Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02019:02448
Extra
PDB:
ATOM 1 O3' G A2018 52.633 112.530 107.484 1.00 43.62 O
ATOM 2 P G A2019 52.988 114.095 107.558 1.00 43.10 P
ATOM 3 OP1 G A2019 53.471 114.547 106.228 1.00 41.47 O
ATOM 4 OP2 G A2019 53.838 114.287 108.754 1.00 46.28 O
ATOM 5 O5' G A2019 51.609 114.815 107.893 1.00 40.74 O
ATOM 6 C5' G A2019 50.804 115.343 106.842 1.00 38.46 C
ATOM 7 C4' G A2019 50.867 116.850 106.825 1.00 34.24 C
ATOM 8 O4' G A2019 52.140 117.339 107.352 1.00 36.33 O
ATOM 9 C3' G A2019 50.750 117.412 105.414 1.00 32.36 C
ATOM 10 O3' G A2019 50.016 118.620 105.449 1.00 30.41 O
ATOM 11 C2' G A2019 52.211 117.664 105.052 1.00 32.76 C
ATOM 12 O2' G A2019 52.445 118.591 104.015 1.00 29.78 O
ATOM 13 C1' G A2019 52.745 118.176 106.387 1.00 34.70 C
ATOM 14 N9 G A2019 54.201 118.161 106.536 1.00 33.43 N
ATOM 15 C8 G A2019 55.115 117.865 105.558 1.00 33.47 C
ATOM 16 N7 G A2019 56.350 118.034 105.938 1.00 33.59 N
ATOM 17 C5 G A2019 56.251 118.444 107.256 1.00 34.09 C
ATOM 18 C6 G A2019 57.267 118.787 108.183 1.00 34.17 C
ATOM 19 O6 G A2019 58.486 118.820 108.006 1.00 33.30 O
ATOM 20 N1 G A2019 56.739 119.129 109.423 1.00 33.29 N
ATOM 21 C2 G A2019 55.405 119.148 109.729 1.00 33.78 C
ATOM 22 N2 G A2019 55.109 119.497 110.984 1.00 32.04 N
ATOM 23 N3 G A2019 54.437 118.843 108.865 1.00 34.81 N
ATOM 24 C4 G A2019 54.932 118.502 107.654 1.00 33.85 C
ATOM 25 P A A2020 48.447 118.599 105.117 1.00 29.42 P
ATOM 26 OP1 A A2020 47.766 118.116 106.351 1.00 28.13 O
ATOM 27 OP2 A A2020 48.216 117.903 103.830 1.00 30.32 O
ATOM 28 O5' A A2020 48.079 120.125 104.877 1.00 29.14 O
TER
ATOM 1 O3' G B2447 56.903 122.780 114.789 1.00 26.34 O
ATOM 2 P U B2448 57.166 123.539 113.398 1.00 29.06 P
ATOM 3 OP1 U B2448 57.268 124.988 113.657 1.00 29.41 O
ATOM 4 OP2 U B2448 56.150 123.044 112.443 1.00 30.59 O
ATOM 5 O5' U B2448 58.570 122.999 112.884 1.00 27.25 O
ATOM 6 C5' U B2448 58.895 121.603 112.948 1.00 27.72 C
ATOM 7 C4' U B2448 59.627 121.173 111.696 1.00 29.27 C
ATOM 8 O4' U B2448 58.684 120.922 110.620 1.00 30.20 O
ATOM 9 C3' U B2448 60.659 122.145 111.127 1.00 29.06 C
ATOM 10 O3' U B2448 61.681 121.362 110.519 1.00 27.99 O
ATOM 11 C2' U B2448 59.866 122.837 110.022 1.00 30.93 C
ATOM 12 O2' U B2448 60.675 123.390 109.002 1.00 32.87 O
ATOM 13 C1' U B2448 59.091 121.643 109.478 1.00 31.32 C
ATOM 14 N1 U B2448 57.927 121.883 108.612 1.00 32.09 N
ATOM 15 C2 U B2448 58.102 121.721 107.242 1.00 30.64 C
ATOM 16 O2 U B2448 59.182 121.513 106.726 1.00 26.91 O
ATOM 17 N3 U B2448 56.957 121.819 106.501 1.00 31.93 N
ATOM 18 C4 U B2448 55.687 122.080 106.966 1.00 34.22 C
ATOM 19 O4 U B2448 54.735 121.971 106.197 1.00 36.89 O
ATOM 20 C5 U B2448 55.602 122.310 108.376 1.00 34.27 C
ATOM 21 C6 U B2448 56.697 122.208 109.133 1.00 32.42 C
