Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52549:52404
Extra
PDB:
ATOM 1 O3' U A2548 153.034 -37.247 233.636 1.00 43.92 O
ATOM 2 P G A2549 151.951 -36.533 234.561 1.00 44.20 P
ATOM 3 OP1 G A2549 150.962 -37.575 234.943 1.00 44.41 O
ATOM 4 OP2 G A2549 151.492 -35.348 233.822 1.00 44.01 O
ATOM 5 O5' G A2549 152.775 -36.061 235.836 1.00 43.95 O
ATOM 6 C5' G A2549 153.157 -36.980 236.856 1.00 44.06 C
ATOM 7 C4' G A2549 153.601 -36.271 238.126 1.00 43.77 C
ATOM 8 O4' G A2549 154.017 -37.262 239.107 1.00 43.91 O
ATOM 9 C3' G A2549 154.785 -35.316 237.976 1.00 43.58 C
ATOM 10 O3' G A2549 154.677 -34.282 238.940 1.00 43.25 O
ATOM 11 C2' G A2549 155.962 -36.207 238.329 1.00 43.77 C
ATOM 12 O2' G A2549 157.097 -35.518 238.748 1.00 43.60 O
ATOM 13 C1' G A2549 155.378 -37.066 239.443 1.00 43.86 C
ATOM 14 N9 G A2549 155.979 -38.380 239.530 1.00 44.18 N
ATOM 15 C8 G A2549 155.624 -39.458 238.756 1.00 44.51 C
ATOM 16 N7 G A2549 156.296 -40.544 239.020 1.00 44.77 N
ATOM 17 C5 G A2549 157.125 -40.150 240.067 1.00 44.60 C
ATOM 18 C6 G A2549 158.086 -40.886 240.809 1.00 44.75 C
ATOM 19 O6 G A2549 158.418 -42.048 240.684 1.00 45.07 O
ATOM 20 N1 G A2549 158.697 -40.127 241.770 1.00 44.49 N
ATOM 21 C2 G A2549 158.410 -38.789 242.000 1.00 44.13 C
ATOM 22 N2 G A2549 159.097 -38.179 242.988 1.00 43.93 N
ATOM 23 N3 G A2549 157.508 -38.090 241.320 1.00 43.99 N
ATOM 24 C4 G A2549 156.915 -38.824 240.391 1.00 44.23 C
ATOM 25 P C A2550 154.856 -32.751 238.506 1.00 45.51 P
ATOM 26 OP1 C A2550 155.763 -32.726 237.338 1.00 45.64 O
ATOM 27 OP2 C A2550 155.226 -31.967 239.730 1.00 45.23 O
ATOM 28 O5' C A2550 153.416 -32.354 238.068 1.00 45.45 O
TER
ATOM 1 O3' U B2403 159.436 -42.363 250.064 1.00 43.77 O
ATOM 2 P G B2404 160.460 -42.085 248.862 1.00 42.21 P
ATOM 3 OP1 G B2404 161.621 -43.029 249.040 1.00 42.50 O
ATOM 4 OP2 G B2404 160.715 -40.620 248.820 1.00 41.84 O
ATOM 5 O5' G B2404 159.606 -42.500 247.612 1.00 42.34 O
ATOM 6 C5' G B2404 159.297 -43.857 247.358 1.00 42.71 C
ATOM 7 C4' G B2404 159.001 -44.055 245.903 1.00 42.83 C
ATOM 8 O4' G B2404 157.928 -43.159 245.534 1.00 42.58 O
ATOM 9 C3' G B2404 160.156 -43.705 244.980 1.00 42.83 C
ATOM 10 O3' G B2404 159.980 -44.366 243.759 1.00 43.09 O
ATOM 11 C2' G B2404 159.931 -42.227 244.744 1.00 42.44 C
ATOM 12 O2' G B2404 160.553 -41.728 243.582 1.00 42.42 O
ATOM 13 C1' G B2404 158.415 -42.187 244.629 1.00 42.39 C
ATOM 14 N9 G B2404 157.823 -40.901 244.972 1.00 42.02 N
ATOM 15 C8 G B2404 158.152 -39.995 245.940 1.00 41.74 C
ATOM 16 N7 G B2404 157.392 -38.912 245.947 1.00 41.45 N
ATOM 17 C5 G B2404 156.507 -39.154 244.912 1.00 41.55 C
ATOM 18 C6 G B2404 155.427 -38.382 244.441 1.00 41.37 C
ATOM 19 O6 G B2404 155.057 -37.275 244.858 1.00 41.07 O
ATOM 20 N1 G B2404 154.779 -39.001 243.362 1.00 41.58 N
ATOM 21 C2 G B2404 155.085 -40.224 242.806 1.00 41.93 C
ATOM 22 N2 G B2404 154.305 -40.623 241.779 1.00 42.10 N
ATOM 23 N3 G B2404 156.105 -40.966 243.239 1.00 42.11 N
ATOM 24 C4 G B2404 156.755 -40.370 244.288 1.00 41.90 C
ATOM 25 P U B2405 160.300 -45.922 243.601 1.00 49.20 P
