Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02103:02088
Extra
PDB:
ATOM 1 O3' G A2102 124.114 115.756 43.766 1.00 79.71 O
ATOM 2 P G A2103 124.324 114.264 43.206 1.00 80.21 P
ATOM 3 OP1 G A2103 124.000 113.308 44.298 1.00 80.67 O
ATOM 4 OP2 G A2103 125.653 114.201 42.548 1.00 81.10 O
ATOM 5 O5' G A2103 123.225 114.109 42.061 1.00 79.09 O
ATOM 6 C5' G A2103 121.820 114.066 42.374 1.00 75.23 C
ATOM 7 C4' G A2103 121.013 113.785 41.130 1.00 72.79 C
ATOM 8 O4' G A2103 121.120 114.880 40.187 1.00 73.36 O
ATOM 9 C3' G A2103 121.471 112.579 40.342 1.00 71.15 C
ATOM 10 O3' G A2103 120.944 111.407 40.920 1.00 70.17 O
ATOM 11 C2' G A2103 120.905 112.854 38.959 1.00 72.40 C
ATOM 12 O2' G A2103 119.530 112.557 38.853 1.00 71.25 O
ATOM 13 C1' G A2103 121.083 114.369 38.863 1.00 74.20 C
ATOM 14 N9 G A2103 122.304 114.775 38.173 1.00 77.13 N
ATOM 15 C8 G A2103 123.549 114.970 38.724 1.00 78.47 C
ATOM 16 N7 G A2103 124.436 115.378 37.857 1.00 79.54 N
ATOM 17 C5 G A2103 123.738 115.449 36.658 1.00 79.33 C
ATOM 18 C6 G A2103 124.168 115.844 35.367 1.00 79.39 C
ATOM 19 O6 G A2103 125.286 116.239 35.014 1.00 80.27 O
ATOM 20 N1 G A2103 123.138 115.756 34.436 1.00 78.55 N
ATOM 21 C2 G A2103 121.858 115.351 34.711 1.00 76.88 C
ATOM 22 N2 G A2103 121.014 115.335 33.677 1.00 75.95 N
ATOM 23 N3 G A2103 121.440 114.991 35.910 1.00 77.65 N
ATOM 24 C4 G A2103 122.425 115.063 36.831 1.00 78.24 C
ATOM 25 P A A2104 121.788 110.054 40.863 1.00 70.37 P
ATOM 26 OP1 A A2104 121.245 109.148 41.910 1.00 70.89 O
ATOM 27 OP2 A A2104 123.222 110.436 40.894 1.00 71.89 O
ATOM 28 O5' A A2104 121.441 109.461 39.425 1.00 69.20 O
TER
ATOM 1 O3' C B2087 129.666 112.619 32.810 1.00 84.85 O
ATOM 2 P U B2088 129.074 114.120 32.823 1.00 82.66 P
ATOM 3 OP1 U B2088 129.957 114.997 32.013 1.00 82.71 O
ATOM 4 OP2 U B2088 128.778 114.486 34.235 1.00 82.31 O
ATOM 5 O5' U B2088 127.710 113.998 32.016 1.00 80.61 O
ATOM 6 C5' U B2088 127.709 113.640 30.622 1.00 77.42 C
ATOM 7 C4' U B2088 126.312 113.748 30.058 1.00 75.45 C
ATOM 8 O4' U B2088 125.430 112.861 30.804 1.00 75.40 O
ATOM 9 C3' U B2088 125.667 115.129 30.129 1.00 73.61 C
ATOM 10 O3' U B2088 124.768 115.210 29.032 1.00 71.18 O
ATOM 11 C2' U B2088 124.908 115.062 31.450 1.00 73.32 C
ATOM 12 O2' U B2088 123.827 115.964 31.542 1.00 71.98 O
ATOM 13 C1' U B2088 124.408 113.618 31.429 1.00 74.93 C
ATOM 14 N1 U B2088 124.140 113.042 32.758 1.00 75.80 N
ATOM 15 C2 U B2088 122.833 112.683 33.059 1.00 75.83 C
ATOM 16 O2 U B2088 121.905 112.815 32.278 1.00 74.93 O
ATOM 17 N3 U B2088 122.654 112.159 34.314 1.00 76.39 N
ATOM 18 C4 U B2088 123.619 111.956 35.278 1.00 77.49 C
ATOM 19 O4 U B2088 123.296 111.491 36.373 1.00 77.79 O
ATOM 20 C5 U B2088 124.940 112.345 34.891 1.00 76.87 C
ATOM 21 C6 U B2088 125.150 112.861 33.678 1.00 75.82 C
