ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02103:02088

Extra

PDB:
ATOM 1 O3' G A2102 124.043 114.877 43.051 1.00 70.20 O
ATOM 2 P G A2103 124.135 113.360 42.509 1.00 70.43 P
ATOM 3 OP1 G A2103 123.772 112.468 43.645 1.00 70.35 O
ATOM 4 OP2 G A2103 125.425 113.156 41.804 1.00 69.16 O
ATOM 5 O5' G A2103 122.987 113.262 41.411 1.00 68.92 O
ATOM 6 C5' G A2103 121.609 113.156 41.787 1.00 65.83 C
ATOM 7 C4' G A2103 120.764 112.867 40.576 1.00 65.11 C
ATOM 8 O4' G A2103 120.783 114.001 39.667 1.00 65.15 O
ATOM 9 C3' G A2103 121.235 111.711 39.717 1.00 64.73 C
ATOM 10 O3' G A2103 120.850 110.463 40.276 1.00 64.67 O
ATOM 11 C2' G A2103 120.548 112.017 38.394 1.00 64.95 C
ATOM 12 O2' G A2103 119.170 111.729 38.438 1.00 64.08 O
ATOM 13 C1' G A2103 120.700 113.537 38.327 1.00 65.34 C
ATOM 14 N9 G A2103 121.901 113.962 37.609 1.00 66.99 N
ATOM 15 C8 G A2103 123.165 114.113 38.128 1.00 67.72 C
ATOM 16 N7 G A2103 124.038 114.515 37.245 1.00 68.33 N
ATOM 17 C5 G A2103 123.311 114.634 36.068 1.00 68.04 C
ATOM 18 C6 G A2103 123.723 115.034 34.768 1.00 67.79 C
ATOM 19 O6 G A2103 124.846 115.369 34.387 1.00 69.22 O
ATOM 20 N1 G A2103 122.667 115.017 33.867 1.00 67.24 N
ATOM 21 C2 G A2103 121.380 114.658 34.169 1.00 67.41 C
ATOM 22 N2 G A2103 120.505 114.706 33.154 1.00 67.06 N
ATOM 23 N3 G A2103 120.980 114.281 35.374 1.00 68.19 N
ATOM 24 C4 G A2103 121.991 114.294 36.271 1.00 67.61 C
ATOM 25 P A A2104 121.732 109.149 39.984 1.00 65.77 P
ATOM 26 OP1 A A2104 121.354 108.132 41.005 1.00 64.23 O
ATOM 27 OP2 A A2104 123.159 109.548 39.841 1.00 65.84 O
ATOM 28 O5' A A2104 121.209 108.661 38.560 1.00 64.34 O
TER

ATOM 1 O3' C B2087 129.374 112.014 31.787 1.00 83.74 O
ATOM 2 P U B2088 128.735 113.490 31.878 1.00 82.39 P
ATOM 3 OP1 U B2088 129.601 114.425 31.115 1.00 81.84 O
ATOM 4 OP2 U B2088 128.433 113.776 33.308 1.00 81.81 O
ATOM 5 O5' U B2088 127.354 113.374 31.093 1.00 78.90 O
ATOM 6 C5' U B2088 127.320 113.044 29.695 1.00 75.01 C
ATOM 7 C4' U B2088 125.900 113.084 29.183 1.00 72.04 C
ATOM 8 O4' U B2088 125.090 112.170 29.973 1.00 72.20 O
ATOM 9 C3' U B2088 125.188 114.434 29.255 1.00 71.23 C
ATOM 10 O3' U B2088 124.253 114.479 28.186 1.00 69.42 O
ATOM 11 C2' U B2088 124.445 114.340 30.584 1.00 71.57 C
ATOM 12 O2' U B2088 123.311 115.176 30.677 1.00 72.35 O
ATOM 13 C1' U B2088 124.016 112.878 30.566 1.00 71.77 C
ATOM 14 N1 U B2088 123.735 112.303 31.890 1.00 71.52 N
ATOM 15 C2 U B2088 122.436 111.877 32.145 1.00 71.51 C
ATOM 16 O2 U B2088 121.525 111.974 31.331 1.00 70.34 O
ATOM 17 N3 U B2088 122.243 111.332 33.389 1.00 71.17 N
ATOM 18 C4 U B2088 123.185 111.174 34.383 1.00 72.18 C
ATOM 19 O4 U B2088 122.855 110.653 35.450 1.00 72.92 O
ATOM 20 C5 U B2088 124.496 111.650 34.050 1.00 72.00 C
ATOM 21 C6 U B2088 124.720 112.183 32.847 1.00 71.50 C
ATOM 22 P C B2089 123.761 115.889 27.594 1.00 70.19 P
ATOM 23 OP1 C B2089 124.691 116.287 26.512 1.00 73.02 O
ATOM 24 OP2 C B2089 123.503 116.824 28.716 1.00 70.71 O
ATOM 25 O5' C B2089 122.374 115.497 26.912 1.00 70.38 O
TER

Atoms:
OP1: (123.772,112.468,43.645)
OP2: (125.425,113.156,41.804)
C3': (121.235,111.711,39.717)
C1': (120.700,113.537,38.327)
C5': (121.609,113.156,41.787)
O6: (124.846,115.369,34.387)
O4': (120.783,114.001,39.667)
C8: (123.165,114.113,38.128)
C2: (121.380,114.658,34.169)
C6: (123.723,115.034,34.768)
C5: (123.311,114.634,36.068)
C4: (121.991,114.294,36.271)
P: (124.135,113.360,42.509)
C4': (120.764,112.867,40.576)
C2': (120.548,112.017,38.394)
O2': (119.170,111.729,38.438)
N1: (122.667,115.017,33.867)
N2: (120.505,114.706,33.154)
N3: (120.980,114.281,35.374)
N7: (124.038,114.515,37.245)
N9: (121.901,113.962,37.609)
O5': (122.987,113.262,41.411)
O3': (120.850,110.463,40.276)
C4: (123.185,111.174,34.383)
N3: (122.243,111.332,33.389)
OP1: (129.601,114.425,31.115)
OP2: (128.433,113.776,33.308)
C2: (122.436,111.877,32.145)
C1': (124.016,112.878,30.566)
C3': (125.188,114.434,29.255)
O5': (127.354,113.374,31.093)
O4': (125.090,112.170,29.973)
C5': (127.320,113.044,29.695)
P: (128.735,113.490,31.878)
C4': (125.900,113.084,29.183)
C2': (124.445,114.340,30.584)
O2': (123.311,115.176,30.677)
N1: (123.735,112.303,31.890)
O4: (122.855,110.653,35.450)
O2: (121.525,111.974,31.331)
C6: (124.720,112.183,32.847)
C5: (124.496,111.650,34.050)
O3': (124.253,114.479,28.186)
Image (generated by PyMOL):
PyMOL image
show in jmol