Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2103:A2088
Extra
PDB:
ATOM 1 O3' G A2102 124.268 115.670 44.363 1.00 87.93 O
ATOM 2 P G A2103 124.362 114.167 43.789 1.00 89.03 P
ATOM 3 OP1 G A2103 123.850 113.233 44.833 1.00 88.55 O
ATOM 4 OP2 G A2103 125.726 113.965 43.231 1.00 89.06 O
ATOM 5 O5' G A2103 123.306 114.123 42.593 1.00 86.84 O
ATOM 6 C5' G A2103 121.902 114.089 42.873 1.00 83.81 C
ATOM 7 C4' G A2103 121.118 113.747 41.636 1.00 81.97 C
ATOM 8 O4' G A2103 121.174 114.817 40.662 1.00 81.71 O
ATOM 9 C3' G A2103 121.583 112.520 40.888 1.00 80.71 C
ATOM 10 O3' G A2103 121.055 111.354 41.497 1.00 79.90 O
ATOM 11 C2' G A2103 120.982 112.747 39.512 1.00 81.78 C
ATOM 12 O2' G A2103 119.604 112.438 39.476 1.00 82.06 O
ATOM 13 C1' G A2103 121.144 114.263 39.360 1.00 82.11 C
ATOM 14 N9 G A2103 122.372 114.654 38.675 1.00 82.83 N
ATOM 15 C8 G A2103 123.621 114.775 39.235 1.00 83.49 C
ATOM 16 N7 G A2103 124.527 115.172 38.386 1.00 84.50 N
ATOM 17 C5 G A2103 123.838 115.316 37.188 1.00 84.10 C
ATOM 18 C6 G A2103 124.300 115.726 35.915 1.00 84.47 C
ATOM 19 O6 G A2103 125.443 116.062 35.592 1.00 85.82 O
ATOM 20 N1 G A2103 123.278 115.726 34.970 1.00 83.11 N
ATOM 21 C2 G A2103 121.978 115.380 35.222 1.00 81.88 C
ATOM 22 N2 G A2103 121.150 115.448 34.181 1.00 81.45 N
ATOM 23 N3 G A2103 121.528 114.998 36.410 1.00 82.15 N
ATOM 24 C4 G A2103 122.509 114.991 37.343 1.00 83.08 C
ATOM 25 P A A2104 121.818 109.957 41.324 1.00 79.97 P
ATOM 26 OP1 A A2104 121.320 108.993 42.346 1.00 79.25 O
ATOM 27 OP2 A A2104 123.265 110.272 41.252 1.00 81.89 O
ATOM 28 O5' A A2104 121.386 109.443 39.884 1.00 78.28 O
TER
ATOM 1 O3' C B2087 129.932 113.033 33.392 1.00 94.60 O
ATOM 2 P U B2088 129.200 114.478 33.343 1.00 93.22 P
ATOM 3 OP1 U B2088 130.029 115.382 32.504 1.00 92.37 O
ATOM 4 OP2 U B2088 128.818 114.904 34.718 1.00 92.91 O
ATOM 5 O5' U B2088 127.881 114.217 32.500 1.00 90.91 O
ATOM 6 C5' U B2088 127.961 113.756 31.149 1.00 88.76 C
ATOM 7 C4' U B2088 126.581 113.673 30.556 1.00 87.53 C
ATOM 8 O4' U B2088 125.775 112.745 31.334 1.00 87.30 O
ATOM 9 C3' U B2088 125.811 114.989 30.558 1.00 86.73 C
ATOM 10 O3' U B2088 124.923 114.974 29.453 1.00 86.46 O
ATOM 11 C2' U B2088 125.006 114.909 31.848 1.00 86.27 C
ATOM 12 O2' U B2088 123.835 115.697 31.818 1.00 84.27 O
ATOM 13 C1' U B2088 124.647 113.426 31.860 1.00 87.01 C
ATOM 14 N1 U B2088 124.351 112.888 33.194 1.00 87.29 N
ATOM 15 C2 U B2088 123.064 112.453 33.437 1.00 86.92 C
ATOM 16 O2 U B2088 122.169 112.506 32.604 1.00 86.74 O
ATOM 17 N3 U B2088 122.858 111.950 34.692 1.00 87.12 N
ATOM 18 C4 U B2088 123.784 111.841 35.710 1.00 88.03 C
ATOM 19 O4 U B2088 123.445 111.348 36.787 1.00 88.58 O
ATOM 20 C5 U B2088 125.092 112.321 35.383 1.00 87.99 C
ATOM 21 C6 U B2088 125.325 112.815 34.168 1.00 87.69 C
