G A1955 106.575 115.820 98.297 1.00 47.59 P
ATOM 3 OP1 G A1955 105.876 116.443 97.143 1.00 49.01 O
ATOM 4 OP2 G A1955 106.604 114.340 98.432 1.00 49.09 O
ATOM 5 O5' G A1955 108.070 116.352 98.324 1.00 49.45 O
ATOM 6 C5' G A1955 108.346 117.758 98.246 1.00 46.62 C
ATOM 7 C4' G A1955 109.823 118.002 98.382 1.00 44.88 C
ATOM 8 O4' G A1955 110.220 117.845 99.769 1.00 44.31 O
ATOM 9 C3' G A1955 110.718 117.031 97.635 1.00 44.05 C
ATOM 10 O3' G A1955 110.808 117.304 96.242 1.00 43.57 O
ATOM 11 C2' G A1955 112.030 117.203 98.381 1.00 45.29 C
ATOM 12 O2' G A1955 112.695 118.403 98.033 1.00 45.16 O
ATOM 13 C1' G A1955 111.526 117.289 99.826 1.00 45.98 C
ATOM 14 N9 G A1955 111.431 115.956 100.415 1.00 48.34 N
ATOM 15 C8 G A1955 110.321 115.147 100.458 1.00 48.81 C
ATOM 16 N7 G A1955 110.559 113.976 100.976 1.00 48.73 N
ATOM 17 C5 G A1955 111.905 114.015 101.312 1.00 49.96 C
ATOM 18 C6 G A1955 112.738 113.022 101.893 1.00 50.88 C
ATOM 19 O6 G A1955 112.445 111.866 102.227 1.00 51.09 O
ATOM 20 N1 G A1955 114.036 113.485 102.068 1.00 50.77 N
ATOM 21 C2 G A1955 114.481 114.736 101.725 1.00 49.43 C
ATOM 22 N2 G A1955 115.771 114.992 101.979 1.00 50.63 N
ATOM 23 N3 G A1955 113.720 115.666 101.175 1.00 49.12 N
ATOM 24 C4 G A1955 112.452 115.240 100.996 1.00 49.45 C
ATOM 25 P A A1956 111.019 116.090 95.203 1.00 45.38 P
ATOM 26 OP1 A A1956 110.465 116.522 93.888 1.00 46.16 O
ATOM 27 OP2 A A1956 110.514 114.849 95.832 1.00 44.31 O
ATOM 28 O5' A A1956 112.606 115.966 95.065 1.00 43.66 O
TER

ATOM 1 O3' G B1916 116.664 104.410 101.001 1.00 61.53 O
ATOM 2 P G B1917 117.406 105.752 101.463 1.00 61.31 P
ATOM 3 OP1 G B1917 118.840 105.647 101.090 1.00 60.23 O
ATOM 4 OP2 G B1917 117.028 106.007 102.879 1.00 58.51 O
ATOM 5 O5' G B1917 116.677 106.859 100.574 1.00 62.89 O
ATOM 6 C5' G B1917 117.403 107.941 99.984 1.00 61.77 C
ATOM 7 C4' G B1917 116.796 109.272 100.382 1.00 61.20 C
ATOM 8 O4' G B1917 115.553 109.514 99.664 1.00 59.72 O
ATOM 9 C3' G B1917 116.452 109.488 101.863 1.00 60.41 C
ATOM 10 O3' G B1917 116.822 110.824 102.192 1.00 61.86 O
ATOM 11 C2' G B1917 114.926 109.458 101.849 1.00 59.16 C
ATOM 12 O2' G B1917 114.365 110.165 102.937 1.00 59.12 O
ATOM 13 C1' G B1917 114.689 110.194 100.538 1.00 59.74 C
ATOM 14 N9 G B1917 113.350 110.289 99.965 1.00 59.63 N
ATOM 15 C8 G B1917 112.256 109.504 100.227 1.00 59.95 C
ATOM 16 N7 G B1917 111.189 109.885 99.579 1.00 59.81 N
ATOM 17 C5 G B1917 111.609 110.978 98.834 1.00 59.86 C
ATOM 18 C6 G B1917 110.891 111.813 97.937 1.00 60.46 C
ATOM 19 O6 G B1917 109.703 111.744 97.603 1.00 60.42 O
ATOM 20 N1 G B1917 111.701 112.811 97.409 1.00 60.38 N
ATOM 21 C2 G B1917 113.027 112.985 97.699 1.00 59.68 C
ATOM 22 N2 G B1917 113.633 114.016 97.093 1.00 58.70 N
ATOM 23 N3 G B1917 113.709 112.210 98.524 1.00 59.19 N
ATOM 24 C4 G B1917 112.940 111.236 99.055 1.00 58.94 C
ATOM 25 P U B1918 117.124 111.232 103.716 1.00 65.10 P
ATOM 26 OP1 U B1918 117.295 110.005 104.543 1.00 66.20 O
ATOM 27 OP2 U B1918 116.120 112.251 104.126 1.00 63.50 O
ATOM 28 O5' U B1918 118.534 111.965 103.598 1.00 65.01 O
TER

Atoms:
OP1: (105.876,116.443,97.143)
OP2: (106.604,114.340,98.432)
C3': (110.718,117.031,97.635)
C1': (111.526,117.289,99.826)
C5': (108.346,117.758,98.246)
O6: (112.445,111.866,102.227)
O4': (110.220,117.845,99.769)
C8: (110.321,115.147,100.458)
C2: (114.481,114.736,101.725)
C6: (112.738,113.022,101.893)
C5: (111.905,114.015,101.312)
C4: (112.452,115.240,100.996)
P: (106.575,115.820,98.297)
C4': (109.823,118.002,98.382)
C2': (112.030,117.203,98.381)
O2': (112.695,118.403,98.033)
N1: (114.036,113.485,102.068)
N2: (115.771,114.992,101.979)
N3: (113.720,115.666,101.175)
N7: (110.559,113.976,100.976)
N9: (111.431,115.956,100.415)
O5': (108.070,116.352,98.324)
O3': (110.808,117.304,96.242)
OP1: (118.840,105.647,101.090)
OP2: (117.028,106.007,102.879)
C3': (116.452,109.488,101.863)
C1': (114.689,110.194,100.538)
C5': (117.403,107.941,99.984)
O6: (109.703,111.744,97.603)
O4': (115.553,109.514,99.664)
C8: (112.256,109.504,100.227)
C2: (113.027,112.985,97.699)
C6: (110.891,111.813,97.937)
C5: (111.609,110.978,98.834)
C4: (112.940,111.236,99.055)
P: (117.406,105.752,101.463)
C4': (116.796,109.272,100.382)
C2': (114.926,109.458,101.849)
O2': (114.365,110.165,102.937)
N1: (111.701,112.811,97.409)
N2: (113.633,114.016,97.093)
N3: (113.709,112.210,98.524)
N7: (111.189,109.885,99.579)
N9: (113.350,110.289,99.965)
O5': (116.677,106.859,100.574)
O3': (116.822,110.824,102.192)
Image (generated by PyMOL):
PyMOL image
show in jmol