ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A2019:A2448

Extra

PDB:
ATOM 1 O3' G A2018 52.488 112.462 108.068 1.00 35.13 O
ATOM 2 P G A2019 52.798 114.024 108.281 1.00 34.99 P
ATOM 3 OP1 G A2019 53.518 114.474 107.074 1.00 33.86 O
ATOM 4 OP2 G A2019 53.395 114.242 109.610 1.00 36.55 O
ATOM 5 O5' G A2019 51.378 114.729 108.303 1.00 35.37 O
ATOM 6 C5' G A2019 50.839 115.313 107.117 1.00 35.96 C
ATOM 7 C4' G A2019 50.853 116.815 107.227 1.00 35.49 C
ATOM 8 O4' G A2019 52.116 117.294 107.757 1.00 35.08 O
ATOM 9 C3' G A2019 50.685 117.450 105.864 1.00 34.54 C
ATOM 10 O3' G A2019 49.922 118.621 106.022 1.00 31.74 O
ATOM 11 C2' G A2019 52.111 117.792 105.474 1.00 35.62 C
ATOM 12 O2' G A2019 52.205 118.846 104.554 1.00 37.97 O
ATOM 13 C1' G A2019 52.696 118.177 106.830 1.00 35.46 C
ATOM 14 N9 G A2019 54.153 118.119 106.934 1.00 34.19 N
ATOM 15 C8 G A2019 55.046 117.795 105.941 1.00 34.71 C
ATOM 16 N7 G A2019 56.290 117.961 106.296 1.00 34.16 N
ATOM 17 C5 G A2019 56.215 118.393 107.614 1.00 33.16 C
ATOM 18 C6 G A2019 57.235 118.762 108.522 1.00 31.87 C
ATOM 19 O6 G A2019 58.444 118.829 108.325 1.00 32.95 O
ATOM 20 N1 G A2019 56.717 119.102 109.769 1.00 30.72 N
ATOM 21 C2 G A2019 55.389 119.102 110.097 1.00 30.90 C
ATOM 22 N2 G A2019 55.083 119.430 111.368 1.00 30.72 N
ATOM 23 N3 G A2019 54.427 118.796 109.248 1.00 32.32 N
ATOM 24 C4 G A2019 54.907 118.456 108.035 1.00 33.21 C
ATOM 25 P A A2020 48.364 118.586 105.711 1.00 29.42 P
ATOM 26 OP1 A A2020 47.638 118.167 106.931 1.00 27.18 O
ATOM 27 OP2 A A2020 48.208 117.825 104.476 1.00 30.15 O
ATOM 28 O5' A A2020 48.029 120.098 105.389 1.00 30.02 O
TER

ATOM 1 O3' G B2447 56.861 122.872 115.218 1.00 25.33 O
ATOM 2 P U B2448 57.207 123.669 113.869 1.00 24.80 P
ATOM 3 OP1 U B2448 57.383 125.099 114.181 1.00 26.60 O
ATOM 4 OP2 U B2448 56.288 123.287 112.808 1.00 26.05 O
ATOM 5 O5' U B2448 58.616 123.086 113.437 1.00 25.10 O
ATOM 6 C5' U B2448 58.870 121.681 113.465 1.00 26.26 C
ATOM 7 C4' U B2448 59.590 121.257 112.218 1.00 27.11 C
ATOM 8 O4' U B2448 58.644 121.011 111.151 1.00 28.45 O
ATOM 9 C3' U B2448 60.608 122.235 111.653 1.00 27.33 C
ATOM 10 O3' U B2448 61.599 121.430 111.063 1.00 26.26 O
ATOM 11 C2' U B2448 59.840 122.896 110.513 1.00 28.40 C
ATOM 12 O2' U B2448 60.724 123.381 109.527 1.00 27.83 O
ATOM 13 C1' U B2448 59.065 121.691 109.992 1.00 29.47 C
ATOM 14 N1 U B2448 57.890 121.893 109.139 1.00 32.71 N
ATOM 15 C2 U B2448 58.027 121.654 107.782 1.00 33.35 C
ATOM 16 O2 U B2448 59.101 121.420 107.247 1.00 31.50 O
ATOM 17 N3 U B2448 56.856 121.706 107.071 1.00 34.16 N
ATOM 18 C4 U B2448 55.599 122.000 107.558 1.00 35.21 C
ATOM 19 O4 U B2448 54.633 121.958 106.800 1.00 36.40 O
ATOM 20 C5 U B2448 55.557 122.310 108.959 1.00 35.15 C
ATOM 21 C6 U B2448 56.678 122.252 109.680 1.00 33.06 C
ATOM 22 P C B2449 63.129 121.839 111.153 1.00 25.39 P
ATOM 23 OP1 C B2449 63.279 123.056 111.981 1.00 27.37 O
ATOM 24 OP2 C B2449 63.595 121.851 109.757 1.00 24.92 O
ATOM 25 O5' C B2449 63.765 120.615 111.941 1.00 25.16 O
TER

Atoms:
OP1: (53.518,114.474,107.074)
OP2: (53.395,114.242,109.610)
C3': (50.685,117.450,105.864)
C1': (52.696,118.177,106.830)
C5': (50.839,115.313,107.117)
O6: (58.444,118.829,108.325)
O4': (52.116,117.294,107.757)
C8: (55.046,117.795,105.941)
C2: (55.389,119.102,110.097)
C6: (57.235,118.762,108.522)
C5: (56.215,118.393,107.614)
C4: (54.907,118.456,108.035)
P: (52.798,114.024,108.281)
C4': (50.853,116.815,107.227)
C2': (52.111,117.792,105.474)
O2': (52.205,118.846,104.554)
N1: (56.717,119.102,109.769)
N2: (55.083,119.430,111.368)
N3: (54.427,118.796,109.248)
N7: (56.290,117.961,106.296)
N9: (54.153,118.119,106.934)
O5': (51.378,114.729,108.303)
O3': (49.922,118.621,106.022)
C4: (55.599,122.000,107.558)
N3: (56.856,121.706,107.071)
OP1: (57.383,125.099,114.181)
OP2: (56.288,123.287,112.808)
C2: (58.027,121.654,107.782)
C1': (59.065,121.691,109.992)
C3': (60.608,122.235,111.653)
O5': (58.616,123.086,113.437)
O4': (58.644,121.011,111.151)
C5': (58.870,121.681,113.465)
P: (57.207,123.669,113.869)
C4': (59.590,121.257,112.218)
C2': (59.840,122.896,110.513)
O2': (60.724,123.381,109.527)
N1: (57.890,121.893,109.139)
O4: (54.633,121.958,106.800)
O2: (59.101,121.420,107.247)
C6: (56.678,122.252,109.680)
C5: (55.557,122.310,108.959)
O3': (61.599,121.430,111.063)
Image (generated by PyMOL):
PyMOL image
show in jmol