Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A2103:A2088
Extra
PDB:
ATOM 1 O3' G A2102 123.993 115.415 43.854 1.00 69.91 O
ATOM 2 P G A2103 124.033 113.904 43.307 1.00 70.27 P
ATOM 3 OP1 G A2103 123.515 113.026 44.391 1.00 69.79 O
ATOM 4 OP2 G A2103 125.377 113.647 42.734 1.00 70.50 O
ATOM 5 O5' G A2103 122.977 113.874 42.111 1.00 68.32 O
ATOM 6 C5' G A2103 121.568 113.787 42.377 1.00 65.71 C
ATOM 7 C4' G A2103 120.808 113.445 41.122 1.00 63.66 C
ATOM 8 O4' G A2103 120.884 114.522 40.156 1.00 63.67 O
ATOM 9 C3' G A2103 121.298 112.234 40.361 1.00 62.90 C
ATOM 10 O3' G A2103 120.820 111.049 40.974 1.00 61.96 O
ATOM 11 C2' G A2103 120.688 112.464 38.986 1.00 63.56 C
ATOM 12 O2' G A2103 119.312 112.148 38.949 1.00 62.87 O
ATOM 13 C1' G A2103 120.847 113.979 38.841 1.00 64.30 C
ATOM 14 N9 G A2103 122.073 114.365 38.147 1.00 66.13 N
ATOM 15 C8 G A2103 123.326 114.477 38.703 1.00 67.55 C
ATOM 16 N7 G A2103 124.230 114.877 37.853 1.00 68.59 N
ATOM 17 C5 G A2103 123.538 115.033 36.659 1.00 67.81 C
ATOM 18 C6 G A2103 123.994 115.459 35.391 1.00 68.26 C
ATOM 19 O6 G A2103 125.134 115.808 35.064 1.00 69.78 O
ATOM 20 N1 G A2103 122.970 115.465 34.452 1.00 67.38 N
ATOM 21 C2 G A2103 121.671 115.111 34.703 1.00 66.16 C
ATOM 22 N2 G A2103 120.833 115.179 33.657 1.00 65.67 N
ATOM 23 N3 G A2103 121.226 114.719 35.888 1.00 66.35 N
ATOM 24 C4 G A2103 122.208 114.706 36.815 1.00 66.65 C
ATOM 25 P A A2104 121.614 109.673 40.768 1.00 62.70 P
ATOM 26 OP1 A A2104 121.122 108.704 41.789 1.00 61.55 O
ATOM 27 OP2 A A2104 123.061 110.007 40.708 1.00 63.67 O
ATOM 28 O5' A A2104 121.161 109.185 39.321 1.00 60.60 O
TER
ATOM 1 O3' C B2087 129.659 112.750 32.871 1.00 77.24 O
ATOM 2 P U B2088 128.951 114.193 32.799 1.00 76.05 P
ATOM 3 OP1 U B2088 129.789 115.070 31.940 1.00 75.77 O
ATOM 4 OP2 U B2088 128.606 114.635 34.181 1.00 75.22 O
ATOM 5 O5' U B2088 127.615 113.924 31.982 1.00 73.64 O
ATOM 6 C5' U B2088 127.668 113.462 30.627 1.00 71.07 C
ATOM 7 C4' U B2088 126.281 113.422 30.035 1.00 69.65 C
ATOM 8 O4' U B2088 125.444 112.519 30.811 1.00 69.69 O
ATOM 9 C3' U B2088 125.541 114.751 30.023 1.00 68.00 C
ATOM 10 O3' U B2088 124.662 114.717 28.911 1.00 66.10 O
ATOM 11 C2' U B2088 124.756 114.699 31.327 1.00 67.75 C
ATOM 12 O2' U B2088 123.633 115.548 31.347 1.00 66.83 O
ATOM 13 C1' U B2088 124.342 113.231 31.347 1.00 69.44 C
ATOM 14 N1 U B2088 124.042 112.696 32.684 1.00 70.54 N
ATOM 15 C2 U B2088 122.760 112.225 32.925 1.00 70.47 C
ATOM 16 O2 U B2088 121.869 112.241 32.088 1.00 69.25 O
ATOM 17 N3 U B2088 122.559 111.733 34.189 1.00 70.80 N
ATOM 18 C4 U B2088 123.479 111.666 35.214 1.00 71.71 C
ATOM 19 O4 U B2088 123.141 111.196 36.303 1.00 72.71 O
ATOM 20 C5 U B2088 124.773 112.174 34.888 1.00 71.21 C
ATOM 21 C6 U B2088 125.004 112.658 33.668 1.00 71.19 C
