Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2019:A2448
Extra
PDB:
ATOM 1 O3' G A2018 52.624 112.741 108.030 1.00 39.66 O
ATOM 2 P G A2019 52.953 114.300 108.236 1.00 39.00 P
ATOM 3 OP1 G A2019 53.728 114.730 107.055 1.00 37.70 O
ATOM 4 OP2 G A2019 53.511 114.489 109.590 1.00 39.79 O
ATOM 5 O5' G A2019 51.548 115.040 108.220 1.00 38.38 O
ATOM 6 C5' G A2019 51.027 115.607 107.014 1.00 37.45 C
ATOM 7 C4' G A2019 50.938 117.106 107.135 1.00 36.63 C
ATOM 8 O4' G A2019 52.171 117.651 107.682 1.00 36.67 O
ATOM 9 C3' G A2019 50.748 117.747 105.773 1.00 35.08 C
ATOM 10 O3' G A2019 49.970 118.924 105.935 1.00 32.57 O
ATOM 11 C2' G A2019 52.170 118.128 105.403 1.00 36.22 C
ATOM 12 O2' G A2019 52.293 119.128 104.428 1.00 38.45 O
ATOM 13 C1' G A2019 52.715 118.565 106.762 1.00 36.22 C
ATOM 14 N9 G A2019 54.169 118.561 106.864 1.00 35.36 N
ATOM 15 C8 G A2019 55.049 118.278 105.849 1.00 36.58 C
ATOM 16 N7 G A2019 56.296 118.409 106.199 1.00 36.51 N
ATOM 17 C5 G A2019 56.239 118.796 107.532 1.00 35.64 C
ATOM 18 C6 G A2019 57.276 119.090 108.437 1.00 34.44 C
ATOM 19 O6 G A2019 58.487 119.099 108.224 1.00 36.89 O
ATOM 20 N1 G A2019 56.787 119.411 109.700 1.00 32.55 N
ATOM 21 C2 G A2019 55.468 119.443 110.045 1.00 32.43 C
ATOM 22 N2 G A2019 55.204 119.752 111.330 1.00 30.89 N
ATOM 23 N3 G A2019 54.479 119.186 109.198 1.00 33.58 N
ATOM 24 C4 G A2019 54.936 118.874 107.966 1.00 34.58 C
ATOM 25 P A A2020 48.419 118.906 105.583 1.00 31.28 P
ATOM 26 OP1 A A2020 47.679 118.463 106.786 1.00 29.69 O
ATOM 27 OP2 A A2020 48.276 118.182 104.329 1.00 31.53 O
ATOM 28 O5' A A2020 48.087 120.421 105.258 1.00 30.92 O
TER
ATOM 1 O3' G B2447 57.001 123.084 115.159 1.00 29.24 O
ATOM 2 P U B2448 57.295 123.870 113.796 1.00 29.83 P
ATOM 3 OP1 U B2448 57.470 125.290 114.103 1.00 31.08 O
ATOM 4 OP2 U B2448 56.319 123.478 112.776 1.00 32.04 O
ATOM 5 O5' U B2448 58.702 123.306 113.331 1.00 29.57 O
ATOM 6 C5' U B2448 59.007 121.916 113.401 1.00 30.05 C
ATOM 7 C4' U B2448 59.703 121.491 112.142 1.00 31.94 C
ATOM 8 O4' U B2448 58.732 121.269 111.089 1.00 33.01 O
ATOM 9 C3' U B2448 60.691 122.506 111.578 1.00 32.82 C
ATOM 10 O3' U B2448 61.698 121.729 110.959 1.00 33.53 O
ATOM 11 C2' U B2448 59.860 123.192 110.494 1.00 34.20 C
ATOM 12 O2' U B2448 60.632 123.856 109.518 1.00 32.70 O
ATOM 13 C1' U B2448 59.133 121.973 109.933 1.00 35.04 C
ATOM 14 N1 U B2448 57.961 122.137 109.064 1.00 38.22 N
ATOM 15 C2 U B2448 58.110 121.892 107.705 1.00 38.16 C
ATOM 16 O2 U B2448 59.177 121.610 107.184 1.00 37.29 O
ATOM 17 N3 U B2448 56.953 121.987 106.974 1.00 39.91 N
ATOM 18 C4 U B2448 55.689 122.300 107.445 1.00 41.22 C
ATOM 19 O4 U B2448 54.737 122.302 106.666 1.00 42.60 O
ATOM 20 C5 U B2448 55.626 122.573 108.851 1.00 41.07 C
ATOM 21 C6 U B2448 56.738 122.488 109.591 1.00 39.81 C