ATOM 22 P C B2089 124.272 116.636 28.481 1.00 69.68 P
ATOM 23 OP1 C B2089 125.234 117.097 27.460 1.00 70.83 O
ATOM 24 OP2 C B2089 123.955 117.522 29.628 1.00 69.95 O
ATOM 25 O5' C B2089 122.926 116.217 27.734 1.00 69.53 O
TER
ATOM 2 P G A2103 124.324 114.264 43.206 1.00 80.21 P
ATOM 3 OP1 G A2103 124.000 113.308 44.298 1.00 80.67 O
ATOM 4 OP2 G A2103 125.653 114.201 42.548 1.00 81.10 O
ATOM 5 O5' G A2103 123.225 114.109 42.061 1.00 79.09 O
ATOM 6 C5' G A2103 121.820 114.066 42.374 1.00 75.23 C
ATOM 7 C4' G A2103 121.013 113.785 41.130 1.00 72.79 C
ATOM 8 O4' G A2103 121.120 114.880 40.187 1.00 73.36 O
ATOM 9 C3' G A2103 121.471 112.579 40.342 1.00 71.15 C
ATOM 10 O3' G A2103 120.944 111.407 40.920 1.00 70.17 O
ATOM 11 C2' G A2103 120.905 112.854 38.959 1.00 72.40 C
ATOM 12 O2' G A2103 119.530 112.557 38.853 1.00 71.25 O
ATOM 13 C1' G A2103 121.083 114.369 38.863 1.00 74.20 C
ATOM 14 N9 G A2103 122.304 114.775 38.173 1.00 77.13 N
ATOM 15 C8 G A2103 123.549 114.970 38.724 1.00 78.47 C
ATOM 16 N7 G A2103 124.436 115.378 37.857 1.00 79.54 N
ATOM 17 C5 G A2103 123.738 115.449 36.658 1.00 79.33 C
ATOM 18 C6 G A2103 124.168 115.844 35.367 1.00 79.39 C
ATOM 19 O6 G A2103 125.286 116.239 35.014 1.00 80.27 O
ATOM 20 N1 G A2103 123.138 115.756 34.436 1.00 78.55 N
ATOM 21 C2 G A2103 121.858 115.351 34.711 1.00 76.88 C
ATOM 22 N2 G A2103 121.014 115.335 33.677 1.00 75.95 N
ATOM 23 N3 G A2103 121.440 114.991 35.910 1.00 77.65 N
ATOM 24 C4 G A2103 122.425 115.063 36.831 1.00 78.24 C
ATOM 25 P A A2104 121.788 110.054 40.863 1.00 70.37 P
ATOM 26 OP1 A A2104 121.245 109.148 41.910 1.00 70.89 O
ATOM 27 OP2 A A2104 123.222 110.436 40.894 1.00 71.89 O
ATOM 28 O5' A A2104 121.441 109.461 39.425 1.00 69.20 O
TER
ATOM 1 O3' C B2087 129.666 112.619 32.810 1.00 84.85 O
ATOM 2 P U B2088 129.074 114.120 32.823 1.00 82.66 P
ATOM 3 OP1 U B2088 129.957 114.997 32.013 1.00 82.71 O
ATOM 4 OP2 U B2088 128.778 114.486 34.235 1.00 82.31 O
ATOM 5 O5' U B2088 127.710 113.998 32.016 1.00 80.61 O
ATOM 6 C5' U B2088 127.709 113.640 30.622 1.00 77.42 C
ATOM 7 C4' U B2088 126.312 113.748 30.058 1.00 75.45 C
ATOM 8 O4' U B2088 125.430 112.861 30.804 1.00 75.40 O
ATOM 9 C3' U B2088 125.667 115.129 30.129 1.00 73.61 C
ATOM 10 O3' U B2088 124.768 115.210 29.032 1.00 71.18 O
ATOM 11 C2' U B2088 124.908 115.062 31.450 1.00 73.32 C
ATOM 12 O2' U B2088 123.827 115.964 31.542 1.00 71.98 O
ATOM 13 C1' U B2088 124.408 113.618 31.429 1.00 74.93 C
ATOM 14 N1 U B2088 124.140 113.042 32.758 1.00 75.80 N
ATOM 15 C2 U B2088 122.833 112.683 33.059 1.00 75.83 C
ATOM 16 O2 U B2088 121.905 112.815 32.278 1.00 74.93 O
ATOM 17 N3 U B2088 122.654 112.159 34.314 1.00 76.39 N
ATOM 18 C4 U B2088 123.619 111.956 35.278 1.00 77.49 C
ATOM 19 O4 U B2088 123.296 111.491 36.373 1.00 77.79 O
ATOM 20 C5 U B2088 124.940 112.345 34.891 1.00 76.87 C
