Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02103:02088
Extra
PDB:
ATOM 1 O3' G A2102 124.085 115.902 43.935 1.00 81.46 O
ATOM 2 P G A2103 124.249 114.416 43.342 1.00 82.61 P
ATOM 3 OP1 G A2103 123.874 113.455 44.413 1.00 82.50 O
ATOM 4 OP2 G A2103 125.587 114.315 42.704 1.00 83.46 O
ATOM 5 O5' G A2103 123.156 114.325 42.183 1.00 80.70 O
ATOM 6 C5' G A2103 121.750 114.269 42.490 1.00 78.33 C
ATOM 7 C4' G A2103 120.948 113.970 41.247 1.00 76.74 C
ATOM 8 O4' G A2103 121.022 115.065 40.300 1.00 77.43 O
ATOM 9 C3' G A2103 121.415 112.768 40.458 1.00 75.41 C
ATOM 10 O3' G A2103 120.920 111.588 41.055 1.00 74.09 O
ATOM 11 C2' G A2103 120.819 113.030 39.083 1.00 77.10 C
ATOM 12 O2' G A2103 119.445 112.711 39.007 1.00 75.60 O
ATOM 13 C1' G A2103 120.968 114.550 38.976 1.00 78.78 C
ATOM 14 N9 G A2103 122.162 114.990 38.255 1.00 82.14 N
ATOM 15 C8 G A2103 123.405 115.243 38.788 1.00 83.12 C
ATOM 16 N7 G A2103 124.266 115.671 37.903 1.00 84.43 N
ATOM 17 C5 G A2103 123.555 115.693 36.710 1.00 84.42 C
ATOM 18 C6 G A2103 123.959 116.083 35.401 1.00 84.84 C
ATOM 19 O6 G A2103 125.060 116.514 35.027 1.00 85.31 O
ATOM 20 N1 G A2103 122.924 115.941 34.483 1.00 84.40 N
ATOM 21 C2 G A2103 121.662 115.493 34.778 1.00 82.80 C
ATOM 22 N2 G A2103 120.811 115.430 33.752 1.00 81.63 N
ATOM 23 N3 G A2103 121.268 115.134 35.990 1.00 83.23 N
ATOM 24 C4 G A2103 122.259 115.259 36.903 1.00 83.39 C
ATOM 25 P A A2104 121.759 110.232 40.941 1.00 74.95 P
ATOM 26 OP1 A A2104 121.192 109.275 41.932 1.00 74.52 O
ATOM 27 OP2 A A2104 123.203 110.591 41.008 1.00 76.27 O
ATOM 28 O5' A A2104 121.429 109.713 39.470 1.00 73.01 O
TER
ATOM 1 O3' C B2087 129.684 112.938 32.934 1.00 90.67 O
ATOM 2 P U B2088 129.036 114.414 32.957 1.00 88.85 P
ATOM 3 OP1 U B2088 129.913 115.344 32.202 1.00 88.87 O
ATOM 4 OP2 U B2088 128.675 114.732 34.365 1.00 88.66 O
ATOM 5 O5' U B2088 127.705 114.255 32.104 1.00 86.42 O
ATOM 6 C5' U B2088 127.759 113.884 30.716 1.00 82.71 C
ATOM 7 C4' U B2088 126.377 113.938 30.116 1.00 80.88 C
ATOM 8 O4' U B2088 125.505 113.041 30.865 1.00 80.65 O
ATOM 9 C3' U B2088 125.694 115.304 30.155 1.00 79.09 C
ATOM 10 O3' U B2088 124.811 115.350 29.040 1.00 77.14 O
ATOM 11 C2' U B2088 124.917 115.234 31.467 1.00 78.62 C
ATOM 12 O2' U B2088 123.819 116.113 31.554 1.00 77.91 O
ATOM 13 C1' U B2088 124.443 113.783 31.438 1.00 79.92 C
ATOM 14 N1 U B2088 124.111 113.208 32.752 1.00 80.15 N
ATOM 15 C2 U B2088 122.801 112.813 32.965 1.00 79.94 C
ATOM 16 O2 U B2088 121.925 112.926 32.122 1.00 79.49 O
ATOM 17 N3 U B2088 122.553 112.277 34.202 1.00 80.34 N
ATOM 18 C4 U B2088 123.456 112.100 35.229 1.00 81.70 C
ATOM 19 O4 U B2088 123.075 111.602 36.291 1.00 82.60 O
ATOM 20 C5 U B2088 124.787 112.534 34.936 1.00 81.10 C
ATOM 21 C6 U B2088 125.063 113.060 33.740 1.00 80.56 C
