Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01173:01110
Extra
PDB:
ATOM 1 O3' C A1172 31.752 90.367 178.002 1.00 84.60 O
ATOM 2 P G A1173 30.414 89.533 177.706 1.00 85.88 P
ATOM 3 OP1 G A1173 29.331 90.523 177.482 1.00 85.94 O
ATOM 4 OP2 G A1173 30.245 88.483 178.741 1.00 85.81 O
ATOM 5 O5' G A1173 30.719 88.811 176.325 1.00 86.57 O
ATOM 6 C5' G A1173 31.244 89.548 175.207 1.00 87.10 C
ATOM 7 C4' G A1173 31.462 88.618 174.044 1.00 86.91 C
ATOM 8 O4' G A1173 32.386 87.577 174.461 1.00 87.04 O
ATOM 9 C3' G A1173 30.208 87.899 173.568 1.00 86.47 C
ATOM 10 O3' G A1173 30.275 87.673 172.174 1.00 86.55 O
ATOM 11 C2' G A1173 30.236 86.595 174.355 1.00 86.22 C
ATOM 12 O2' G A1173 29.558 85.535 173.709 1.00 84.45 O
ATOM 13 C1' G A1173 31.736 86.321 174.464 1.00 86.73 C
ATOM 14 N9 G A1173 32.107 85.638 175.702 1.00 87.16 N
ATOM 15 C8 G A1173 31.449 85.693 176.908 1.00 87.18 C
ATOM 16 N7 G A1173 32.017 84.973 177.835 1.00 88.01 N
ATOM 17 C5 G A1173 33.118 84.408 177.207 1.00 87.50 C
ATOM 18 C6 G A1173 34.111 83.526 177.711 1.00 87.37 C
ATOM 19 O6 G A1173 34.219 83.048 178.849 1.00 87.41 O
ATOM 20 N1 G A1173 35.048 83.207 176.737 1.00 87.37 N
ATOM 21 C2 G A1173 35.039 83.672 175.448 1.00 87.54 C
ATOM 22 N2 G A1173 36.049 83.262 174.667 1.00 87.38 N
ATOM 23 N3 G A1173 34.115 84.484 174.962 1.00 87.65 N
ATOM 24 C4 G A1173 33.191 84.811 175.891 1.00 87.40 C
ATOM 25 P A A1174 29.032 88.089 171.254 1.00 86.69 P
ATOM 26 OP1 A A1174 29.102 89.551 171.018 1.00 86.09 O
ATOM 27 OP2 A A1174 27.799 87.491 171.828 1.00 86.07 O
ATOM 28 O5' A A1174 29.330 87.360 169.880 1.00 87.19 O
TER
ATOM 1 O3' A B1109 36.246 74.448 177.871 1.00 79.87 O
ATOM 2 P G B1110 36.913 75.910 177.900 1.00 78.23 P
ATOM 3 OP1 G B1110 38.310 75.771 177.442 1.00 78.39 O
ATOM 4 OP2 G B1110 36.636 76.532 179.214 1.00 78.83 O
ATOM 5 O5' G B1110 36.093 76.744 176.824 1.00 78.54 O
ATOM 6 C5' G B1110 36.459 76.728 175.440 1.00 77.92 C
ATOM 7 C4' G B1110 36.416 78.128 174.894 1.00 77.41 C
ATOM 8 O4' G B1110 35.048 78.615 174.970 1.00 76.87 O
ATOM 9 C3' G B1110 37.264 79.134 175.657 1.00 77.08 C
ATOM 10 O3' G B1110 37.746 80.120 174.762 1.00 79.46 O
ATOM 11 C2' G B1110 36.262 79.756 176.616 1.00 76.84 C
ATOM 12 O2' G B1110 36.647 81.054 177.014 1.00 77.26 O
ATOM 13 C1' G B1110 34.998 79.783 175.758 1.00 76.81 C
ATOM 14 N9 G B1110 33.763 79.747 176.534 1.00 77.93 N
ATOM 15 C8 G B1110 33.493 78.937 177.608 1.00 78.25 C
ATOM 16 N7 G B1110 32.316 79.148 178.128 1.00 79.11 N
ATOM 17 C5 G B1110 31.768 80.155 177.348 1.00 78.96 C
ATOM 18 C6 G B1110 30.513 80.807 177.446 1.00 79.29 C
ATOM 19 O6 G B1110 29.614 80.627 178.274 1.00 79.70 O
ATOM 20 N1 G B1110 30.355 81.764 176.451 1.00 80.18 N
ATOM 21 C2 G B1110 31.286 82.064 175.490 1.00 80.76 C
ATOM 22 N2 G B1110 30.939 83.026 174.624 1.00 80.64 N
ATOM 23 N3 G B1110 32.467 81.468 175.390 1.00 80.31 N
ATOM 24 C4 G B1110 32.640 80.530 176.348 1.00 79.16 C