ATOM 22 P C B2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 23 OP1 C B2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 24 OP2 C B2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 25 O5' C B2089 122.921 116.358 28.920 1.00 86.03 O
TER
ATOM 2 P G A2103 124.362 114.167 43.789 1.00 89.03 P
ATOM 3 OP1 G A2103 123.850 113.233 44.833 1.00 88.55 O
ATOM 4 OP2 G A2103 125.726 113.965 43.231 1.00 89.06 O
ATOM 5 O5' G A2103 123.306 114.123 42.593 1.00 86.84 O
ATOM 6 C5' G A2103 121.902 114.089 42.873 1.00 83.81 C
ATOM 7 C4' G A2103 121.118 113.747 41.636 1.00 81.97 C
ATOM 8 O4' G A2103 121.174 114.817 40.662 1.00 81.71 O
ATOM 9 C3' G A2103 121.583 112.520 40.888 1.00 80.71 C
ATOM 10 O3' G A2103 121.055 111.354 41.497 1.00 79.90 O
ATOM 11 C2' G A2103 120.982 112.747 39.512 1.00 81.78 C
ATOM 12 O2' G A2103 119.604 112.438 39.476 1.00 82.06 O
ATOM 13 C1' G A2103 121.144 114.263 39.360 1.00 82.11 C
ATOM 14 N9 G A2103 122.372 114.654 38.675 1.00 82.83 N
ATOM 15 C8 G A2103 123.621 114.775 39.235 1.00 83.49 C
ATOM 16 N7 G A2103 124.527 115.172 38.386 1.00 84.50 N
ATOM 17 C5 G A2103 123.838 115.316 37.188 1.00 84.10 C
ATOM 18 C6 G A2103 124.300 115.726 35.915 1.00 84.47 C
ATOM 19 O6 G A2103 125.443 116.062 35.592 1.00 85.82 O
ATOM 20 N1 G A2103 123.278 115.726 34.970 1.00 83.11 N
ATOM 21 C2 G A2103 121.978 115.380 35.222 1.00 81.88 C
ATOM 22 N2 G A2103 121.150 115.448 34.181 1.00 81.45 N
ATOM 23 N3 G A2103 121.528 114.998 36.410 1.00 82.15 N
ATOM 24 C4 G A2103 122.509 114.991 37.343 1.00 83.08 C
ATOM 25 P A A2104 121.818 109.957 41.324 1.00 79.97 P
ATOM 26 OP1 A A2104 121.320 108.993 42.346 1.00 79.25 O
ATOM 27 OP2 A A2104 123.265 110.272 41.252 1.00 81.89 O
ATOM 28 O5' A A2104 121.386 109.443 39.884 1.00 78.28 O
TER
ATOM 1 O3' C B2087 129.932 113.033 33.392 1.00 94.60 O
ATOM 2 P U B2088 129.200 114.478 33.343 1.00 93.22 P
ATOM 3 OP1 U B2088 130.029 115.382 32.504 1.00 92.37 O
ATOM 4 OP2 U B2088 128.818 114.904 34.718 1.00 92.91 O
ATOM 5 O5' U B2088 127.881 114.217 32.500 1.00 90.91 O
ATOM 6 C5' U B2088 127.961 113.756 31.149 1.00 88.76 C
ATOM 7 C4' U B2088 126.581 113.673 30.556 1.00 87.53 C
ATOM 8 O4' U B2088 125.775 112.745 31.334 1.00 87.30 O
ATOM 9 C3' U B2088 125.811 114.989 30.558 1.00 86.73 C
ATOM 10 O3' U B2088 124.923 114.974 29.453 1.00 86.46 O
ATOM 11 C2' U B2088 125.006 114.909 31.848 1.00 86.27 C
ATOM 12 O2' U B2088 123.835 115.697 31.818 1.00 84.27 O
ATOM 13 C1' U B2088 124.647 113.426 31.860 1.00 87.01 C
ATOM 14 N1 U B2088 124.351 112.888 33.194 1.00 87.29 N
ATOM 15 C2 U B2088 123.064 112.453 33.437 1.00 86.92 C
ATOM 16 O2 U B2088 122.169 112.506 32.604 1.00 86.74 O
ATOM 17 N3 U B2088 122.858 111.950 34.692 1.00 87.12 N
ATOM 18 C4 U B2088 123.784 111.841 35.710 1.00 88.03 C
ATOM 19 O4 U B2088 123.445 111.348 36.787 1.00 88.58 O
ATOM 20 C5 U B2088 125.092 112.321 35.383 1.00 87.99 C