ATOM 22 P C B2449 63.236 122.145 111.069 1.00 34.47 P
ATOM 23 OP1 C B2449 63.376 123.401 111.854 1.00 35.51 O
ATOM 24 OP2 C B2449 63.759 122.094 109.685 1.00 33.03 O
ATOM 25 O5' C B2449 63.885 120.946 111.893 1.00 35.16 O
TER
ATOM 2 P G A2019 52.953 114.300 108.236 1.00 39.00 P
ATOM 3 OP1 G A2019 53.728 114.730 107.055 1.00 37.70 O
ATOM 4 OP2 G A2019 53.511 114.489 109.590 1.00 39.79 O
ATOM 5 O5' G A2019 51.548 115.040 108.220 1.00 38.38 O
ATOM 6 C5' G A2019 51.027 115.607 107.014 1.00 37.45 C
ATOM 7 C4' G A2019 50.938 117.106 107.135 1.00 36.63 C
ATOM 8 O4' G A2019 52.171 117.651 107.682 1.00 36.67 O
ATOM 9 C3' G A2019 50.748 117.747 105.773 1.00 35.08 C
ATOM 10 O3' G A2019 49.970 118.924 105.935 1.00 32.57 O
ATOM 11 C2' G A2019 52.170 118.128 105.403 1.00 36.22 C
ATOM 12 O2' G A2019 52.293 119.128 104.428 1.00 38.45 O
ATOM 13 C1' G A2019 52.715 118.565 106.762 1.00 36.22 C
ATOM 14 N9 G A2019 54.169 118.561 106.864 1.00 35.36 N
ATOM 15 C8 G A2019 55.049 118.278 105.849 1.00 36.58 C
ATOM 16 N7 G A2019 56.296 118.409 106.199 1.00 36.51 N
ATOM 17 C5 G A2019 56.239 118.796 107.532 1.00 35.64 C
ATOM 18 C6 G A2019 57.276 119.090 108.437 1.00 34.44 C
ATOM 19 O6 G A2019 58.487 119.099 108.224 1.00 36.89 O
ATOM 20 N1 G A2019 56.787 119.411 109.700 1.00 32.55 N
ATOM 21 C2 G A2019 55.468 119.443 110.045 1.00 32.43 C
ATOM 22 N2 G A2019 55.204 119.752 111.330 1.00 30.89 N
ATOM 23 N3 G A2019 54.479 119.186 109.198 1.00 33.58 N
ATOM 24 C4 G A2019 54.936 118.874 107.966 1.00 34.58 C
ATOM 25 P A A2020 48.419 118.906 105.583 1.00 31.28 P
ATOM 26 OP1 A A2020 47.679 118.463 106.786 1.00 29.69 O
ATOM 27 OP2 A A2020 48.276 118.182 104.329 1.00 31.53 O
ATOM 28 O5' A A2020 48.087 120.421 105.258 1.00 30.92 O
TER
ATOM 1 O3' G B2447 57.001 123.084 115.159 1.00 29.24 O
ATOM 2 P U B2448 57.295 123.870 113.796 1.00 29.83 P
ATOM 3 OP1 U B2448 57.470 125.290 114.103 1.00 31.08 O
ATOM 4 OP2 U B2448 56.319 123.478 112.776 1.00 32.04 O
ATOM 5 O5' U B2448 58.702 123.306 113.331 1.00 29.57 O
ATOM 6 C5' U B2448 59.007 121.916 113.401 1.00 30.05 C
ATOM 7 C4' U B2448 59.703 121.491 112.142 1.00 31.94 C
ATOM 8 O4' U B2448 58.732 121.269 111.089 1.00 33.01 O
ATOM 9 C3' U B2448 60.691 122.506 111.578 1.00 32.82 C
ATOM 10 O3' U B2448 61.698 121.729 110.959 1.00 33.53 O
ATOM 11 C2' U B2448 59.860 123.192 110.494 1.00 34.20 C
ATOM 12 O2' U B2448 60.632 123.856 109.518 1.00 32.70 O
ATOM 13 C1' U B2448 59.133 121.973 109.933 1.00 35.04 C
ATOM 14 N1 U B2448 57.961 122.137 109.064 1.00 38.22 N
ATOM 15 C2 U B2448 58.110 121.892 107.705 1.00 38.16 C
ATOM 16 O2 U B2448 59.177 121.610 107.184 1.00 37.29 O
ATOM 17 N3 U B2448 56.953 121.987 106.974 1.00 39.91 N
ATOM 18 C4 U B2448 55.689 122.300 107.445 1.00 41.22 C
ATOM 19 O4 U B2448 54.737 122.302 106.666 1.00 42.60 O
ATOM 20 C5 U B2448 55.626 122.573 108.851 1.00 41.07 C