ATOM 21 C6 U B2088 125.150 112.861 33.678 1.00 75.82 C
ATOM 22 P C B2089 124.272 116.636 28.481 1.00 69.68 P
ATOM 23 OP1 C B2089 125.234 117.097 27.460 1.00 70.83 O
ATOM 24 OP2 C B2089 123.955 117.522 29.628 1.00 69.95 O
ATOM 25 O5' C B2089 122.926 116.217 27.734 1.00 69.53 O
TER
Atoms:
OP1: (124.000,113.308,44.298)
OP2: (125.653,114.201,42.548)
C3': (121.471,112.579,40.342)
C1': (121.083,114.369,38.863)
C5': (121.820,114.066,42.374)
O6: (125.286,116.239,35.014)
O4': (121.120,114.880,40.187)
C8: (123.549,114.970,38.724)
C2: (121.858,115.351,34.711)
C6: (124.168,115.844,35.367)
C5: (123.738,115.449,36.658)
C4: (122.425,115.063,36.831)
P: (124.324,114.264,43.206)
C4': (121.013,113.785,41.130)
C2': (120.905,112.854,38.959)
O2': (119.530,112.557,38.853)
N1: (123.138,115.756,34.436)
N2: (121.014,115.335,33.677)
N3: (121.440,114.991,35.910)
N7: (124.436,115.378,37.857)
N9: (122.304,114.775,38.173)
O5': (123.225,114.109,42.061)
O3': (120.944,111.407,40.920)
OP2: (125.653,114.201,42.548)
C3': (121.471,112.579,40.342)
C1': (121.083,114.369,38.863)
C5': (121.820,114.066,42.374)
O6: (125.286,116.239,35.014)
O4': (121.120,114.880,40.187)
C8: (123.549,114.970,38.724)
C2: (121.858,115.351,34.711)
C6: (124.168,115.844,35.367)
C5: (123.738,115.449,36.658)
C4: (122.425,115.063,36.831)
P: (124.324,114.264,43.206)
C4': (121.013,113.785,41.130)
C2': (120.905,112.854,38.959)
O2': (119.530,112.557,38.853)
N1: (123.138,115.756,34.436)
N2: (121.014,115.335,33.677)
N3: (121.440,114.991,35.910)
N7: (124.436,115.378,37.857)
N9: (122.304,114.775,38.173)
O5': (123.225,114.109,42.061)
O3': (120.944,111.407,40.920)
C4: (123.619,111.956,35.278)
N3: (122.654,112.159,34.314)
OP1: (129.957,114.997,32.013)
OP2: (128.778,114.486,34.235)
C2: (122.833,112.683,33.059)
C1': (124.408,113.618,31.429)
C3': (125.667,115.129,30.129)
O5': (127.710,113.998,32.016)
O4': (125.430,112.861,30.804)
C5': (127.709,113.640,30.622)
P: (129.074,114.120,32.823)
C4': (126.312,113.748,30.058)
C2': (124.908,115.062,31.450)
O2': (123.827,115.964,31.542)
N1: (124.140,113.042,32.758)
O4: (123.296,111.491,36.373)
O2: (121.905,112.815,32.278)
C6: (125.150,112.861,33.678)
C5: (124.940,112.345,34.891)
O3': (124.768,115.210,29.032)
N3: (122.654,112.159,34.314)
OP1: (129.957,114.997,32.013)
OP2: (128.778,114.486,34.235)
C2: (122.833,112.683,33.059)
C1': (124.408,113.618,31.429)
C3': (125.667,115.129,30.129)
O5': (127.710,113.998,32.016)
O4': (125.430,112.861,30.804)
C5': (127.709,113.640,30.622)
P: (129.074,114.120,32.823)
C4': (126.312,113.748,30.058)
C2': (124.908,115.062,31.450)
O2': (123.827,115.964,31.542)
N1: (124.140,113.042,32.758)
O4: (123.296,111.491,36.373)
O2: (121.905,112.815,32.278)
C6: (125.150,112.861,33.678)
C5: (124.940,112.345,34.891)
O3': (124.768,115.210,29.032)
Image (generated by PyMOL):