ATOM 22 P C B2449 63.214 121.811 110.626 1.00 28.45 P
ATOM 23 OP1 C B2449 63.295 123.056 111.429 1.00 27.70 O
ATOM 24 OP2 C B2449 63.782 121.789 109.264 1.00 26.17 O
ATOM 25 O5' C B2449 63.879 120.626 111.454 1.00 29.88 O
TER
ATOM 2 P G A2019 52.988 114.095 107.558 1.00 43.10 P
ATOM 3 OP1 G A2019 53.471 114.547 106.228 1.00 41.47 O
ATOM 4 OP2 G A2019 53.838 114.287 108.754 1.00 46.28 O
ATOM 5 O5' G A2019 51.609 114.815 107.893 1.00 40.74 O
ATOM 6 C5' G A2019 50.804 115.343 106.842 1.00 38.46 C
ATOM 7 C4' G A2019 50.867 116.850 106.825 1.00 34.24 C
ATOM 8 O4' G A2019 52.140 117.339 107.352 1.00 36.33 O
ATOM 9 C3' G A2019 50.750 117.412 105.414 1.00 32.36 C
ATOM 10 O3' G A2019 50.016 118.620 105.449 1.00 30.41 O
ATOM 11 C2' G A2019 52.211 117.664 105.052 1.00 32.76 C
ATOM 12 O2' G A2019 52.445 118.591 104.015 1.00 29.78 O
ATOM 13 C1' G A2019 52.745 118.176 106.387 1.00 34.70 C
ATOM 14 N9 G A2019 54.201 118.161 106.536 1.00 33.43 N
ATOM 15 C8 G A2019 55.115 117.865 105.558 1.00 33.47 C
ATOM 16 N7 G A2019 56.350 118.034 105.938 1.00 33.59 N
ATOM 17 C5 G A2019 56.251 118.444 107.256 1.00 34.09 C
ATOM 18 C6 G A2019 57.267 118.787 108.183 1.00 34.17 C
ATOM 19 O6 G A2019 58.486 118.820 108.006 1.00 33.30 O
ATOM 20 N1 G A2019 56.739 119.129 109.423 1.00 33.29 N
ATOM 21 C2 G A2019 55.405 119.148 109.729 1.00 33.78 C
ATOM 22 N2 G A2019 55.109 119.497 110.984 1.00 32.04 N
ATOM 23 N3 G A2019 54.437 118.843 108.865 1.00 34.81 N
ATOM 24 C4 G A2019 54.932 118.502 107.654 1.00 33.85 C
ATOM 25 P A A2020 48.447 118.599 105.117 1.00 29.42 P
ATOM 26 OP1 A A2020 47.766 118.116 106.351 1.00 28.13 O
ATOM 27 OP2 A A2020 48.216 117.903 103.830 1.00 30.32 O
ATOM 28 O5' A A2020 48.079 120.125 104.877 1.00 29.14 O
TER
ATOM 1 O3' G B2447 56.903 122.780 114.789 1.00 26.34 O
ATOM 2 P U B2448 57.166 123.539 113.398 1.00 29.06 P
ATOM 3 OP1 U B2448 57.268 124.988 113.657 1.00 29.41 O
ATOM 4 OP2 U B2448 56.150 123.044 112.443 1.00 30.59 O
ATOM 5 O5' U B2448 58.570 122.999 112.884 1.00 27.25 O
ATOM 6 C5' U B2448 58.895 121.603 112.948 1.00 27.72 C
ATOM 7 C4' U B2448 59.627 121.173 111.696 1.00 29.27 C
ATOM 8 O4' U B2448 58.684 120.922 110.620 1.00 30.20 O
ATOM 9 C3' U B2448 60.659 122.145 111.127 1.00 29.06 C
ATOM 10 O3' U B2448 61.681 121.362 110.519 1.00 27.99 O
ATOM 11 C2' U B2448 59.866 122.837 110.022 1.00 30.93 C
ATOM 12 O2' U B2448 60.675 123.390 109.002 1.00 32.87 O
ATOM 13 C1' U B2448 59.091 121.643 109.478 1.00 31.32 C
ATOM 14 N1 U B2448 57.927 121.883 108.612 1.00 32.09 N
ATOM 15 C2 U B2448 58.102 121.721 107.242 1.00 30.64 C
ATOM 16 O2 U B2448 59.182 121.513 106.726 1.00 26.91 O
ATOM 17 N3 U B2448 56.957 121.819 106.501 1.00 31.93 N
ATOM 18 C4 U B2448 55.687 122.080 106.966 1.00 34.22 C
ATOM 19 O4 U B2448 54.735 121.971 106.197 1.00 36.89 O
ATOM 20 C5 U B2448 55.602 122.310 108.376 1.00 34.27 C
