Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02019:02448
Extra
PDB:
ATOM 1 O3' G A2018 52.431 112.706 107.630 1.00 42.00 O
ATOM 2 P G A2019 52.839 114.254 107.730 1.00 38.86 P
ATOM 3 OP1 G A2019 53.350 114.688 106.413 1.00 38.61 O
ATOM 4 OP2 G A2019 53.674 114.429 108.935 1.00 43.74 O
ATOM 5 O5' G A2019 51.474 115.016 108.027 1.00 40.08 O
ATOM 6 C5' G A2019 50.702 115.543 106.954 1.00 37.49 C
ATOM 7 C4' G A2019 50.764 117.053 106.934 1.00 34.56 C
ATOM 8 O4' G A2019 52.040 117.560 107.443 1.00 37.08 O
ATOM 9 C3' G A2019 50.633 117.598 105.518 1.00 32.97 C
ATOM 10 O3' G A2019 49.907 118.802 105.541 1.00 30.95 O
ATOM 11 C2' G A2019 52.083 117.865 105.139 1.00 33.91 C
ATOM 12 O2' G A2019 52.268 118.785 104.086 1.00 34.25 O
ATOM 13 C1' G A2019 52.622 118.402 106.464 1.00 36.00 C
ATOM 14 N9 G A2019 54.081 118.406 106.591 1.00 35.50 N
ATOM 15 C8 G A2019 54.984 118.105 105.601 1.00 34.79 C
ATOM 16 N7 G A2019 56.223 118.274 105.964 1.00 35.60 N
ATOM 17 C5 G A2019 56.141 118.701 107.279 1.00 36.50 C
ATOM 18 C6 G A2019 57.169 119.056 108.188 1.00 35.92 C
ATOM 19 O6 G A2019 58.382 119.104 107.988 1.00 37.05 O
ATOM 20 N1 G A2019 56.659 119.398 109.434 1.00 34.14 N
ATOM 21 C2 G A2019 55.331 119.420 109.761 1.00 35.82 C
ATOM 22 N2 G A2019 55.046 119.772 111.024 1.00 33.74 N
ATOM 23 N3 G A2019 54.351 119.116 108.910 1.00 37.90 N
ATOM 24 C4 G A2019 54.828 118.765 107.694 1.00 36.66 C
ATOM 25 P A A2020 48.347 118.781 105.199 1.00 32.07 P
ATOM 26 OP1 A A2020 47.666 118.273 106.421 1.00 30.75 O
ATOM 27 OP2 A A2020 48.135 118.084 103.905 1.00 33.33 O
ATOM 28 O5' A A2020 47.998 120.315 104.968 1.00 30.91 O
TER
ATOM 1 O3' G B2447 56.768 122.993 114.868 1.00 27.98 O
ATOM 2 P U B2448 57.021 123.762 113.479 1.00 26.46 P
ATOM 3 OP1 U B2448 57.098 125.218 113.723 1.00 26.73 O
ATOM 4 OP2 U B2448 56.013 123.239 112.541 1.00 29.64 O
ATOM 5 O5' U B2448 58.433 123.249 112.959 1.00 27.05 O
ATOM 6 C5' U B2448 58.813 121.868 113.054 1.00 26.65 C
ATOM 7 C4' U B2448 59.547 121.439 111.800 1.00 28.87 C
ATOM 8 O4' U B2448 58.588 121.219 110.732 1.00 31.04 O
ATOM 9 C3' U B2448 60.591 122.399 111.227 1.00 27.77 C
ATOM 10 O3' U B2448 61.600 121.619 110.595 1.00 25.66 O
ATOM 11 C2' U B2448 59.800 123.111 110.132 1.00 30.63 C
ATOM 12 O2' U B2448 60.617 123.663 109.118 1.00 32.08 O
ATOM 13 C1' U B2448 58.996 121.936 109.590 1.00 30.73 C
ATOM 14 N1 U B2448 57.817 122.190 108.750 1.00 32.49 N
ATOM 15 C2 U B2448 57.960 122.049 107.372 1.00 32.36 C
ATOM 16 O2 U B2448 59.031 121.871 106.828 1.00 30.91 O
ATOM 17 N3 U B2448 56.793 122.136 106.659 1.00 32.20 N
ATOM 18 C4 U B2448 55.528 122.374 107.161 1.00 32.43 C
ATOM 19 O4 U B2448 54.554 122.217 106.426 1.00 34.36 O
ATOM 20 C5 U B2448 55.481 122.598 108.573 1.00 32.45 C
ATOM 21 C6 U B2448 56.597 122.501 109.302 1.00 31.77 C
