ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:02103:02088

Extra

PDB:
ATOM 1 O3' G A2102 124.187 116.486 44.245 1.00101.66 O
ATOM 2 P G A2103 124.393 114.999 43.669 1.00102.05 P
ATOM 3 OP1 G A2103 124.012 114.038 44.739 1.00102.02 O
ATOM 4 OP2 G A2103 125.748 114.928 43.068 1.00102.94 O
ATOM 5 O5' G A2103 123.328 114.878 42.487 1.00100.12 O
ATOM 6 C5' G A2103 121.916 114.840 42.765 1.00 97.52 C
ATOM 7 C4' G A2103 121.133 114.528 41.511 1.00 95.16 C
ATOM 8 O4' G A2103 121.244 115.603 40.543 1.00 95.83 O
ATOM 9 C3' G A2103 121.588 113.303 40.746 1.00 92.80 C
ATOM 10 O3' G A2103 121.091 112.130 41.355 1.00 89.76 O
ATOM 11 C2' G A2103 120.995 113.549 39.366 1.00 94.21 C
ATOM 12 O2' G A2103 119.615 113.255 39.289 1.00 92.72 O
ATOM 13 C1' G A2103 121.181 115.062 39.229 1.00 96.37 C
ATOM 14 N9 G A2103 122.401 115.426 38.512 1.00 99.21 N
ATOM 15 C8 G A2103 123.657 115.596 39.044 1.00 99.94 C
ATOM 16 N7 G A2103 124.548 115.941 38.155 1.00101.27 N
ATOM 17 C5 G A2103 123.840 115.998 36.961 1.00101.42 C
ATOM 18 C6 G A2103 124.274 116.326 35.649 1.00101.93 C
ATOM 19 O6 G A2103 125.406 116.647 35.269 1.00103.11 O
ATOM 20 N1 G A2103 123.231 116.259 34.732 1.00101.41 N
ATOM 21 C2 G A2103 121.938 115.924 35.033 1.00100.56 C
ATOM 22 N2 G A2103 121.082 115.920 34.005 1.00100.36 N
ATOM 23 N3 G A2103 121.517 115.618 36.250 1.00100.72 N
ATOM 24 C4 G A2103 122.515 115.676 37.160 1.00100.41 C
ATOM 25 P A A2104 121.936 110.776 41.260 1.00 88.35 P
ATOM 26 OP1 A A2104 121.392 109.826 42.266 1.00 88.44 O
ATOM 27 OP2 A A2104 123.373 111.153 41.309 1.00 89.04 O
ATOM 28 O5' A A2104 121.582 110.234 39.806 1.00 85.71 O
TER

ATOM 1 O3' C B2087 129.935 113.708 33.259 1.00106.68 O
ATOM 2 P U B2088 129.272 115.179 33.262 1.00103.88 P
ATOM 3 OP1 U B2088 130.153 116.102 32.503 1.00104.10 O
ATOM 4 OP2 U B2088 128.905 115.511 34.662 1.00104.52 O
ATOM 5 O5' U B2088 127.945 115.006 32.399 1.00101.79 O
ATOM 6 C5' U B2088 128.013 114.654 31.004 1.00 97.02 C
ATOM 7 C4' U B2088 126.629 114.631 30.396 1.00 93.50 C
ATOM 8 O4' U B2088 125.808 113.666 31.114 1.00 92.91 O
ATOM 9 C3' U B2088 125.848 115.943 30.425 1.00 90.96 C
ATOM 10 O3' U B2088 124.996 115.936 29.288 1.00 88.23 O
ATOM 11 C2' U B2088 125.021 115.801 31.697 1.00 91.17 C
ATOM 12 O2' U B2088 123.839 116.575 31.714 1.00 90.76 O
ATOM 13 C1' U B2088 124.671 114.317 31.649 1.00 92.53 C
ATOM 14 N1 U B2088 124.349 113.724 32.957 1.00 93.27 N
ATOM 15 C2 U B2088 123.029 113.375 33.194 1.00 93.35 C
ATOM 16 O2 U B2088 122.135 113.553 32.381 1.00 93.16 O
ATOM 17 N3 U B2088 122.793 112.807 34.420 1.00 93.81 N
ATOM 18 C4 U B2088 123.715 112.557 35.413 1.00 94.59 C
ATOM 19 O4 U B2088 123.344 112.028 36.462 1.00 95.81 O
ATOM 20 C5 U B2088 125.053 112.955 35.099 1.00 94.01 C
ATOM 21 C6 U B2088 125.317 113.511 33.914 1.00 93.30 C
ATOM 22 P C B2089 124.410 117.311 28.696 1.00 86.71 P
ATOM 23 OP1 C B2089 125.342 117.810 27.664 1.00 87.44 O
ATOM 24 OP2 C B2089 124.021 118.205 29.818 1.00 86.88 O
ATOM 25 O5' C B2089 123.094 116.800 27.954 1.00 86.82 O
TER

Atoms:
OP1: (124.012,114.038,44.739)
OP2: (125.748,114.928,43.068)
C3': (121.588,113.303,40.746)
C1': (121.181,115.062,39.229)
C5': (121.916,114.840,42.765)
O6: (125.406,116.647,35.269)
O4': (121.244,115.603,40.543)
C8: (123.657,115.596,39.044)
C2: (121.938,115.924,35.033)
C6: (124.274,116.326,35.649)
C5: (123.840,115.998,36.961)
C4: (122.515,115.676,37.160)
P: (124.393,114.999,43.669)
C4': (121.133,114.528,41.511)
C2': (120.995,113.549,39.366)
O2': (119.615,113.255,39.289)
N1: (123.231,116.259,34.732)
N2: (121.082,115.920,34.005)
N3: (121.517,115.618,36.250)
N7: (124.548,115.941,38.155)
N9: (122.401,115.426,38.512)
O5': (123.328,114.878,42.487)
O3': (121.091,112.130,41.355)
C4: (123.715,112.557,35.413)
N3: (122.793,112.807,34.420)
OP1: (130.153,116.102,32.503)
OP2: (128.905,115.511,34.662)
C2: (123.029,113.375,33.194)
C1': (124.671,114.317,31.649)
C3': (125.848,115.943,30.425)
O5': (127.945,115.006,32.399)
O4': (125.808,113.666,31.114)
C5': (128.013,114.654,31.004)
P: (129.272,115.179,33.262)
C4': (126.629,114.631,30.396)
C2': (125.021,115.801,31.697)
O2': (123.839,116.575,31.714)
N1: (124.349,113.724,32.957)
O4: (123.344,112.028,36.462)
O2: (122.135,113.553,32.381)
C6: (125.317,113.511,33.914)
C5: (125.053,112.955,35.099)
O3': (124.996,115.936,29.288)
Image (generated by PyMOL):
PyMOL image
show in jmol