ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02019:02448

Extra

PDB:
ATOM 1 O3' G A2018 52.137 112.113 108.454 1.00 48.92 O
ATOM 2 P G A2019 52.669 113.618 108.612 1.00 48.00 P
ATOM 3 OP1 G A2019 53.579 113.866 107.466 1.00 44.32 O
ATOM 4 OP2 G A2019 53.153 113.788 110.008 1.00 50.16 O
ATOM 5 O5' G A2019 51.388 114.542 108.448 1.00 45.29 O
ATOM 6 C5' G A2019 51.008 115.011 107.157 1.00 42.44 C
ATOM 7 C4' G A2019 51.021 116.518 107.106 1.00 41.46 C
ATOM 8 O4' G A2019 52.305 117.038 107.577 1.00 39.44 O
ATOM 9 C3' G A2019 50.847 117.053 105.688 1.00 39.51 C
ATOM 10 O3' G A2019 50.069 118.235 105.699 1.00 38.97 O
ATOM 11 C2' G A2019 52.283 117.345 105.268 1.00 38.80 C
ATOM 12 O2' G A2019 52.402 118.273 104.214 1.00 37.49 O
ATOM 13 C1' G A2019 52.859 117.876 106.579 1.00 39.42 C
ATOM 14 N9 G A2019 54.318 117.873 106.689 1.00 39.00 N
ATOM 15 C8 G A2019 55.221 117.445 105.747 1.00 38.42 C
ATOM 16 N7 G A2019 56.462 117.624 106.105 1.00 39.05 N
ATOM 17 C5 G A2019 56.379 118.198 107.366 1.00 40.53 C
ATOM 18 C6 G A2019 57.406 118.628 108.253 1.00 40.82 C
ATOM 19 O6 G A2019 58.627 118.626 108.079 1.00 37.50 O
ATOM 20 N1 G A2019 56.882 119.117 109.441 1.00 40.97 N
ATOM 21 C2 G A2019 55.547 119.208 109.735 1.00 39.76 C
ATOM 22 N2 G A2019 55.252 119.705 110.944 1.00 39.11 N
ATOM 23 N3 G A2019 54.578 118.839 108.911 1.00 37.66 N
ATOM 24 C4 G A2019 55.064 118.341 107.753 1.00 40.00 C
ATOM 25 P A A2020 48.529 118.162 105.269 1.00 39.19 P
ATOM 26 OP1 A A2020 47.794 117.616 106.440 1.00 39.75 O
ATOM 27 OP2 A A2020 48.413 117.483 103.953 1.00 40.03 O
ATOM 28 O5' A A2020 48.125 119.678 105.052 1.00 40.54 O
TER

ATOM 1 O3' G B2447 57.079 122.437 115.014 1.00 33.15 O
ATOM 2 P U B2448 57.409 123.140 113.602 1.00 31.37 P
ATOM 3 OP1 U B2448 57.484 124.603 113.773 1.00 31.69 O
ATOM 4 OP2 U B2448 56.414 122.575 112.658 1.00 32.91 O
ATOM 5 O5' U B2448 58.859 122.621 113.191 1.00 31.98 O
ATOM 6 C5' U B2448 59.190 121.211 113.156 1.00 33.70 C
ATOM 7 C4' U B2448 59.928 120.852 111.871 1.00 34.27 C
ATOM 8 O4' U B2448 58.981 120.691 110.778 1.00 37.56 O
ATOM 9 C3' U B2448 61.003 121.819 111.349 1.00 36.47 C
ATOM 10 O3' U B2448 62.028 121.055 110.699 1.00 34.71 O
ATOM 11 C2' U B2448 60.250 122.572 110.254 1.00 34.84 C
ATOM 12 O2' U B2448 61.105 123.115 109.267 1.00 34.68 O
ATOM 13 C1' U B2448 59.435 121.430 109.663 1.00 36.21 C
ATOM 14 N1 U B2448 58.295 121.727 108.780 1.00 39.54 N
ATOM 15 C2 U B2448 58.487 121.576 107.404 1.00 39.07 C
ATOM 16 O2 U B2448 59.573 121.351 106.901 1.00 41.41 O
ATOM 17 N3 U B2448 57.357 121.702 106.643 1.00 37.61 N
ATOM 18 C4 U B2448 56.087 121.996 107.090 1.00 42.06 C
ATOM 19 O4 U B2448 55.156 122.029 106.282 1.00 42.37 O
ATOM 20 C5 U B2448 55.986 122.234 108.504 1.00 40.87 C
ATOM 21 C6 U B2448 57.068 122.092 109.281 1.00 39.53 C
ATOM 22 P C B2449 63.579 121.403 110.929 1.00 34.15 P
ATOM 23 OP1 C B2449 63.707 122.617 111.786 1.00 34.90 O
ATOM 24 OP2 C B2449 64.241 121.369 109.604 1.00 31.80 O
ATOM 25 O5' C B2449 64.136 120.164 111.764 1.00 30.97 O
TER

Atoms:
OP1: (53.579,113.866,107.466)
OP2: (53.153,113.788,110.008)
C3': (50.847,117.053,105.688)
C1': (52.859,117.876,106.579)
C5': (51.008,115.011,107.157)
O6: (58.627,118.626,108.079)
O4': (52.305,117.038,107.577)
C8: (55.221,117.445,105.747)
C2: (55.547,119.208,109.735)
C6: (57.406,118.628,108.253)
C5: (56.379,118.198,107.366)
C4: (55.064,118.341,107.753)
P: (52.669,113.618,108.612)
C4': (51.021,116.518,107.106)
C2': (52.283,117.345,105.268)
O2': (52.402,118.273,104.214)
N1: (56.882,119.117,109.441)
N2: (55.252,119.705,110.944)
N3: (54.578,118.839,108.911)
N7: (56.462,117.624,106.105)
N9: (54.318,117.873,106.689)
O5': (51.388,114.542,108.448)
O3': (50.069,118.235,105.699)
C4: (56.087,121.996,107.090)
N3: (57.357,121.702,106.643)
OP1: (57.484,124.603,113.773)
OP2: (56.414,122.575,112.658)
C2: (58.487,121.576,107.404)
C1': (59.435,121.430,109.663)
C3': (61.003,121.819,111.349)
O5': (58.859,122.621,113.191)
O4': (58.981,120.691,110.778)
C5': (59.190,121.211,113.156)
P: (57.409,123.140,113.602)
C4': (59.928,120.852,111.871)
C2': (60.250,122.572,110.254)
O2': (61.105,123.115,109.267)
N1: (58.295,121.727,108.780)
O4: (55.156,122.029,106.282)
O2: (59.573,121.351,106.901)
C6: (57.068,122.092,109.281)
C5: (55.986,122.234,108.504)
O3': (62.028,121.055,110.699)
Image (generated by PyMOL):
PyMOL image
show in jmol