ATOM 22 P C B2089 124.244 116.076 28.179 1.00 65.14 P
ATOM 23 OP1 C B2089 124.571 115.894 26.744 1.00 66.35 O
ATOM 24 OP2 C B2089 124.783 117.245 28.921 1.00 64.92 O
ATOM 25 O5' C B2089 122.668 116.077 28.344 1.00 64.99 O
TER
ATOM 2 P G A2103 124.033 113.904 43.307 1.00 70.27 P
ATOM 3 OP1 G A2103 123.515 113.026 44.391 1.00 69.79 O
ATOM 4 OP2 G A2103 125.377 113.647 42.734 1.00 70.50 O
ATOM 5 O5' G A2103 122.977 113.874 42.111 1.00 68.32 O
ATOM 6 C5' G A2103 121.568 113.787 42.377 1.00 65.71 C
ATOM 7 C4' G A2103 120.808 113.445 41.122 1.00 63.66 C
ATOM 8 O4' G A2103 120.884 114.522 40.156 1.00 63.67 O
ATOM 9 C3' G A2103 121.298 112.234 40.361 1.00 62.90 C
ATOM 10 O3' G A2103 120.820 111.049 40.974 1.00 61.96 O
ATOM 11 C2' G A2103 120.688 112.464 38.986 1.00 63.56 C
ATOM 12 O2' G A2103 119.312 112.148 38.949 1.00 62.87 O
ATOM 13 C1' G A2103 120.847 113.979 38.841 1.00 64.30 C
ATOM 14 N9 G A2103 122.073 114.365 38.147 1.00 66.13 N
ATOM 15 C8 G A2103 123.326 114.477 38.703 1.00 67.55 C
ATOM 16 N7 G A2103 124.230 114.877 37.853 1.00 68.59 N
ATOM 17 C5 G A2103 123.538 115.033 36.659 1.00 67.81 C
ATOM 18 C6 G A2103 123.994 115.459 35.391 1.00 68.26 C
ATOM 19 O6 G A2103 125.134 115.808 35.064 1.00 69.78 O
ATOM 20 N1 G A2103 122.970 115.465 34.452 1.00 67.38 N
ATOM 21 C2 G A2103 121.671 115.111 34.703 1.00 66.16 C
ATOM 22 N2 G A2103 120.833 115.179 33.657 1.00 65.67 N
ATOM 23 N3 G A2103 121.226 114.719 35.888 1.00 66.35 N
ATOM 24 C4 G A2103 122.208 114.706 36.815 1.00 66.65 C
ATOM 25 P A A2104 121.614 109.673 40.768 1.00 62.70 P
ATOM 26 OP1 A A2104 121.122 108.704 41.789 1.00 61.55 O
ATOM 27 OP2 A A2104 123.061 110.007 40.708 1.00 63.67 O
ATOM 28 O5' A A2104 121.161 109.185 39.321 1.00 60.60 O
TER
ATOM 1 O3' C B2087 129.659 112.750 32.871 1.00 77.24 O
ATOM 2 P U B2088 128.951 114.193 32.799 1.00 76.05 P
ATOM 3 OP1 U B2088 129.789 115.070 31.940 1.00 75.77 O
ATOM 4 OP2 U B2088 128.606 114.635 34.181 1.00 75.22 O
ATOM 5 O5' U B2088 127.615 113.924 31.982 1.00 73.64 O
ATOM 6 C5' U B2088 127.668 113.462 30.627 1.00 71.07 C
ATOM 7 C4' U B2088 126.281 113.422 30.035 1.00 69.65 C
ATOM 8 O4' U B2088 125.444 112.519 30.811 1.00 69.69 O
ATOM 9 C3' U B2088 125.541 114.751 30.023 1.00 68.00 C
ATOM 10 O3' U B2088 124.662 114.717 28.911 1.00 66.10 O
ATOM 11 C2' U B2088 124.756 114.699 31.327 1.00 67.75 C
ATOM 12 O2' U B2088 123.633 115.548 31.347 1.00 66.83 O
ATOM 13 C1' U B2088 124.342 113.231 31.347 1.00 69.44 C
ATOM 14 N1 U B2088 124.042 112.696 32.684 1.00 70.54 N
ATOM 15 C2 U B2088 122.760 112.225 32.925 1.00 70.47 C
ATOM 16 O2 U B2088 121.869 112.241 32.088 1.00 69.25 O
ATOM 17 N3 U B2088 122.559 111.733 34.189 1.00 70.80 N
ATOM 18 C4 U B2088 123.479 111.666 35.214 1.00 71.71 C
ATOM 19 O4 U B2088 123.141 111.196 36.303 1.00 72.71 O
ATOM 20 C5 U B2088 124.773 112.174 34.888 1.00 71.21 C