ATOM 26 OP1 U B2405 160.577 -46.111 242.153 1.00 49.37 O
ATOM 27 OP2 U B2405 159.194 -46.706 244.229 1.00 49.33 O
ATOM 28 O5' U B2405 161.604 -46.131 244.438 1.00 49.25 O
TER
ATOM 2 P G A2549 151.951 -36.533 234.561 1.00 44.20 P
ATOM 3 OP1 G A2549 150.962 -37.575 234.943 1.00 44.41 O
ATOM 4 OP2 G A2549 151.492 -35.348 233.822 1.00 44.01 O
ATOM 5 O5' G A2549 152.775 -36.061 235.836 1.00 43.95 O
ATOM 6 C5' G A2549 153.157 -36.980 236.856 1.00 44.06 C
ATOM 7 C4' G A2549 153.601 -36.271 238.126 1.00 43.77 C
ATOM 8 O4' G A2549 154.017 -37.262 239.107 1.00 43.91 O
ATOM 9 C3' G A2549 154.785 -35.316 237.976 1.00 43.58 C
ATOM 10 O3' G A2549 154.677 -34.282 238.940 1.00 43.25 O
ATOM 11 C2' G A2549 155.962 -36.207 238.329 1.00 43.77 C
ATOM 12 O2' G A2549 157.097 -35.518 238.748 1.00 43.60 O
ATOM 13 C1' G A2549 155.378 -37.066 239.443 1.00 43.86 C
ATOM 14 N9 G A2549 155.979 -38.380 239.530 1.00 44.18 N
ATOM 15 C8 G A2549 155.624 -39.458 238.756 1.00 44.51 C
ATOM 16 N7 G A2549 156.296 -40.544 239.020 1.00 44.77 N
ATOM 17 C5 G A2549 157.125 -40.150 240.067 1.00 44.60 C
ATOM 18 C6 G A2549 158.086 -40.886 240.809 1.00 44.75 C
ATOM 19 O6 G A2549 158.418 -42.048 240.684 1.00 45.07 O
ATOM 20 N1 G A2549 158.697 -40.127 241.770 1.00 44.49 N
ATOM 21 C2 G A2549 158.410 -38.789 242.000 1.00 44.13 C
ATOM 22 N2 G A2549 159.097 -38.179 242.988 1.00 43.93 N
ATOM 23 N3 G A2549 157.508 -38.090 241.320 1.00 43.99 N
ATOM 24 C4 G A2549 156.915 -38.824 240.391 1.00 44.23 C
ATOM 25 P C A2550 154.856 -32.751 238.506 1.00 45.51 P
ATOM 26 OP1 C A2550 155.763 -32.726 237.338 1.00 45.64 O
ATOM 27 OP2 C A2550 155.226 -31.967 239.730 1.00 45.23 O
ATOM 28 O5' C A2550 153.416 -32.354 238.068 1.00 45.45 O
TER
ATOM 1 O3' U B2403 159.436 -42.363 250.064 1.00 43.77 O
ATOM 2 P G B2404 160.460 -42.085 248.862 1.00 42.21 P
ATOM 3 OP1 G B2404 161.621 -43.029 249.040 1.00 42.50 O
ATOM 4 OP2 G B2404 160.715 -40.620 248.820 1.00 41.84 O
ATOM 5 O5' G B2404 159.606 -42.500 247.612 1.00 42.34 O
ATOM 6 C5' G B2404 159.297 -43.857 247.358 1.00 42.71 C
ATOM 7 C4' G B2404 159.001 -44.055 245.903 1.00 42.83 C
ATOM 8 O4' G B2404 157.928 -43.159 245.534 1.00 42.58 O
ATOM 9 C3' G B2404 160.156 -43.705 244.980 1.00 42.83 C
ATOM 10 O3' G B2404 159.980 -44.366 243.759 1.00 43.09 O
ATOM 11 C2' G B2404 159.931 -42.227 244.744 1.00 42.44 C
ATOM 12 O2' G B2404 160.553 -41.728 243.582 1.00 42.42 O
ATOM 13 C1' G B2404 158.415 -42.187 244.629 1.00 42.39 C
ATOM 14 N9 G B2404 157.823 -40.901 244.972 1.00 42.02 N
ATOM 15 C8 G B2404 158.152 -39.995 245.940 1.00 41.74 C
ATOM 16 N7 G B2404 157.392 -38.912 245.947 1.00 41.45 N
ATOM 17 C5 G B2404 156.507 -39.154 244.912 1.00 41.55 C
ATOM 18 C6 G B2404 155.427 -38.382 244.441 1.00 41.37 C
ATOM 19 O6 G B2404 155.057 -37.275 244.858 1.00 41.07 O
ATOM 20 N1 G B2404 154.779 -39.001 243.362 1.00 41.58 N
ATOM 21 C2 G B2404 155.085 -40.224 242.806 1.00 41.93 C
ATOM 22 N2 G B2404 154.305 -40.623 241.779 1.00 42.10 N
ATOM 23 N3 G B2404 156.105 -40.966 243.239 1.00 42.11 N