ATOM 25 P A B1111 39.178 80.803 175.019 1.00 81.08 P
ATOM 26 OP1 A B1111 39.903 80.009 176.050 1.00 81.75 O
ATOM 27 OP2 A B1111 38.932 82.253 175.247 1.00 80.89 O
ATOM 28 O5' A B1111 39.940 80.607 173.632 1.00 79.76 O
TER
ATOM 2 P G A1173 30.414 89.533 177.706 1.00 85.88 P
ATOM 3 OP1 G A1173 29.331 90.523 177.482 1.00 85.94 O
ATOM 4 OP2 G A1173 30.245 88.483 178.741 1.00 85.81 O
ATOM 5 O5' G A1173 30.719 88.811 176.325 1.00 86.57 O
ATOM 6 C5' G A1173 31.244 89.548 175.207 1.00 87.10 C
ATOM 7 C4' G A1173 31.462 88.618 174.044 1.00 86.91 C
ATOM 8 O4' G A1173 32.386 87.577 174.461 1.00 87.04 O
ATOM 9 C3' G A1173 30.208 87.899 173.568 1.00 86.47 C
ATOM 10 O3' G A1173 30.275 87.673 172.174 1.00 86.55 O
ATOM 11 C2' G A1173 30.236 86.595 174.355 1.00 86.22 C
ATOM 12 O2' G A1173 29.558 85.535 173.709 1.00 84.45 O
ATOM 13 C1' G A1173 31.736 86.321 174.464 1.00 86.73 C
ATOM 14 N9 G A1173 32.107 85.638 175.702 1.00 87.16 N
ATOM 15 C8 G A1173 31.449 85.693 176.908 1.00 87.18 C
ATOM 16 N7 G A1173 32.017 84.973 177.835 1.00 88.01 N
ATOM 17 C5 G A1173 33.118 84.408 177.207 1.00 87.50 C
ATOM 18 C6 G A1173 34.111 83.526 177.711 1.00 87.37 C
ATOM 19 O6 G A1173 34.219 83.048 178.849 1.00 87.41 O
ATOM 20 N1 G A1173 35.048 83.207 176.737 1.00 87.37 N
ATOM 21 C2 G A1173 35.039 83.672 175.448 1.00 87.54 C
ATOM 22 N2 G A1173 36.049 83.262 174.667 1.00 87.38 N
ATOM 23 N3 G A1173 34.115 84.484 174.962 1.00 87.65 N
ATOM 24 C4 G A1173 33.191 84.811 175.891 1.00 87.40 C
ATOM 25 P A A1174 29.032 88.089 171.254 1.00 86.69 P
ATOM 26 OP1 A A1174 29.102 89.551 171.018 1.00 86.09 O
ATOM 27 OP2 A A1174 27.799 87.491 171.828 1.00 86.07 O
ATOM 28 O5' A A1174 29.330 87.360 169.880 1.00 87.19 O
TER
ATOM 1 O3' A B1109 36.246 74.448 177.871 1.00 79.87 O
ATOM 2 P G B1110 36.913 75.910 177.900 1.00 78.23 P
ATOM 3 OP1 G B1110 38.310 75.771 177.442 1.00 78.39 O
ATOM 4 OP2 G B1110 36.636 76.532 179.214 1.00 78.83 O
ATOM 5 O5' G B1110 36.093 76.744 176.824 1.00 78.54 O
ATOM 6 C5' G B1110 36.459 76.728 175.440 1.00 77.92 C
ATOM 7 C4' G B1110 36.416 78.128 174.894 1.00 77.41 C
ATOM 8 O4' G B1110 35.048 78.615 174.970 1.00 76.87 O
ATOM 9 C3' G B1110 37.264 79.134 175.657 1.00 77.08 C
ATOM 10 O3' G B1110 37.746 80.120 174.762 1.00 79.46 O
ATOM 11 C2' G B1110 36.262 79.756 176.616 1.00 76.84 C
ATOM 12 O2' G B1110 36.647 81.054 177.014 1.00 77.26 O
ATOM 13 C1' G B1110 34.998 79.783 175.758 1.00 76.81 C
ATOM 14 N9 G B1110 33.763 79.747 176.534 1.00 77.93 N
ATOM 15 C8 G B1110 33.493 78.937 177.608 1.00 78.25 C
ATOM 16 N7 G B1110 32.316 79.148 178.128 1.00 79.11 N
ATOM 17 C5 G B1110 31.768 80.155 177.348 1.00 78.96 C
ATOM 18 C6 G B1110 30.513 80.807 177.446 1.00 79.29 C
ATOM 19 O6 G B1110 29.614 80.627 178.274 1.00 79.70 O
ATOM 20 N1 G B1110 30.355 81.764 176.451 1.00 80.18 N
ATOM 21 C2 G B1110 31.286 82.064 175.490 1.00 80.76 C
ATOM 22 N2 G B1110 30.939 83.026 174.624 1.00 80.64 N