ATOM 21 C6 U B2088 125.004 112.658 33.668 1.00 71.19 C
ATOM 22 P C B2089 124.244 116.076 28.179 1.00 65.14 P
ATOM 23 OP1 C B2089 124.571 115.894 26.744 1.00 66.35 O
ATOM 24 OP2 C B2089 124.783 117.245 28.921 1.00 64.92 O
ATOM 25 O5' C B2089 122.668 116.077 28.344 1.00 64.99 O
TER
Atoms:
OP1: (123.515,113.026,44.391)
OP2: (125.377,113.647,42.734)
C3': (121.298,112.234,40.361)
C1': (120.847,113.979,38.841)
C5': (121.568,113.787,42.377)
O6: (125.134,115.808,35.064)
O4': (120.884,114.522,40.156)
C8: (123.326,114.477,38.703)
C2: (121.671,115.111,34.703)
C6: (123.994,115.459,35.391)
C5: (123.538,115.033,36.659)
C4: (122.208,114.706,36.815)
P: (124.033,113.904,43.307)
C4': (120.808,113.445,41.122)
C2': (120.688,112.464,38.986)
O2': (119.312,112.148,38.949)
N1: (122.970,115.465,34.452)
N2: (120.833,115.179,33.657)
N3: (121.226,114.719,35.888)
N7: (124.230,114.877,37.853)
N9: (122.073,114.365,38.147)
O5': (122.977,113.874,42.111)
O3': (120.820,111.049,40.974)
OP2: (125.377,113.647,42.734)
C3': (121.298,112.234,40.361)
C1': (120.847,113.979,38.841)
C5': (121.568,113.787,42.377)
O6: (125.134,115.808,35.064)
O4': (120.884,114.522,40.156)
C8: (123.326,114.477,38.703)
C2: (121.671,115.111,34.703)
C6: (123.994,115.459,35.391)
C5: (123.538,115.033,36.659)
C4: (122.208,114.706,36.815)
P: (124.033,113.904,43.307)
C4': (120.808,113.445,41.122)
C2': (120.688,112.464,38.986)
O2': (119.312,112.148,38.949)
N1: (122.970,115.465,34.452)
N2: (120.833,115.179,33.657)
N3: (121.226,114.719,35.888)
N7: (124.230,114.877,37.853)
N9: (122.073,114.365,38.147)
O5': (122.977,113.874,42.111)
O3': (120.820,111.049,40.974)
C4: (123.479,111.666,35.214)
N3: (122.559,111.733,34.189)
OP1: (129.789,115.070,31.940)
OP2: (128.606,114.635,34.181)
C2: (122.760,112.225,32.925)
C1': (124.342,113.231,31.347)
C3': (125.541,114.751,30.023)
O5': (127.615,113.924,31.982)
O4': (125.444,112.519,30.811)
C5': (127.668,113.462,30.627)
P: (128.951,114.193,32.799)
C4': (126.281,113.422,30.035)
C2': (124.756,114.699,31.327)
O2': (123.633,115.548,31.347)
N1: (124.042,112.696,32.684)
O4: (123.141,111.196,36.303)
O2: (121.869,112.241,32.088)
C6: (125.004,112.658,33.668)
C5: (124.773,112.174,34.888)
O3': (124.662,114.717,28.911)
N3: (122.559,111.733,34.189)
OP1: (129.789,115.070,31.940)
OP2: (128.606,114.635,34.181)
C2: (122.760,112.225,32.925)
C1': (124.342,113.231,31.347)
C3': (125.541,114.751,30.023)
O5': (127.615,113.924,31.982)
O4': (125.444,112.519,30.811)
C5': (127.668,113.462,30.627)
P: (128.951,114.193,32.799)
C4': (126.281,113.422,30.035)
C2': (124.756,114.699,31.327)
O2': (123.633,115.548,31.347)
N1: (124.042,112.696,32.684)
O4: (123.141,111.196,36.303)
O2: (121.869,112.241,32.088)
C6: (125.004,112.658,33.668)
C5: (124.773,112.174,34.888)
O3': (124.662,114.717,28.911)
Image (generated by PyMOL):