Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0366:0398
Extra
PDB:
ATOM 1 O3' C A 365 92.379 102.196 5.741 1.00 50.05 O
ATOM 2 P A A 366 92.502 101.675 7.256 1.00 52.19 P
ATOM 3 OP1 A A 366 93.222 102.745 7.995 1.00 51.31 O
ATOM 4 OP2 A A 366 93.051 100.293 7.246 1.00 51.73 O
ATOM 5 O5' A A 366 90.994 101.609 7.776 1.00 49.96 O
ATOM 6 C5' A A 366 90.206 102.810 7.918 1.00 48.51 C
ATOM 7 C4' A A 366 88.793 102.474 8.339 1.00 48.60 C
ATOM 8 O4' A A 366 88.096 101.786 7.268 1.00 49.40 O
ATOM 9 C3' A A 366 88.657 101.547 9.536 1.00 48.20 C
ATOM 10 O3' A A 366 88.788 102.267 10.755 1.00 47.75 O
ATOM 11 C2' A A 366 87.260 100.967 9.346 1.00 48.57 C
ATOM 12 O2' A A 366 86.228 101.822 9.802 1.00 48.01 O
ATOM 13 C1' A A 366 87.192 100.838 7.821 1.00 49.08 C
ATOM 14 N9 A A 366 87.566 99.506 7.341 1.00 49.50 N
ATOM 15 C8 A A 366 88.826 99.010 7.094 1.00 49.53 C
ATOM 16 N7 A A 366 88.835 97.766 6.683 1.00 48.97 N
ATOM 17 C5 A A 366 87.494 97.417 6.655 1.00 49.77 C
ATOM 18 C6 A A 366 86.838 96.224 6.314 1.00 50.65 C
ATOM 19 N6 A A 366 87.474 95.115 5.930 1.00 51.03 N
ATOM 20 N1 A A 366 85.487 96.207 6.387 1.00 50.75 N
ATOM 21 C2 A A 366 84.852 97.319 6.790 1.00 49.78 C
ATOM 22 N3 A A 366 85.359 98.497 7.145 1.00 49.36 N
ATOM 23 C4 A A 366 86.700 98.480 7.053 1.00 49.57 C
ATOM 24 P G A 367 89.118 101.483 12.115 1.00 46.24 P
ATOM 25 OP1 G A 367 90.333 100.665 11.896 1.00 46.26 O
ATOM 26 OP2 G A 367 87.867 100.835 12.585 1.00 48.21 O
ATOM 27 O5' G A 367 89.490 102.642 13.131 1.00 44.46 O
TER
ATOM 1 O3' U B 397 92.496 92.866 9.079 1.00 59.07 O
ATOM 2 P A B 398 92.340 92.469 7.538 1.00 58.41 P
ATOM 3 OP1 A B 398 93.369 91.457 7.166 1.00 57.91 O
ATOM 4 OP2 A B 398 92.224 93.726 6.752 1.00 59.02 O
ATOM 5 O5' A B 398 90.918 91.770 7.525 1.00 58.34 O
ATOM 6 C5' A B 398 90.678 90.599 8.307 1.00 56.40 C
ATOM 7 C4' A B 398 89.211 90.283 8.306 1.00 56.16 C
ATOM 8 O4' A B 398 88.523 91.189 9.208 1.00 55.99 O
ATOM 9 C3' A B 398 88.531 90.428 6.949 1.00 55.75 C
ATOM 10 O3' A B 398 87.550 89.413 6.797 1.00 57.94 O
ATOM 11 C2' A B 398 87.885 91.806 7.055 1.00 54.86 C
ATOM 12 O2' A B 398 86.763 92.003 6.221 1.00 54.24 O
ATOM 13 C1' A B 398 87.469 91.820 8.519 1.00 55.58 C
ATOM 14 N9 A B 398 87.287 93.162 9.060 1.00 56.32 N
ATOM 15 C8 A B 398 88.234 94.125 9.319 1.00 56.38 C
ATOM 16 N7 A B 398 87.733 95.246 9.774 1.00 56.43 N
ATOM 17 C5 A B 398 86.366 95.004 9.825 1.00 57.46 C
ATOM 18 C6 A B 398 85.278 95.802 10.214 1.00 58.13 C
ATOM 19 N6 A B 398 85.406 97.063 10.642 1.00 59.10 N
ATOM 20 N1 A B 398 84.039 95.256 10.147 1.00 57.54 N
ATOM 21 C2 A B 398 83.918 93.996 9.715 1.00 55.82 C
ATOM 22 N3 A B 398 84.863 93.148 9.320 1.00 56.59 N
ATOM 23 C4 A B 398 86.080 93.721 9.398 1.00 57.16 C