ATOM 23 N3 G B1110 32.467 81.468 175.390 1.00 80.31 N
ATOM 24 C4 G B1110 32.640 80.530 176.348 1.00 79.16 C
ATOM 25 P A B1111 39.178 80.803 175.019 1.00 81.08 P
ATOM 26 OP1 A B1111 39.903 80.009 176.050 1.00 81.75 O
ATOM 27 OP2 A B1111 38.932 82.253 175.247 1.00 80.89 O
ATOM 28 O5' A B1111 39.940 80.607 173.632 1.00 79.76 O
TER
Atoms:
OP1: (29.331,90.523,177.482)
OP2: (30.245,88.483,178.741)
C3': (30.208,87.899,173.568)
C1': (31.736,86.321,174.464)
C5': (31.244,89.548,175.207)
O6: (34.219,83.048,178.849)
O4': (32.386,87.577,174.461)
C8: (31.449,85.693,176.908)
C2: (35.039,83.672,175.448)
C6: (34.111,83.526,177.711)
C5: (33.118,84.408,177.207)
C4: (33.191,84.811,175.891)
P: (30.414,89.533,177.706)
C4': (31.462,88.618,174.044)
C2': (30.236,86.595,174.355)
O2': (29.558,85.535,173.709)
N1: (35.048,83.207,176.737)
N2: (36.049,83.262,174.667)
N3: (34.115,84.484,174.962)
N7: (32.017,84.973,177.835)
N9: (32.107,85.638,175.702)
O5': (30.719,88.811,176.325)
O3': (30.275,87.673,172.174)
OP2: (30.245,88.483,178.741)
C3': (30.208,87.899,173.568)
C1': (31.736,86.321,174.464)
C5': (31.244,89.548,175.207)
O6: (34.219,83.048,178.849)
O4': (32.386,87.577,174.461)
C8: (31.449,85.693,176.908)
C2: (35.039,83.672,175.448)
C6: (34.111,83.526,177.711)
C5: (33.118,84.408,177.207)
C4: (33.191,84.811,175.891)
P: (30.414,89.533,177.706)
C4': (31.462,88.618,174.044)
C2': (30.236,86.595,174.355)
O2': (29.558,85.535,173.709)
N1: (35.048,83.207,176.737)
N2: (36.049,83.262,174.667)
N3: (34.115,84.484,174.962)
N7: (32.017,84.973,177.835)
N9: (32.107,85.638,175.702)
O5': (30.719,88.811,176.325)
O3': (30.275,87.673,172.174)
OP1: (38.310,75.771,177.442)
OP2: (36.636,76.532,179.214)
C3': (37.264,79.134,175.657)
C1': (34.998,79.783,175.758)
C5': (36.459,76.728,175.440)
O6: (29.614,80.627,178.274)
O4': (35.048,78.615,174.970)
C8: (33.493,78.937,177.608)
C2: (31.286,82.064,175.490)
C6: (30.513,80.807,177.446)
C5: (31.768,80.155,177.348)
C4: (32.640,80.530,176.348)
P: (36.913,75.910,177.900)
C4': (36.416,78.128,174.894)
C2': (36.262,79.756,176.616)
O2': (36.647,81.054,177.014)
N1: (30.355,81.764,176.451)
N2: (30.939,83.026,174.624)
N3: (32.467,81.468,175.390)
N7: (32.316,79.148,178.128)
N9: (33.763,79.747,176.534)
O5': (36.093,76.744,176.824)
O3': (37.746,80.120,174.762)
OP2: (36.636,76.532,179.214)
C3': (37.264,79.134,175.657)
C1': (34.998,79.783,175.758)
C5': (36.459,76.728,175.440)
O6: (29.614,80.627,178.274)
O4': (35.048,78.615,174.970)
C8: (33.493,78.937,177.608)
C2: (31.286,82.064,175.490)
C6: (30.513,80.807,177.446)
C5: (31.768,80.155,177.348)
C4: (32.640,80.530,176.348)
P: (36.913,75.910,177.900)
C4': (36.416,78.128,174.894)
C2': (36.262,79.756,176.616)
O2': (36.647,81.054,177.014)
N1: (30.355,81.764,176.451)
N2: (30.939,83.026,174.624)
N3: (32.467,81.468,175.390)
N7: (32.316,79.148,178.128)
N9: (33.763,79.747,176.534)
O5': (36.093,76.744,176.824)
O3': (37.746,80.120,174.762)
Image (generated by PyMOL):