ATOM 21 C6 U B2448 56.738 122.488 109.591 1.00 39.81 C
ATOM 22 P C B2449 63.236 122.145 111.069 1.00 34.47 P
ATOM 23 OP1 C B2449 63.376 123.401 111.854 1.00 35.51 O
ATOM 24 OP2 C B2449 63.759 122.094 109.685 1.00 33.03 O
ATOM 25 O5' C B2449 63.885 120.946 111.893 1.00 35.16 O
TER
Atoms:
OP1: (53.728,114.730,107.055)
OP2: (53.511,114.489,109.590)
C3': (50.748,117.747,105.773)
C1': (52.715,118.565,106.762)
C5': (51.027,115.607,107.014)
O6: (58.487,119.099,108.224)
O4': (52.171,117.651,107.682)
C8: (55.049,118.278,105.849)
C2: (55.468,119.443,110.045)
C6: (57.276,119.090,108.437)
C5: (56.239,118.796,107.532)
C4: (54.936,118.874,107.966)
P: (52.953,114.300,108.236)
C4': (50.938,117.106,107.135)
C2': (52.170,118.128,105.403)
O2': (52.293,119.128,104.428)
N1: (56.787,119.411,109.700)
N2: (55.204,119.752,111.330)
N3: (54.479,119.186,109.198)
N7: (56.296,118.409,106.199)
N9: (54.169,118.561,106.864)
O5': (51.548,115.040,108.220)
O3': (49.970,118.924,105.935)
OP2: (53.511,114.489,109.590)
C3': (50.748,117.747,105.773)
C1': (52.715,118.565,106.762)
C5': (51.027,115.607,107.014)
O6: (58.487,119.099,108.224)
O4': (52.171,117.651,107.682)
C8: (55.049,118.278,105.849)
C2: (55.468,119.443,110.045)
C6: (57.276,119.090,108.437)
C5: (56.239,118.796,107.532)
C4: (54.936,118.874,107.966)
P: (52.953,114.300,108.236)
C4': (50.938,117.106,107.135)
C2': (52.170,118.128,105.403)
O2': (52.293,119.128,104.428)
N1: (56.787,119.411,109.700)
N2: (55.204,119.752,111.330)
N3: (54.479,119.186,109.198)
N7: (56.296,118.409,106.199)
N9: (54.169,118.561,106.864)
O5': (51.548,115.040,108.220)
O3': (49.970,118.924,105.935)
C4: (55.689,122.300,107.445)
N3: (56.953,121.987,106.974)
OP1: (57.470,125.290,114.103)
OP2: (56.319,123.478,112.776)
C2: (58.110,121.892,107.705)
C1': (59.133,121.973,109.933)
C3': (60.691,122.506,111.578)
O5': (58.702,123.306,113.331)
O4': (58.732,121.269,111.089)
C5': (59.007,121.916,113.401)
P: (57.295,123.870,113.796)
C4': (59.703,121.491,112.142)
C2': (59.860,123.192,110.494)
O2': (60.632,123.856,109.518)
N1: (57.961,122.137,109.064)
O4: (54.737,122.302,106.666)
O2: (59.177,121.610,107.184)
C6: (56.738,122.488,109.591)
C5: (55.626,122.573,108.851)
O3': (61.698,121.729,110.959)
N3: (56.953,121.987,106.974)
OP1: (57.470,125.290,114.103)
OP2: (56.319,123.478,112.776)
C2: (58.110,121.892,107.705)
C1': (59.133,121.973,109.933)
C3': (60.691,122.506,111.578)
O5': (58.702,123.306,113.331)
O4': (58.732,121.269,111.089)
C5': (59.007,121.916,113.401)
P: (57.295,123.870,113.796)
C4': (59.703,121.491,112.142)
C2': (59.860,123.192,110.494)
O2': (60.632,123.856,109.518)
N1: (57.961,122.137,109.064)
O4: (54.737,122.302,106.666)
O2: (59.177,121.610,107.184)
C6: (56.738,122.488,109.591)
C5: (55.626,122.573,108.851)
O3': (61.698,121.729,110.959)
Image (generated by PyMOL):