ATOM 21 C6 U B2448 56.697 122.208 109.133 1.00 32.42 C
ATOM 22 P C B2449 63.214 121.811 110.626 1.00 28.45 P
ATOM 23 OP1 C B2449 63.295 123.056 111.429 1.00 27.70 O
ATOM 24 OP2 C B2449 63.782 121.789 109.264 1.00 26.17 O
ATOM 25 O5' C B2449 63.879 120.626 111.454 1.00 29.88 O
TER
Atoms:
OP1: (53.471,114.547,106.228)
OP2: (53.838,114.287,108.754)
C3': (50.750,117.412,105.414)
C1': (52.745,118.176,106.387)
C5': (50.804,115.343,106.842)
O6: (58.486,118.820,108.006)
O4': (52.140,117.339,107.352)
C8: (55.115,117.865,105.558)
C2: (55.405,119.148,109.729)
C6: (57.267,118.787,108.183)
C5: (56.251,118.444,107.256)
C4: (54.932,118.502,107.654)
P: (52.988,114.095,107.558)
C4': (50.867,116.850,106.825)
C2': (52.211,117.664,105.052)
O2': (52.445,118.591,104.015)
N1: (56.739,119.129,109.423)
N2: (55.109,119.497,110.984)
N3: (54.437,118.843,108.865)
N7: (56.350,118.034,105.938)
N9: (54.201,118.161,106.536)
O5': (51.609,114.815,107.893)
O3': (50.016,118.620,105.449)
OP2: (53.838,114.287,108.754)
C3': (50.750,117.412,105.414)
C1': (52.745,118.176,106.387)
C5': (50.804,115.343,106.842)
O6: (58.486,118.820,108.006)
O4': (52.140,117.339,107.352)
C8: (55.115,117.865,105.558)
C2: (55.405,119.148,109.729)
C6: (57.267,118.787,108.183)
C5: (56.251,118.444,107.256)
C4: (54.932,118.502,107.654)
P: (52.988,114.095,107.558)
C4': (50.867,116.850,106.825)
C2': (52.211,117.664,105.052)
O2': (52.445,118.591,104.015)
N1: (56.739,119.129,109.423)
N2: (55.109,119.497,110.984)
N3: (54.437,118.843,108.865)
N7: (56.350,118.034,105.938)
N9: (54.201,118.161,106.536)
O5': (51.609,114.815,107.893)
O3': (50.016,118.620,105.449)
C4: (55.687,122.080,106.966)
N3: (56.957,121.819,106.501)
OP1: (57.268,124.988,113.657)
OP2: (56.150,123.044,112.443)
C2: (58.102,121.721,107.242)
C1': (59.091,121.643,109.478)
C3': (60.659,122.145,111.127)
O5': (58.570,122.999,112.884)
O4': (58.684,120.922,110.620)
C5': (58.895,121.603,112.948)
P: (57.166,123.539,113.398)
C4': (59.627,121.173,111.696)
C2': (59.866,122.837,110.022)
O2': (60.675,123.390,109.002)
N1: (57.927,121.883,108.612)
O4: (54.735,121.971,106.197)
O2: (59.182,121.513,106.726)
C6: (56.697,122.208,109.133)
C5: (55.602,122.310,108.376)
O3': (61.681,121.362,110.519)
N3: (56.957,121.819,106.501)
OP1: (57.268,124.988,113.657)
OP2: (56.150,123.044,112.443)
C2: (58.102,121.721,107.242)
C1': (59.091,121.643,109.478)
C3': (60.659,122.145,111.127)
O5': (58.570,122.999,112.884)
O4': (58.684,120.922,110.620)
C5': (58.895,121.603,112.948)
P: (57.166,123.539,113.398)
C4': (59.627,121.173,111.696)
C2': (59.866,122.837,110.022)
O2': (60.675,123.390,109.002)
N1: (57.927,121.883,108.612)
O4: (54.735,121.971,106.197)
O2: (59.182,121.513,106.726)
C6: (56.697,122.208,109.133)
C5: (55.602,122.310,108.376)
O3': (61.681,121.362,110.519)
Image (generated by PyMOL):