ATOM 24 C4 G B2404 156.755 -40.370 244.288 1.00 41.90 C
ATOM 25 P U B2405 160.300 -45.922 243.601 1.00 49.20 P
ATOM 26 OP1 U B2405 160.577 -46.111 242.153 1.00 49.37 O
ATOM 27 OP2 U B2405 159.194 -46.706 244.229 1.00 49.33 O
ATOM 28 O5' U B2405 161.604 -46.131 244.438 1.00 49.25 O
TER
Atoms:
OP1: (150.962,-37.575,234.943)
OP2: (151.492,-35.348,233.822)
C3': (154.785,-35.316,237.976)
C1': (155.378,-37.066,239.443)
C5': (153.157,-36.980,236.856)
O6: (158.418,-42.048,240.684)
O4': (154.017,-37.262,239.107)
C8: (155.624,-39.458,238.756)
C2: (158.410,-38.789,242.000)
C6: (158.086,-40.886,240.809)
C5: (157.125,-40.150,240.067)
C4: (156.915,-38.824,240.391)
P: (151.951,-36.533,234.561)
C4': (153.601,-36.271,238.126)
C2': (155.962,-36.207,238.329)
O2': (157.097,-35.518,238.748)
N1: (158.697,-40.127,241.770)
N2: (159.097,-38.179,242.988)
N3: (157.508,-38.090,241.320)
N7: (156.296,-40.544,239.020)
N9: (155.979,-38.380,239.530)
O5': (152.775,-36.061,235.836)
O3': (154.677,-34.282,238.940)
OP2: (151.492,-35.348,233.822)
C3': (154.785,-35.316,237.976)
C1': (155.378,-37.066,239.443)
C5': (153.157,-36.980,236.856)
O6: (158.418,-42.048,240.684)
O4': (154.017,-37.262,239.107)
C8: (155.624,-39.458,238.756)
C2: (158.410,-38.789,242.000)
C6: (158.086,-40.886,240.809)
C5: (157.125,-40.150,240.067)
C4: (156.915,-38.824,240.391)
P: (151.951,-36.533,234.561)
C4': (153.601,-36.271,238.126)
C2': (155.962,-36.207,238.329)
O2': (157.097,-35.518,238.748)
N1: (158.697,-40.127,241.770)
N2: (159.097,-38.179,242.988)
N3: (157.508,-38.090,241.320)
N7: (156.296,-40.544,239.020)
N9: (155.979,-38.380,239.530)
O5': (152.775,-36.061,235.836)
O3': (154.677,-34.282,238.940)
OP1: (161.621,-43.029,249.040)
OP2: (160.715,-40.620,248.820)
C3': (160.156,-43.705,244.980)
C1': (158.415,-42.187,244.629)
C5': (159.297,-43.857,247.358)
O6: (155.057,-37.275,244.858)
O4': (157.928,-43.159,245.534)
C8: (158.152,-39.995,245.940)
C2: (155.085,-40.224,242.806)
C6: (155.427,-38.382,244.441)
C5: (156.507,-39.154,244.912)
C4: (156.755,-40.370,244.288)
P: (160.460,-42.085,248.862)
C4': (159.001,-44.055,245.903)
C2': (159.931,-42.227,244.744)
O2': (160.553,-41.728,243.582)
N1: (154.779,-39.001,243.362)
N2: (154.305,-40.623,241.779)
N3: (156.105,-40.966,243.239)
N7: (157.392,-38.912,245.947)
N9: (157.823,-40.901,244.972)
O5': (159.606,-42.500,247.612)
O3': (159.980,-44.366,243.759)
OP2: (160.715,-40.620,248.820)
C3': (160.156,-43.705,244.980)
C1': (158.415,-42.187,244.629)
C5': (159.297,-43.857,247.358)
O6: (155.057,-37.275,244.858)
O4': (157.928,-43.159,245.534)
C8: (158.152,-39.995,245.940)
C2: (155.085,-40.224,242.806)
C6: (155.427,-38.382,244.441)
C5: (156.507,-39.154,244.912)
C4: (156.755,-40.370,244.288)
P: (160.460,-42.085,248.862)
C4': (159.001,-44.055,245.903)
C2': (159.931,-42.227,244.744)
O2': (160.553,-41.728,243.582)
N1: (154.779,-39.001,243.362)
N2: (154.305,-40.623,241.779)
N3: (156.105,-40.966,243.239)
N7: (157.392,-38.912,245.947)
N9: (157.823,-40.901,244.972)
O5': (159.606,-42.500,247.612)
O3': (159.980,-44.366,243.759)
Image (generated by PyMOL):