ATOM 22 P C B2449 63.150 122.022 110.739 1.00 27.65 P
ATOM 23 OP1 C B2449 63.267 123.259 111.549 1.00 26.15 O
ATOM 24 OP2 C B2449 63.765 121.976 109.393 1.00 23.94 O
ATOM 25 O5' C B2449 63.753 120.813 111.581 1.00 29.15 O
TER
ATOM 2 P G A2019 52.839 114.254 107.730 1.00 38.86 P
ATOM 3 OP1 G A2019 53.350 114.688 106.413 1.00 38.61 O
ATOM 4 OP2 G A2019 53.674 114.429 108.935 1.00 43.74 O
ATOM 5 O5' G A2019 51.474 115.016 108.027 1.00 40.08 O
ATOM 6 C5' G A2019 50.702 115.543 106.954 1.00 37.49 C
ATOM 7 C4' G A2019 50.764 117.053 106.934 1.00 34.56 C
ATOM 8 O4' G A2019 52.040 117.560 107.443 1.00 37.08 O
ATOM 9 C3' G A2019 50.633 117.598 105.518 1.00 32.97 C
ATOM 10 O3' G A2019 49.907 118.802 105.541 1.00 30.95 O
ATOM 11 C2' G A2019 52.083 117.865 105.139 1.00 33.91 C
ATOM 12 O2' G A2019 52.268 118.785 104.086 1.00 34.25 O
ATOM 13 C1' G A2019 52.622 118.402 106.464 1.00 36.00 C
ATOM 14 N9 G A2019 54.081 118.406 106.591 1.00 35.50 N
ATOM 15 C8 G A2019 54.984 118.105 105.601 1.00 34.79 C
ATOM 16 N7 G A2019 56.223 118.274 105.964 1.00 35.60 N
ATOM 17 C5 G A2019 56.141 118.701 107.279 1.00 36.50 C
ATOM 18 C6 G A2019 57.169 119.056 108.188 1.00 35.92 C
ATOM 19 O6 G A2019 58.382 119.104 107.988 1.00 37.05 O
ATOM 20 N1 G A2019 56.659 119.398 109.434 1.00 34.14 N
ATOM 21 C2 G A2019 55.331 119.420 109.761 1.00 35.82 C
ATOM 22 N2 G A2019 55.046 119.772 111.024 1.00 33.74 N
ATOM 23 N3 G A2019 54.351 119.116 108.910 1.00 37.90 N
ATOM 24 C4 G A2019 54.828 118.765 107.694 1.00 36.66 C
ATOM 25 P A A2020 48.347 118.781 105.199 1.00 32.07 P
ATOM 26 OP1 A A2020 47.666 118.273 106.421 1.00 30.75 O
ATOM 27 OP2 A A2020 48.135 118.084 103.905 1.00 33.33 O
ATOM 28 O5' A A2020 47.998 120.315 104.968 1.00 30.91 O
TER
ATOM 1 O3' G B2447 56.768 122.993 114.868 1.00 27.98 O
ATOM 2 P U B2448 57.021 123.762 113.479 1.00 26.46 P
ATOM 3 OP1 U B2448 57.098 125.218 113.723 1.00 26.73 O
ATOM 4 OP2 U B2448 56.013 123.239 112.541 1.00 29.64 O
ATOM 5 O5' U B2448 58.433 123.249 112.959 1.00 27.05 O
ATOM 6 C5' U B2448 58.813 121.868 113.054 1.00 26.65 C
ATOM 7 C4' U B2448 59.547 121.439 111.800 1.00 28.87 C
ATOM 8 O4' U B2448 58.588 121.219 110.732 1.00 31.04 O
ATOM 9 C3' U B2448 60.591 122.399 111.227 1.00 27.77 C
ATOM 10 O3' U B2448 61.600 121.619 110.595 1.00 25.66 O
ATOM 11 C2' U B2448 59.800 123.111 110.132 1.00 30.63 C
ATOM 12 O2' U B2448 60.617 123.663 109.118 1.00 32.08 O
ATOM 13 C1' U B2448 58.996 121.936 109.590 1.00 30.73 C
ATOM 14 N1 U B2448 57.817 122.190 108.750 1.00 32.49 N
ATOM 15 C2 U B2448 57.960 122.049 107.372 1.00 32.36 C
ATOM 16 O2 U B2448 59.031 121.871 106.828 1.00 30.91 O
ATOM 17 N3 U B2448 56.793 122.136 106.659 1.00 32.20 N
ATOM 18 C4 U B2448 55.528 122.374 107.161 1.00 32.43 C
ATOM 19 O4 U B2448 54.554 122.217 106.426 1.00 34.36 O
ATOM 20 C5 U B2448 55.481 122.598 108.573 1.00 32.45 C