ATOM 21 C6 U B2088 125.325 112.815 34.168 1.00 87.69 C
ATOM 22 P C B2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 23 OP1 C B2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 24 OP2 C B2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 25 O5' C B2089 122.921 116.358 28.920 1.00 86.03 O
TER
Atoms:
OP1: (123.850,113.233,44.833)
OP2: (125.726,113.965,43.231)
C3': (121.583,112.520,40.888)
C1': (121.144,114.263,39.360)
C5': (121.902,114.089,42.873)
O6: (125.443,116.062,35.592)
O4': (121.174,114.817,40.662)
C8: (123.621,114.775,39.235)
C2: (121.978,115.380,35.222)
C6: (124.300,115.726,35.915)
C5: (123.838,115.316,37.188)
C4: (122.509,114.991,37.343)
P: (124.362,114.167,43.789)
C4': (121.118,113.747,41.636)
C2': (120.982,112.747,39.512)
O2': (119.604,112.438,39.476)
N1: (123.278,115.726,34.970)
N2: (121.150,115.448,34.181)
N3: (121.528,114.998,36.410)
N7: (124.527,115.172,38.386)
N9: (122.372,114.654,38.675)
O5': (123.306,114.123,42.593)
O3': (121.055,111.354,41.497)
OP2: (125.726,113.965,43.231)
C3': (121.583,112.520,40.888)
C1': (121.144,114.263,39.360)
C5': (121.902,114.089,42.873)
O6: (125.443,116.062,35.592)
O4': (121.174,114.817,40.662)
C8: (123.621,114.775,39.235)
C2: (121.978,115.380,35.222)
C6: (124.300,115.726,35.915)
C5: (123.838,115.316,37.188)
C4: (122.509,114.991,37.343)
P: (124.362,114.167,43.789)
C4': (121.118,113.747,41.636)
C2': (120.982,112.747,39.512)
O2': (119.604,112.438,39.476)
N1: (123.278,115.726,34.970)
N2: (121.150,115.448,34.181)
N3: (121.528,114.998,36.410)
N7: (124.527,115.172,38.386)
N9: (122.372,114.654,38.675)
O5': (123.306,114.123,42.593)
O3': (121.055,111.354,41.497)
C4: (123.784,111.841,35.710)
N3: (122.858,111.950,34.692)
OP1: (130.029,115.382,32.504)
OP2: (128.818,114.904,34.718)
C2: (123.064,112.453,33.437)
C1': (124.647,113.426,31.860)
C3': (125.811,114.989,30.558)
O5': (127.881,114.217,32.500)
O4': (125.775,112.745,31.334)
C5': (127.961,113.756,31.149)
P: (129.200,114.478,33.343)
C4': (126.581,113.673,30.556)
C2': (125.006,114.909,31.848)
O2': (123.835,115.697,31.818)
N1: (124.351,112.888,33.194)
O4: (123.445,111.348,36.787)
O2: (122.169,112.506,32.604)
C6: (125.325,112.815,34.168)
C5: (125.092,112.321,35.383)
O3': (124.923,114.974,29.453)
N3: (122.858,111.950,34.692)
OP1: (130.029,115.382,32.504)
OP2: (128.818,114.904,34.718)
C2: (123.064,112.453,33.437)
C1': (124.647,113.426,31.860)
C3': (125.811,114.989,30.558)
O5': (127.881,114.217,32.500)
O4': (125.775,112.745,31.334)
C5': (127.961,113.756,31.149)
P: (129.200,114.478,33.343)
C4': (126.581,113.673,30.556)
C2': (125.006,114.909,31.848)
O2': (123.835,115.697,31.818)
N1: (124.351,112.888,33.194)
O4: (123.445,111.348,36.787)
O2: (122.169,112.506,32.604)
C6: (125.325,112.815,34.168)
C5: (125.092,112.321,35.383)
O3': (124.923,114.974,29.453)
Image (generated by PyMOL):