ATOM 24 P A B 399 87.804 88.221 5.749 1.00 58.35 P
ATOM 25 OP1 A B 399 88.332 88.819 4.491 1.00 58.18 O
ATOM 26 OP2 A B 399 86.576 87.390 5.705 1.00 58.22 O
ATOM 27 O5' A B 399 88.982 87.380 6.413 1.00 57.96 O
TER
ATOM 2 P A A 366 92.502 101.675 7.256 1.00 52.19 P
ATOM 3 OP1 A A 366 93.222 102.745 7.995 1.00 51.31 O
ATOM 4 OP2 A A 366 93.051 100.293 7.246 1.00 51.73 O
ATOM 5 O5' A A 366 90.994 101.609 7.776 1.00 49.96 O
ATOM 6 C5' A A 366 90.206 102.810 7.918 1.00 48.51 C
ATOM 7 C4' A A 366 88.793 102.474 8.339 1.00 48.60 C
ATOM 8 O4' A A 366 88.096 101.786 7.268 1.00 49.40 O
ATOM 9 C3' A A 366 88.657 101.547 9.536 1.00 48.20 C
ATOM 10 O3' A A 366 88.788 102.267 10.755 1.00 47.75 O
ATOM 11 C2' A A 366 87.260 100.967 9.346 1.00 48.57 C
ATOM 12 O2' A A 366 86.228 101.822 9.802 1.00 48.01 O
ATOM 13 C1' A A 366 87.192 100.838 7.821 1.00 49.08 C
ATOM 14 N9 A A 366 87.566 99.506 7.341 1.00 49.50 N
ATOM 15 C8 A A 366 88.826 99.010 7.094 1.00 49.53 C
ATOM 16 N7 A A 366 88.835 97.766 6.683 1.00 48.97 N
ATOM 17 C5 A A 366 87.494 97.417 6.655 1.00 49.77 C
ATOM 18 C6 A A 366 86.838 96.224 6.314 1.00 50.65 C
ATOM 19 N6 A A 366 87.474 95.115 5.930 1.00 51.03 N
ATOM 20 N1 A A 366 85.487 96.207 6.387 1.00 50.75 N
ATOM 21 C2 A A 366 84.852 97.319 6.790 1.00 49.78 C
ATOM 22 N3 A A 366 85.359 98.497 7.145 1.00 49.36 N
ATOM 23 C4 A A 366 86.700 98.480 7.053 1.00 49.57 C
ATOM 24 P G A 367 89.118 101.483 12.115 1.00 46.24 P
ATOM 25 OP1 G A 367 90.333 100.665 11.896 1.00 46.26 O
ATOM 26 OP2 G A 367 87.867 100.835 12.585 1.00 48.21 O
ATOM 27 O5' G A 367 89.490 102.642 13.131 1.00 44.46 O
TER
ATOM 1 O3' U B 397 92.496 92.866 9.079 1.00 59.07 O
ATOM 2 P A B 398 92.340 92.469 7.538 1.00 58.41 P
ATOM 3 OP1 A B 398 93.369 91.457 7.166 1.00 57.91 O
ATOM 4 OP2 A B 398 92.224 93.726 6.752 1.00 59.02 O
ATOM 5 O5' A B 398 90.918 91.770 7.525 1.00 58.34 O
ATOM 6 C5' A B 398 90.678 90.599 8.307 1.00 56.40 C
ATOM 7 C4' A B 398 89.211 90.283 8.306 1.00 56.16 C
ATOM 8 O4' A B 398 88.523 91.189 9.208 1.00 55.99 O
ATOM 9 C3' A B 398 88.531 90.428 6.949 1.00 55.75 C
ATOM 10 O3' A B 398 87.550 89.413 6.797 1.00 57.94 O
ATOM 11 C2' A B 398 87.885 91.806 7.055 1.00 54.86 C
ATOM 12 O2' A B 398 86.763 92.003 6.221 1.00 54.24 O
ATOM 13 C1' A B 398 87.469 91.820 8.519 1.00 55.58 C
ATOM 14 N9 A B 398 87.287 93.162 9.060 1.00 56.32 N
ATOM 15 C8 A B 398 88.234 94.125 9.319 1.00 56.38 C
ATOM 16 N7 A B 398 87.733 95.246 9.774 1.00 56.43 N
ATOM 17 C5 A B 398 86.366 95.004 9.825 1.00 57.46 C
ATOM 18 C6 A B 398 85.278 95.802 10.214 1.00 58.13 C
ATOM 19 N6 A B 398 85.406 97.063 10.642 1.00 59.10 N
ATOM 20 N1 A B 398 84.039 95.256 10.147 1.00 57.54 N
