ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:02019:02448

Extra

PDB:
ATOM 1 O3' G A2018 52.493 112.505 107.630 1.00 43.93 O
ATOM 2 P G A2019 52.896 114.060 107.708 1.00 41.50 P
ATOM 3 OP1 G A2019 53.414 114.476 106.388 1.00 41.55 O
ATOM 4 OP2 G A2019 53.726 114.244 108.914 1.00 47.31 O
ATOM 5 O5' G A2019 51.536 114.832 107.998 1.00 41.72 O
ATOM 6 C5' G A2019 50.774 115.359 106.920 1.00 38.23 C
ATOM 7 C4' G A2019 50.822 116.867 106.912 1.00 35.87 C
ATOM 8 O4' G A2019 52.091 117.388 107.425 1.00 37.38 O
ATOM 9 C3' G A2019 50.687 117.416 105.499 1.00 34.52 C
ATOM 10 O3' G A2019 49.947 118.615 105.529 1.00 33.01 O
ATOM 11 C2' G A2019 52.135 117.690 105.120 1.00 34.83 C
ATOM 12 O2' G A2019 52.317 118.604 104.062 1.00 33.45 O
ATOM 13 C1' G A2019 52.669 118.231 106.445 1.00 36.84 C
ATOM 14 N9 G A2019 54.126 118.248 106.576 1.00 37.01 N
ATOM 15 C8 G A2019 55.036 117.965 105.588 1.00 37.29 C
ATOM 16 N7 G A2019 56.271 118.145 105.958 1.00 38.39 N
ATOM 17 C5 G A2019 56.178 118.555 107.276 1.00 39.85 C
ATOM 18 C6 G A2019 57.195 118.913 108.194 1.00 40.12 C
ATOM 19 O6 G A2019 58.408 118.970 108.002 1.00 41.08 O
ATOM 20 N1 G A2019 56.674 119.246 109.439 1.00 39.57 N
ATOM 21 C2 G A2019 55.338 119.256 109.755 1.00 40.54 C
ATOM 22 N2 G A2019 55.034 119.610 111.014 1.00 38.24 N
ATOM 23 N3 G A2019 54.371 118.942 108.896 1.00 41.44 N
ATOM 24 C4 G A2019 54.861 118.602 107.684 1.00 39.14 C
ATOM 25 P A A2020 48.382 118.578 105.205 1.00 35.39 P
ATOM 26 OP1 A A2020 47.702 118.105 106.437 1.00 32.90 O
ATOM 27 OP2 A A2020 48.175 117.849 103.931 1.00 35.91 O
ATOM 28 O5' A A2020 48.015 120.102 104.941 1.00 34.61 O
TER

ATOM 1 O3' G B2447 56.857 122.822 114.879 1.00 30.91 O
ATOM 2 P U B2448 57.107 123.588 113.488 1.00 30.63 P
ATOM 3 OP1 U B2448 57.205 125.046 113.731 1.00 30.85 O
ATOM 4 OP2 U B2448 56.078 123.074 112.563 1.00 30.58 O
ATOM 5 O5' U B2448 58.514 123.070 112.962 1.00 27.77 O
ATOM 6 C5' U B2448 58.864 121.679 113.009 1.00 29.09 C
ATOM 7 C4' U B2448 59.587 121.276 111.739 1.00 31.59 C
ATOM 8 O4' U B2448 58.625 121.064 110.671 1.00 34.49 O
ATOM 9 C3' U B2448 60.619 122.255 111.174 1.00 31.38 C
ATOM 10 O3' U B2448 61.633 121.489 110.543 1.00 30.04 O
ATOM 11 C2' U B2448 59.826 122.964 110.080 1.00 33.03 C
ATOM 12 O2' U B2448 60.657 123.508 109.076 1.00 33.75 O
ATOM 13 C1' U B2448 59.033 121.784 109.532 1.00 34.01 C
ATOM 14 N1 U B2448 57.861 122.015 108.677 1.00 36.19 N
ATOM 15 C2 U B2448 58.019 121.854 107.302 1.00 36.55 C
ATOM 16 O2 U B2448 59.096 121.680 106.770 1.00 36.39 O
ATOM 17 N3 U B2448 56.859 121.918 106.577 1.00 37.00 N
ATOM 18 C4 U B2448 55.590 122.152 107.062 1.00 36.96 C
ATOM 19 O4 U B2448 54.628 121.998 106.316 1.00 38.37 O
ATOM 20 C5 U B2448 55.524 122.396 108.470 1.00 36.99 C
ATOM 21 C6 U B2448 56.633 122.322 109.212 1.00 35.91 C
ATOM 22 P C B2449 63.176 121.897 110.700 1.00 32.97 P
ATOM 23 OP1 C B2449 63.274 123.134 111.515 1.00 30.26 O
ATOM 24 OP2 C B2449 63.811 121.854 109.359 1.00 30.10 O
ATOM 25 O5' C B2449 63.777 120.689 111.540 1.00 32.83 O
TER

Atoms:
OP1: (53.414,114.476,106.388)
OP2: (53.726,114.244,108.914)
C3': (50.687,117.416,105.499)
C1': (52.669,118.231,106.445)
C5': (50.774,115.359,106.920)
O6: (58.408,118.970,108.002)
O4': (52.091,117.388,107.425)
C8: (55.036,117.965,105.588)
C2: (55.338,119.256,109.755)
C6: (57.195,118.913,108.194)
C5: (56.178,118.555,107.276)
C4: (54.861,118.602,107.684)
P: (52.896,114.060,107.708)
C4': (50.822,116.867,106.912)
C2': (52.135,117.690,105.120)
O2': (52.317,118.604,104.062)
N1: (56.674,119.246,109.439)
N2: (55.034,119.610,111.014)
N3: (54.371,118.942,108.896)
N7: (56.271,118.145,105.958)
N9: (54.126,118.248,106.576)
O5': (51.536,114.832,107.998)
O3': (49.947,118.615,105.529)
C4: (55.590,122.152,107.062)
N3: (56.859,121.918,106.577)
OP1: (57.205,125.046,113.731)
OP2: (56.078,123.074,112.563)
C2: (58.019,121.854,107.302)
C1': (59.033,121.784,109.532)
C3': (60.619,122.255,111.174)
O5': (58.514,123.070,112.962)
O4': (58.625,121.064,110.671)
C5': (58.864,121.679,113.009)
P: (57.107,123.588,113.488)
C4': (59.587,121.276,111.739)
C2': (59.826,122.964,110.080)
O2': (60.657,123.508,109.076)
N1: (57.861,122.015,108.677)
O4: (54.628,121.998,106.316)
O2: (59.096,121.680,106.770)
C6: (56.633,122.322,109.212)
C5: (55.524,122.396,108.470)
O3': (61.633,121.489,110.543)
Image (generated by PyMOL):
PyMOL image
show in jmol