ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02103:02088

Extra

PDB:
ATOM 1 O3' G A2102 124.199 115.107 43.190 1.00 74.17 O
ATOM 2 P G A2103 124.275 113.590 42.640 1.00 73.33 P
ATOM 3 OP1 G A2103 123.883 112.691 43.757 1.00 73.71 O
ATOM 4 OP2 G A2103 125.573 113.369 41.949 1.00 73.74 O
ATOM 5 O5' G A2103 123.138 113.522 41.529 1.00 72.49 O
ATOM 6 C5' G A2103 121.753 113.454 41.893 1.00 68.81 C
ATOM 7 C4' G A2103 120.909 113.168 40.680 1.00 67.07 C
ATOM 8 O4' G A2103 120.939 114.292 39.760 1.00 66.59 O
ATOM 9 C3' G A2103 121.366 112.002 39.828 1.00 65.93 C
ATOM 10 O3' G A2103 120.992 110.758 40.399 1.00 65.74 O
ATOM 11 C2' G A2103 120.662 112.295 38.512 1.00 66.06 C
ATOM 12 O2' G A2103 119.282 112.009 38.574 1.00 63.64 O
ATOM 13 C1' G A2103 120.829 113.813 38.424 1.00 67.37 C
ATOM 14 N9 G A2103 122.028 114.207 37.685 1.00 69.99 N
ATOM 15 C8 G A2103 123.288 114.398 38.201 1.00 70.92 C
ATOM 16 N7 G A2103 124.165 114.750 37.301 1.00 72.01 N
ATOM 17 C5 G A2103 123.446 114.791 36.114 1.00 72.08 C
ATOM 18 C6 G A2103 123.869 115.108 34.794 1.00 72.85 C
ATOM 19 O6 G A2103 124.998 115.421 34.402 1.00 75.33 O
ATOM 20 N1 G A2103 122.820 115.030 33.887 1.00 72.27 N
ATOM 21 C2 G A2103 121.530 114.688 34.202 1.00 71.85 C
ATOM 22 N2 G A2103 120.664 114.670 33.178 1.00 71.90 N
ATOM 23 N3 G A2103 121.121 114.387 35.427 1.00 71.63 N
ATOM 24 C4 G A2103 122.125 114.460 36.329 1.00 71.15 C
ATOM 25 P A A2104 121.879 109.453 40.103 1.00 66.12 P
ATOM 26 OP1 A A2104 121.497 108.408 41.097 1.00 64.88 O
ATOM 27 OP2 A A2104 123.302 109.874 39.986 1.00 66.81 O
ATOM 28 O5' A A2104 121.391 108.987 38.660 1.00 65.55 O
TER

ATOM 1 O3' C B2087 129.539 112.230 31.862 1.00 85.39 O
ATOM 2 P U B2088 128.897 113.709 31.945 1.00 82.26 P
ATOM 3 OP1 U B2088 129.751 114.653 31.181 1.00 81.44 O
ATOM 4 OP2 U B2088 128.590 113.991 33.375 1.00 81.72 O
ATOM 5 O5' U B2088 127.523 113.580 31.154 1.00 79.89 O
ATOM 6 C5' U B2088 127.502 113.178 29.777 1.00 76.02 C
ATOM 7 C4' U B2088 126.089 113.203 29.248 1.00 73.77 C
ATOM 8 O4' U B2088 125.277 112.285 30.033 1.00 73.78 O
ATOM 9 C3' U B2088 125.373 114.551 29.297 1.00 72.57 C
ATOM 10 O3' U B2088 124.487 114.605 28.189 1.00 70.88 O
ATOM 11 C2' U B2088 124.586 114.460 30.602 1.00 73.06 C
ATOM 12 O2' U B2088 123.433 115.278 30.633 1.00 73.41 O
ATOM 13 C1' U B2088 124.190 112.986 30.610 1.00 73.56 C
ATOM 14 N1 U B2088 123.923 112.434 31.948 1.00 73.17 N
ATOM 15 C2 U B2088 122.631 112.000 32.227 1.00 72.86 C
ATOM 16 O2 U B2088 121.712 112.063 31.421 1.00 71.32 O
ATOM 17 N3 U B2088 122.455 111.486 33.490 1.00 72.41 N
ATOM 18 C4 U B2088 123.408 111.362 34.480 1.00 73.67 C
ATOM 19 O4 U B2088 123.092 110.870 35.566 1.00 74.76 O
ATOM 20 C5 U B2088 124.712 111.838 34.121 1.00 73.35 C
ATOM 21 C6 U B2088 124.920 112.345 32.902 1.00 73.23 C
ATOM 22 P C B2089 123.967 116.021 27.631 1.00 70.74 P
ATOM 23 OP1 C B2089 124.764 116.370 26.426 1.00 73.02 O
ATOM 24 OP2 C B2089 123.872 116.992 28.754 1.00 69.53 O
ATOM 25 O5' C B2089 122.506 115.641 27.127 1.00 70.59 O
TER

Atoms:
OP1: (123.883,112.691,43.757)
OP2: (125.573,113.369,41.949)
C3': (121.366,112.002,39.828)
C1': (120.829,113.813,38.424)
C5': (121.753,113.454,41.893)
O6: (124.998,115.421,34.402)
O4': (120.939,114.292,39.760)
C8: (123.288,114.398,38.201)
C2: (121.530,114.688,34.202)
C6: (123.869,115.108,34.794)
C5: (123.446,114.791,36.114)
C4: (122.125,114.460,36.329)
P: (124.275,113.590,42.640)
C4': (120.909,113.168,40.680)
C2': (120.662,112.295,38.512)
O2': (119.282,112.009,38.574)
N1: (122.820,115.030,33.887)
N2: (120.664,114.670,33.178)
N3: (121.121,114.387,35.427)
N7: (124.165,114.750,37.301)
N9: (122.028,114.207,37.685)
O5': (123.138,113.522,41.529)
O3': (120.992,110.758,40.399)
C4: (123.408,111.362,34.480)
N3: (122.455,111.486,33.490)
OP1: (129.751,114.653,31.181)
OP2: (128.590,113.991,33.375)
C2: (122.631,112.000,32.227)
C1': (124.190,112.986,30.610)
C3': (125.373,114.551,29.297)
O5': (127.523,113.580,31.154)
O4': (125.277,112.285,30.033)
C5': (127.502,113.178,29.777)
P: (128.897,113.709,31.945)
C4': (126.089,113.203,29.248)
C2': (124.586,114.460,30.602)
O2': (123.433,115.278,30.633)
N1: (123.923,112.434,31.948)
O4: (123.092,110.870,35.566)
O2: (121.712,112.063,31.421)
C6: (124.920,112.345,32.902)
C5: (124.712,111.838,34.121)
O3': (124.487,114.605,28.189)
Image (generated by PyMOL):
PyMOL image
show in jmol