ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:02019:02448

Extra

PDB:
ATOM 1 O3' G A2018 52.615 113.078 108.044 1.00 47.20 O
ATOM 2 P G A2019 53.026 114.627 108.068 1.00 49.82 P
ATOM 3 OP1 G A2019 53.631 114.988 106.760 1.00 46.73 O
ATOM 4 OP2 G A2019 53.782 114.872 109.323 1.00 52.20 O
ATOM 5 O5' G A2019 51.645 115.398 108.248 1.00 47.46 O
ATOM 6 C5' G A2019 50.966 115.919 107.117 1.00 41.63 C
ATOM 7 C4' G A2019 51.006 117.422 107.122 1.00 38.50 C
ATOM 8 O4' G A2019 52.269 117.930 107.666 1.00 38.63 O
ATOM 9 C3' G A2019 50.901 117.981 105.711 1.00 37.12 C
ATOM 10 O3' G A2019 50.158 119.181 105.745 1.00 35.96 O
ATOM 11 C2' G A2019 52.364 118.245 105.367 1.00 36.49 C
ATOM 12 O2' G A2019 52.598 119.156 104.318 1.00 36.28 O
ATOM 13 C1' G A2019 52.872 118.775 106.705 1.00 37.98 C
ATOM 14 N9 G A2019 54.324 118.793 106.878 1.00 37.46 N
ATOM 15 C8 G A2019 55.263 118.518 105.918 1.00 37.15 C
ATOM 16 N7 G A2019 56.486 118.703 106.327 1.00 39.26 N
ATOM 17 C5 G A2019 56.352 119.105 107.647 1.00 39.25 C
ATOM 18 C6 G A2019 57.343 119.464 108.605 1.00 39.31 C
ATOM 19 O6 G A2019 58.568 119.522 108.463 1.00 40.13 O
ATOM 20 N1 G A2019 56.779 119.797 109.826 1.00 38.38 N
ATOM 21 C2 G A2019 55.441 119.804 110.098 1.00 40.76 C
ATOM 22 N2 G A2019 55.106 120.166 111.341 1.00 40.27 N
ATOM 23 N3 G A2019 54.499 119.482 109.213 1.00 42.87 N
ATOM 24 C4 G A2019 55.027 119.145 108.013 1.00 39.94 C
ATOM 25 P A A2020 48.590 119.146 105.423 1.00 37.76 P
ATOM 26 OP1 A A2020 47.894 118.612 106.627 1.00 33.10 O
ATOM 27 OP2 A A2020 48.405 118.474 104.114 1.00 39.23 O
ATOM 28 O5' A A2020 48.212 120.680 105.214 1.00 36.81 O
TER

ATOM 1 O3' G B2447 57.012 123.343 115.119 1.00 32.38 O
ATOM 2 P U B2448 57.327 124.075 113.727 1.00 33.40 P
ATOM 3 OP1 U B2448 57.493 125.525 113.949 1.00 34.39 O
ATOM 4 OP2 U B2448 56.306 123.601 112.766 1.00 34.11 O
ATOM 5 O5' U B2448 58.743 123.529 113.254 1.00 31.27 O
ATOM 6 C5' U B2448 59.071 122.140 113.309 1.00 32.44 C
ATOM 7 C4' U B2448 59.823 121.729 112.063 1.00 33.75 C
ATOM 8 O4' U B2448 58.876 121.533 110.982 1.00 36.41 O
ATOM 9 C3' U B2448 60.879 122.696 111.522 1.00 33.24 C
ATOM 10 O3' U B2448 61.906 121.927 110.897 1.00 31.28 O
ATOM 11 C2' U B2448 60.112 123.416 110.418 1.00 34.09 C
ATOM 12 O2' U B2448 60.978 123.942 109.438 1.00 36.83 O
ATOM 13 C1' U B2448 59.314 122.249 109.852 1.00 35.65 C
ATOM 14 N1 U B2448 58.162 122.487 108.974 1.00 37.38 N
ATOM 15 C2 U B2448 58.352 122.349 107.606 1.00 37.02 C
ATOM 16 O2 U B2448 59.439 122.199 107.097 1.00 38.09 O
ATOM 17 N3 U B2448 57.208 122.398 106.856 1.00 38.05 N
ATOM 18 C4 U B2448 55.925 122.610 107.316 1.00 38.86 C
ATOM 19 O4 U B2448 54.990 122.592 106.525 1.00 40.76 O
ATOM 20 C5 U B2448 55.823 122.835 108.723 1.00 39.85 C
ATOM 21 C6 U B2448 56.918 122.773 109.485 1.00 38.76 C
ATOM 22 P C B2449 63.454 122.339 111.063 1.00 31.31 P
ATOM 23 OP1 C B2449 63.563 123.561 111.896 1.00 30.55 O
ATOM 24 OP2 C B2449 64.096 122.309 109.732 1.00 25.77 O
ATOM 25 O5' C B2449 64.057 121.129 111.900 1.00 31.55 O
TER

Atoms:
OP1: (53.631,114.988,106.760)
OP2: (53.782,114.872,109.323)
C3': (50.901,117.981,105.711)
C1': (52.872,118.775,106.705)
C5': (50.966,115.919,107.117)
O6: (58.568,119.522,108.463)
O4': (52.269,117.930,107.666)
C8: (55.263,118.518,105.918)
C2: (55.441,119.804,110.098)
C6: (57.343,119.464,108.605)
C5: (56.352,119.105,107.647)
C4: (55.027,119.145,108.013)
P: (53.026,114.627,108.068)
C4': (51.006,117.422,107.122)
C2': (52.364,118.245,105.367)
O2': (52.598,119.156,104.318)
N1: (56.779,119.797,109.826)
N2: (55.106,120.166,111.341)
N3: (54.499,119.482,109.213)
N7: (56.486,118.703,106.327)
N9: (54.324,118.793,106.878)
O5': (51.645,115.398,108.248)
O3': (50.158,119.181,105.745)
C4: (55.925,122.610,107.316)
N3: (57.208,122.398,106.856)
OP1: (57.493,125.525,113.949)
OP2: (56.306,123.601,112.766)
C2: (58.352,122.349,107.606)
C1': (59.314,122.249,109.852)
C3': (60.879,122.696,111.522)
O5': (58.743,123.529,113.254)
O4': (58.876,121.533,110.982)
C5': (59.071,122.140,113.309)
P: (57.327,124.075,113.727)
C4': (59.823,121.729,112.063)
C2': (60.112,123.416,110.418)
O2': (60.978,123.942,109.438)
N1: (58.162,122.487,108.974)
O4: (54.990,122.592,106.525)
O2: (59.439,122.199,107.097)
C6: (56.918,122.773,109.485)
C5: (55.823,122.835,108.723)
O3': (61.906,121.927,110.897)
Image (generated by PyMOL):
PyMOL image
show in jmol