ATOM 22 P C B2089 124.240 116.755 28.506 1.00 76.52 P
ATOM 23 OP1 C B2089 125.145 117.258 27.448 1.00 77.23 O
ATOM 24 OP2 C B2089 123.927 117.622 29.668 1.00 76.71 O
ATOM 25 O5' C B2089 122.881 116.296 27.811 1.00 76.19 O
TER
ATOM 2 P G A2103 124.249 114.416 43.342 1.00 82.61 P
ATOM 3 OP1 G A2103 123.874 113.455 44.413 1.00 82.50 O
ATOM 4 OP2 G A2103 125.587 114.315 42.704 1.00 83.46 O
ATOM 5 O5' G A2103 123.156 114.325 42.183 1.00 80.70 O
ATOM 6 C5' G A2103 121.750 114.269 42.490 1.00 78.33 C
ATOM 7 C4' G A2103 120.948 113.970 41.247 1.00 76.74 C
ATOM 8 O4' G A2103 121.022 115.065 40.300 1.00 77.43 O
ATOM 9 C3' G A2103 121.415 112.768 40.458 1.00 75.41 C
ATOM 10 O3' G A2103 120.920 111.588 41.055 1.00 74.09 O
ATOM 11 C2' G A2103 120.819 113.030 39.083 1.00 77.10 C
ATOM 12 O2' G A2103 119.445 112.711 39.007 1.00 75.60 O
ATOM 13 C1' G A2103 120.968 114.550 38.976 1.00 78.78 C
ATOM 14 N9 G A2103 122.162 114.990 38.255 1.00 82.14 N
ATOM 15 C8 G A2103 123.405 115.243 38.788 1.00 83.12 C
ATOM 16 N7 G A2103 124.266 115.671 37.903 1.00 84.43 N
ATOM 17 C5 G A2103 123.555 115.693 36.710 1.00 84.42 C
ATOM 18 C6 G A2103 123.959 116.083 35.401 1.00 84.84 C
ATOM 19 O6 G A2103 125.060 116.514 35.027 1.00 85.31 O
ATOM 20 N1 G A2103 122.924 115.941 34.483 1.00 84.40 N
ATOM 21 C2 G A2103 121.662 115.493 34.778 1.00 82.80 C
ATOM 22 N2 G A2103 120.811 115.430 33.752 1.00 81.63 N
ATOM 23 N3 G A2103 121.268 115.134 35.990 1.00 83.23 N
ATOM 24 C4 G A2103 122.259 115.259 36.903 1.00 83.39 C
ATOM 25 P A A2104 121.759 110.232 40.941 1.00 74.95 P
ATOM 26 OP1 A A2104 121.192 109.275 41.932 1.00 74.52 O
ATOM 27 OP2 A A2104 123.203 110.591 41.008 1.00 76.27 O
ATOM 28 O5' A A2104 121.429 109.713 39.470 1.00 73.01 O
TER
ATOM 1 O3' C B2087 129.684 112.938 32.934 1.00 90.67 O
ATOM 2 P U B2088 129.036 114.414 32.957 1.00 88.85 P
ATOM 3 OP1 U B2088 129.913 115.344 32.202 1.00 88.87 O
ATOM 4 OP2 U B2088 128.675 114.732 34.365 1.00 88.66 O
ATOM 5 O5' U B2088 127.705 114.255 32.104 1.00 86.42 O
ATOM 6 C5' U B2088 127.759 113.884 30.716 1.00 82.71 C
ATOM 7 C4' U B2088 126.377 113.938 30.116 1.00 80.88 C
ATOM 8 O4' U B2088 125.505 113.041 30.865 1.00 80.65 O
ATOM 9 C3' U B2088 125.694 115.304 30.155 1.00 79.09 C
ATOM 10 O3' U B2088 124.811 115.350 29.040 1.00 77.14 O
ATOM 11 C2' U B2088 124.917 115.234 31.467 1.00 78.62 C
ATOM 12 O2' U B2088 123.819 116.113 31.554 1.00 77.91 O
ATOM 13 C1' U B2088 124.443 113.783 31.438 1.00 79.92 C
ATOM 14 N1 U B2088 124.111 113.208 32.752 1.00 80.15 N
ATOM 15 C2 U B2088 122.801 112.813 32.965 1.00 79.94 C
ATOM 16 O2 U B2088 121.925 112.926 32.122 1.00 79.49 O
ATOM 17 N3 U B2088 122.553 112.277 34.202 1.00 80.34 N
ATOM 18 C4 U B2088 123.456 112.100 35.229 1.00 81.70 C
ATOM 19 O4 U B2088 123.075 111.602 36.291 1.00 82.60 O
ATOM 20 C5 U B2088 124.787 112.534 34.936 1.00 81.10 C
