ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02019:02448

Extra

PDB:
ATOM 1 O3' G A2018 52.005 111.532 108.190 1.00 53.02 O
ATOM 2 P G A2019 52.519 113.050 108.339 1.00 51.61 P
ATOM 3 OP1 G A2019 53.330 113.364 107.149 1.00 47.03 O
ATOM 4 OP2 G A2019 53.103 113.214 109.697 1.00 53.04 O
ATOM 5 O5' G A2019 51.200 113.937 108.325 1.00 49.36 O
ATOM 6 C5' G A2019 50.666 114.399 107.096 1.00 47.17 C
ATOM 7 C4' G A2019 50.710 115.904 107.024 1.00 45.85 C
ATOM 8 O4' G A2019 51.999 116.424 107.477 1.00 45.56 O
ATOM 9 C3' G A2019 50.525 116.422 105.603 1.00 43.60 C
ATOM 10 O3' G A2019 49.743 117.601 105.630 1.00 42.15 O
ATOM 11 C2' G A2019 51.958 116.714 105.168 1.00 43.76 C
ATOM 12 O2' G A2019 52.077 117.638 104.109 1.00 43.07 O
ATOM 13 C1' G A2019 52.544 117.258 106.468 1.00 44.37 C
ATOM 14 N9 G A2019 54.004 117.258 106.569 1.00 43.36 N
ATOM 15 C8 G A2019 54.911 116.815 105.634 1.00 42.87 C
ATOM 16 N7 G A2019 56.151 116.972 106.006 1.00 41.87 N
ATOM 17 C5 G A2019 56.060 117.549 107.266 1.00 43.99 C
ATOM 18 C6 G A2019 57.083 117.952 108.177 1.00 43.83 C
ATOM 19 O6 G A2019 58.306 117.892 108.039 1.00 42.21 O
ATOM 20 N1 G A2019 56.548 118.476 109.345 1.00 43.96 N
ATOM 21 C2 G A2019 55.209 118.611 109.609 1.00 44.59 C
ATOM 22 N2 G A2019 54.897 119.145 110.800 1.00 45.34 N
ATOM 23 N3 G A2019 54.249 118.251 108.772 1.00 43.32 N
ATOM 24 C4 G A2019 54.743 117.728 107.629 1.00 43.56 C
ATOM 25 P A A2020 48.218 117.536 105.145 1.00 42.35 P
ATOM 26 OP1 A A2020 47.437 117.031 106.300 1.00 41.45 O
ATOM 27 OP2 A A2020 48.148 116.825 103.839 1.00 40.86 O
ATOM 28 O5' A A2020 47.819 119.051 104.896 1.00 41.91 O
TER

ATOM 1 O3' G B2447 56.841 121.818 114.942 1.00 37.03 O
ATOM 2 P U B2448 57.131 122.544 113.527 1.00 36.24 P
ATOM 3 OP1 U B2448 57.201 124.008 113.721 1.00 37.16 O
ATOM 4 OP2 U B2448 56.150 121.990 112.571 1.00 36.39 O
ATOM 5 O5' U B2448 58.568 122.025 113.076 1.00 37.47 O
ATOM 6 C5' U B2448 58.901 120.615 113.075 1.00 37.95 C
ATOM 7 C4' U B2448 59.647 120.233 111.805 1.00 37.47 C
ATOM 8 O4' U B2448 58.708 120.065 110.704 1.00 40.26 O
ATOM 9 C3' U B2448 60.720 121.196 111.290 1.00 38.57 C
ATOM 10 O3' U B2448 61.753 120.425 110.671 1.00 39.44 O
ATOM 11 C2' U B2448 59.974 121.947 110.189 1.00 37.96 C
ATOM 12 O2' U B2448 60.839 122.500 109.223 1.00 38.47 O
ATOM 13 C1' U B2448 59.165 120.802 109.590 1.00 38.61 C
ATOM 14 N1 U B2448 58.017 121.106 108.720 1.00 41.84 N
ATOM 15 C2 U B2448 58.175 120.927 107.343 1.00 41.22 C
ATOM 16 O2 U B2448 59.240 120.681 106.816 1.00 41.66 O
ATOM 17 N3 U B2448 57.028 121.052 106.607 1.00 42.18 N
ATOM 18 C4 U B2448 55.773 121.374 107.072 1.00 42.80 C
ATOM 19 O4 U B2448 54.828 121.399 106.282 1.00 41.97 O
ATOM 20 C5 U B2448 55.707 121.648 108.480 1.00 43.09 C
ATOM 21 C6 U B2448 56.804 121.505 109.240 1.00 42.88 C
ATOM 22 P C B2449 63.299 120.859 110.820 1.00 39.87 P
ATOM 23 OP1 C B2449 63.415 122.048 111.716 1.00 37.07 O
ATOM 24 OP2 C B2449 63.862 120.920 109.454 1.00 37.68 O
ATOM 25 O5' C B2449 63.948 119.618 111.580 1.00 37.99 O
TER

Atoms:
OP1: (53.330,113.364,107.149)
OP2: (53.103,113.214,109.697)
C3': (50.525,116.422,105.603)
C1': (52.544,117.258,106.468)
C5': (50.666,114.399,107.096)
O6: (58.306,117.892,108.039)
O4': (51.999,116.424,107.477)
C8: (54.911,116.815,105.634)
C2: (55.209,118.611,109.609)
C6: (57.083,117.952,108.177)
C5: (56.060,117.549,107.266)
C4: (54.743,117.728,107.629)
P: (52.519,113.050,108.339)
C4': (50.710,115.904,107.024)
C2': (51.958,116.714,105.168)
O2': (52.077,117.638,104.109)
N1: (56.548,118.476,109.345)
N2: (54.897,119.145,110.800)
N3: (54.249,118.251,108.772)
N7: (56.151,116.972,106.006)
N9: (54.004,117.258,106.569)
O5': (51.200,113.937,108.325)
O3': (49.743,117.601,105.630)
C4: (55.773,121.374,107.072)
N3: (57.028,121.052,106.607)
OP1: (57.201,124.008,113.721)
OP2: (56.150,121.990,112.571)
C2: (58.175,120.927,107.343)
C1': (59.165,120.802,109.590)
C3': (60.720,121.196,111.290)
O5': (58.568,122.025,113.076)
O4': (58.708,120.065,110.704)
C5': (58.901,120.615,113.075)
P: (57.131,122.544,113.527)
C4': (59.647,120.233,111.805)
C2': (59.974,121.947,110.189)
O2': (60.839,122.500,109.223)
N1: (58.017,121.106,108.720)
O4: (54.828,121.399,106.282)
O2: (59.240,120.681,106.816)
C6: (56.804,121.505,109.240)
C5: (55.707,121.648,108.480)
O3': (61.753,120.425,110.671)
Image (generated by PyMOL):
PyMOL image
show in jmol