ATOM 21 C6 U B2448 56.597 122.501 109.302 1.00 31.77 C
ATOM 22 P C B2449 63.150 122.022 110.739 1.00 27.65 P
ATOM 23 OP1 C B2449 63.267 123.259 111.549 1.00 26.15 O
ATOM 24 OP2 C B2449 63.765 121.976 109.393 1.00 23.94 O
ATOM 25 O5' C B2449 63.753 120.813 111.581 1.00 29.15 O
TER
Atoms:
OP1: (53.350,114.688,106.413)
OP2: (53.674,114.429,108.935)
C3': (50.633,117.598,105.518)
C1': (52.622,118.402,106.464)
C5': (50.702,115.543,106.954)
O6: (58.382,119.104,107.988)
O4': (52.040,117.560,107.443)
C8: (54.984,118.105,105.601)
C2: (55.331,119.420,109.761)
C6: (57.169,119.056,108.188)
C5: (56.141,118.701,107.279)
C4: (54.828,118.765,107.694)
P: (52.839,114.254,107.730)
C4': (50.764,117.053,106.934)
C2': (52.083,117.865,105.139)
O2': (52.268,118.785,104.086)
N1: (56.659,119.398,109.434)
N2: (55.046,119.772,111.024)
N3: (54.351,119.116,108.910)
N7: (56.223,118.274,105.964)
N9: (54.081,118.406,106.591)
O5': (51.474,115.016,108.027)
O3': (49.907,118.802,105.541)
OP2: (53.674,114.429,108.935)
C3': (50.633,117.598,105.518)
C1': (52.622,118.402,106.464)
C5': (50.702,115.543,106.954)
O6: (58.382,119.104,107.988)
O4': (52.040,117.560,107.443)
C8: (54.984,118.105,105.601)
C2: (55.331,119.420,109.761)
C6: (57.169,119.056,108.188)
C5: (56.141,118.701,107.279)
C4: (54.828,118.765,107.694)
P: (52.839,114.254,107.730)
C4': (50.764,117.053,106.934)
C2': (52.083,117.865,105.139)
O2': (52.268,118.785,104.086)
N1: (56.659,119.398,109.434)
N2: (55.046,119.772,111.024)
N3: (54.351,119.116,108.910)
N7: (56.223,118.274,105.964)
N9: (54.081,118.406,106.591)
O5': (51.474,115.016,108.027)
O3': (49.907,118.802,105.541)
C4: (55.528,122.374,107.161)
N3: (56.793,122.136,106.659)
OP1: (57.098,125.218,113.723)
OP2: (56.013,123.239,112.541)
C2: (57.960,122.049,107.372)
C1': (58.996,121.936,109.590)
C3': (60.591,122.399,111.227)
O5': (58.433,123.249,112.959)
O4': (58.588,121.219,110.732)
C5': (58.813,121.868,113.054)
P: (57.021,123.762,113.479)
C4': (59.547,121.439,111.800)
C2': (59.800,123.111,110.132)
O2': (60.617,123.663,109.118)
N1: (57.817,122.190,108.750)
O4: (54.554,122.217,106.426)
O2: (59.031,121.871,106.828)
C6: (56.597,122.501,109.302)
C5: (55.481,122.598,108.573)
O3': (61.600,121.619,110.595)
N3: (56.793,122.136,106.659)
OP1: (57.098,125.218,113.723)
OP2: (56.013,123.239,112.541)
C2: (57.960,122.049,107.372)
C1': (58.996,121.936,109.590)
C3': (60.591,122.399,111.227)
O5': (58.433,123.249,112.959)
O4': (58.588,121.219,110.732)
C5': (58.813,121.868,113.054)
P: (57.021,123.762,113.479)
C4': (59.547,121.439,111.800)
C2': (59.800,123.111,110.132)
O2': (60.617,123.663,109.118)
N1: (57.817,122.190,108.750)
O4: (54.554,122.217,106.426)
O2: (59.031,121.871,106.828)
C6: (56.597,122.501,109.302)
C5: (55.481,122.598,108.573)
O3': (61.600,121.619,110.595)
Image (generated by PyMOL):