ATOM 21 C6 U B2088 125.063 113.060 33.740 1.00 80.56 C
ATOM 22 P C B2089 124.240 116.755 28.506 1.00 76.52 P
ATOM 23 OP1 C B2089 125.145 117.258 27.448 1.00 77.23 O
ATOM 24 OP2 C B2089 123.927 117.622 29.668 1.00 76.71 O
ATOM 25 O5' C B2089 122.881 116.296 27.811 1.00 76.19 O
TER
Atoms:
OP1: (123.874,113.455,44.413)
OP2: (125.587,114.315,42.704)
C3': (121.415,112.768,40.458)
C1': (120.968,114.550,38.976)
C5': (121.750,114.269,42.490)
O6: (125.060,116.514,35.027)
O4': (121.022,115.065,40.300)
C8: (123.405,115.243,38.788)
C2: (121.662,115.493,34.778)
C6: (123.959,116.083,35.401)
C5: (123.555,115.693,36.710)
C4: (122.259,115.259,36.903)
P: (124.249,114.416,43.342)
C4': (120.948,113.970,41.247)
C2': (120.819,113.030,39.083)
O2': (119.445,112.711,39.007)
N1: (122.924,115.941,34.483)
N2: (120.811,115.430,33.752)
N3: (121.268,115.134,35.990)
N7: (124.266,115.671,37.903)
N9: (122.162,114.990,38.255)
O5': (123.156,114.325,42.183)
O3': (120.920,111.588,41.055)
OP2: (125.587,114.315,42.704)
C3': (121.415,112.768,40.458)
C1': (120.968,114.550,38.976)
C5': (121.750,114.269,42.490)
O6: (125.060,116.514,35.027)
O4': (121.022,115.065,40.300)
C8: (123.405,115.243,38.788)
C2: (121.662,115.493,34.778)
C6: (123.959,116.083,35.401)
C5: (123.555,115.693,36.710)
C4: (122.259,115.259,36.903)
P: (124.249,114.416,43.342)
C4': (120.948,113.970,41.247)
C2': (120.819,113.030,39.083)
O2': (119.445,112.711,39.007)
N1: (122.924,115.941,34.483)
N2: (120.811,115.430,33.752)
N3: (121.268,115.134,35.990)
N7: (124.266,115.671,37.903)
N9: (122.162,114.990,38.255)
O5': (123.156,114.325,42.183)
O3': (120.920,111.588,41.055)
C4: (123.456,112.100,35.229)
N3: (122.553,112.277,34.202)
OP1: (129.913,115.344,32.202)
OP2: (128.675,114.732,34.365)
C2: (122.801,112.813,32.965)
C1': (124.443,113.783,31.438)
C3': (125.694,115.304,30.155)
O5': (127.705,114.255,32.104)
O4': (125.505,113.041,30.865)
C5': (127.759,113.884,30.716)
P: (129.036,114.414,32.957)
C4': (126.377,113.938,30.116)
C2': (124.917,115.234,31.467)
O2': (123.819,116.113,31.554)
N1: (124.111,113.208,32.752)
O4: (123.075,111.602,36.291)
O2: (121.925,112.926,32.122)
C6: (125.063,113.060,33.740)
C5: (124.787,112.534,34.936)
O3': (124.811,115.350,29.040)
N3: (122.553,112.277,34.202)
OP1: (129.913,115.344,32.202)
OP2: (128.675,114.732,34.365)
C2: (122.801,112.813,32.965)
C1': (124.443,113.783,31.438)
C3': (125.694,115.304,30.155)
O5': (127.705,114.255,32.104)
O4': (125.505,113.041,30.865)
C5': (127.759,113.884,30.716)
P: (129.036,114.414,32.957)
C4': (126.377,113.938,30.116)
C2': (124.917,115.234,31.467)
O2': (123.819,116.113,31.554)
N1: (124.111,113.208,32.752)
O4: (123.075,111.602,36.291)
O2: (121.925,112.926,32.122)
C6: (125.063,113.060,33.740)
C5: (124.787,112.534,34.936)
O3': (124.811,115.350,29.040)
Image (generated by PyMOL):