ATOM 21 C2 A B 398 83.918 93.996 9.715 1.00 55.82 C
ATOM 22 N3 A B 398 84.863 93.148 9.320 1.00 56.59 N
ATOM 23 C4 A B 398 86.080 93.721 9.398 1.00 57.16 C
ATOM 24 P A B 399 87.804 88.221 5.749 1.00 58.35 P
ATOM 25 OP1 A B 399 88.332 88.819 4.491 1.00 58.18 O
ATOM 26 OP2 A B 399 86.576 87.390 5.705 1.00 58.22 O
ATOM 27 O5' A B 399 88.982 87.380 6.413 1.00 57.96 O
TER
Atoms:
OP1: (93.222,102.745,7.995)
OP2: (93.051,100.293,7.246)
C3': (88.657,101.547,9.536)
C1': (87.192,100.838,7.821)
C5': (90.206,102.810,7.918)
O4': (88.096,101.786,7.268)
C8: (88.826,99.010,7.094)
O2': (86.228,101.822,9.802)
C6: (86.838,96.224,6.314)
C5: (87.494,97.417,6.655)
C4: (86.700,98.480,7.053)
P: (92.502,101.675,7.256)
C4': (88.793,102.474,8.339)
C2': (87.260,100.967,9.346)
C2: (84.852,97.319,6.790)
N1: (85.487,96.207,6.387)
N3: (85.359,98.497,7.145)
N6: (87.474,95.115,5.930)
N7: (88.835,97.766,6.683)
N9: (87.566,99.506,7.341)
O5': (90.994,101.609,7.776)
O3': (88.788,102.267,10.755)
OP2: (93.051,100.293,7.246)
C3': (88.657,101.547,9.536)
C1': (87.192,100.838,7.821)
C5': (90.206,102.810,7.918)
O4': (88.096,101.786,7.268)
C8: (88.826,99.010,7.094)
O2': (86.228,101.822,9.802)
C6: (86.838,96.224,6.314)
C5: (87.494,97.417,6.655)
C4: (86.700,98.480,7.053)
P: (92.502,101.675,7.256)
C4': (88.793,102.474,8.339)
C2': (87.260,100.967,9.346)
C2: (84.852,97.319,6.790)
N1: (85.487,96.207,6.387)
N3: (85.359,98.497,7.145)
N6: (87.474,95.115,5.930)
N7: (88.835,97.766,6.683)
N9: (87.566,99.506,7.341)
O5': (90.994,101.609,7.776)
O3': (88.788,102.267,10.755)
OP1: (93.369,91.457,7.166)
OP2: (92.224,93.726,6.752)
C3': (88.531,90.428,6.949)
C1': (87.469,91.820,8.519)
C5': (90.678,90.599,8.307)
O4': (88.523,91.189,9.208)
C8: (88.234,94.125,9.319)
O2': (86.763,92.003,6.221)
C6: (85.278,95.802,10.214)
C5: (86.366,95.004,9.825)
C4: (86.080,93.721,9.398)
P: (92.340,92.469,7.538)
C4': (89.211,90.283,8.306)
C2': (87.885,91.806,7.055)
C2: (83.918,93.996,9.715)
N1: (84.039,95.256,10.147)
N3: (84.863,93.148,9.320)
N6: (85.406,97.063,10.642)
N7: (87.733,95.246,9.774)
N9: (87.287,93.162,9.060)
O5': (90.918,91.770,7.525)
O3': (87.550,89.413,6.797)
OP2: (92.224,93.726,6.752)
C3': (88.531,90.428,6.949)
C1': (87.469,91.820,8.519)
C5': (90.678,90.599,8.307)
O4': (88.523,91.189,9.208)
C8: (88.234,94.125,9.319)
O2': (86.763,92.003,6.221)
C6: (85.278,95.802,10.214)
C5: (86.366,95.004,9.825)
C4: (86.080,93.721,9.398)
P: (92.340,92.469,7.538)
C4': (89.211,90.283,8.306)
C2': (87.885,91.806,7.055)
C2: (83.918,93.996,9.715)
N1: (84.039,95.256,10.147)
N3: (84.863,93.148,9.320)
N6: (85.406,97.063,10.642)
N7: (87.733,95.246,9.774)
N9: (87.287,93.162,9.060)
O5': (90.918,91.770,7.525)
O3': (87.550,89.413,6.797)
Image (generated by PyMOL):