Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02019:02448
Extra
PDB:
ATOM 1 O3' G A2018 52.700 112.824 107.994 1.00 47.87 O
ATOM 2 P G A2019 53.041 114.392 108.144 1.00 48.44 P
ATOM 3 OP1 G A2019 53.714 114.838 106.893 1.00 46.61 O
ATOM 4 OP2 G A2019 53.707 114.602 109.451 1.00 49.75 O
ATOM 5 O5' G A2019 51.629 115.114 108.286 1.00 46.37 O
ATOM 6 C5' G A2019 50.981 115.660 107.137 1.00 44.93 C
ATOM 7 C4' G A2019 50.988 117.167 107.185 1.00 41.29 C
ATOM 8 O4' G A2019 52.260 117.660 107.710 1.00 42.49 O
ATOM 9 C3' G A2019 50.839 117.787 105.801 1.00 39.80 C
ATOM 10 O3' G A2019 50.099 118.989 105.885 1.00 38.83 O
ATOM 11 C2' G A2019 52.287 118.079 105.426 1.00 40.23 C
ATOM 12 O2' G A2019 52.460 119.037 104.406 1.00 39.33 O
ATOM 13 C1' G A2019 52.828 118.553 106.772 1.00 41.13 C
ATOM 14 N9 G A2019 54.282 118.585 106.916 1.00 40.42 N
ATOM 15 C8 G A2019 55.204 118.359 105.926 1.00 41.52 C
ATOM 16 N7 G A2019 56.431 118.572 106.306 1.00 42.02 N
ATOM 17 C5 G A2019 56.321 118.939 107.638 1.00 42.19 C
ATOM 18 C6 G A2019 57.325 119.318 108.572 1.00 41.91 C
ATOM 19 O6 G A2019 58.538 119.426 108.390 1.00 40.69 O
ATOM 20 N1 G A2019 56.785 119.599 109.821 1.00 40.13 N
ATOM 21 C2 G A2019 55.457 119.539 110.134 1.00 39.40 C
ATOM 22 N2 G A2019 55.152 119.856 111.391 1.00 38.16 N
ATOM 23 N3 G A2019 54.502 119.198 109.272 1.00 41.51 N
ATOM 24 C4 G A2019 55.005 118.917 108.045 1.00 41.92 C
ATOM 25 P A A2020 48.572 119.003 105.413 1.00 39.17 P
ATOM 26 OP1 A A2020 47.782 118.378 106.503 1.00 38.18 O
ATOM 27 OP2 A A2020 48.513 118.441 104.055 1.00 41.92 O
ATOM 28 O5' A A2020 48.208 120.542 105.292 1.00 38.69 O
TER
ATOM 1 O3' G B2447 57.045 123.128 115.158 1.00 34.54 O
ATOM 2 P U B2448 57.235 123.971 113.799 1.00 35.87 P
ATOM 3 OP1 U B2448 57.402 125.393 114.130 1.00 35.95 O
ATOM 4 OP2 U B2448 56.150 123.560 112.897 1.00 37.28 O
ATOM 5 O5' U B2448 58.579 123.444 113.131 1.00 36.42 O
ATOM 6 C5' U B2448 58.992 122.072 113.260 1.00 36.85 C
ATOM 7 C4' U B2448 59.787 121.641 112.047 1.00 35.85 C
ATOM 8 O4' U B2448 58.892 121.333 110.950 1.00 38.51 O
ATOM 9 C3' U B2448 60.801 122.632 111.486 1.00 35.02 C
ATOM 10 O3' U B2448 61.826 121.860 110.875 1.00 34.90 O
ATOM 11 C2' U B2448 60.009 123.289 110.364 1.00 35.32 C
ATOM 12 O2' U B2448 60.842 123.824 109.363 1.00 34.81 O
ATOM 13 C1' U B2448 59.283 122.069 109.812 1.00 38.38 C
ATOM 14 N1 U B2448 58.107 122.291 108.957 1.00 42.26 N
ATOM 15 C2 U B2448 58.274 122.213 107.576 1.00 43.09 C
ATOM 16 O2 U B2448 59.354 122.072 107.030 1.00 41.10 O
ATOM 17 N3 U B2448 57.116 122.323 106.855 1.00 45.62 N
ATOM 18 C4 U B2448 55.846 122.529 107.345 1.00 45.98 C
ATOM 19 O4 U B2448 54.895 122.482 106.574 1.00 49.44 O
ATOM 20 C5 U B2448 55.765 122.661 108.762 1.00 44.99 C
ATOM 21 C6 U B2448 56.866 122.538 109.502 1.00 44.11 C
ATOM 22 P C B2449 63.362 122.283 111.021 1.00 34.49 P
ATOM 23 OP1 C B2449 63.451 123.530 111.808 1.00 35.41 O
ATOM 24 OP2 C B2449 63.973 122.232 109.681 1.00 33.08 O
ATOM 25 O5' C B2449 63.967 121.091 111.882 1.00 35.86 O
TER
ATOM 2 P G A2019 53.041 114.392 108.144 1.00 48.44 P
ATOM 3 OP1 G A2019 53.714 114.838 106.893 1.00 46.61 O
ATOM 4 OP2 G A2019 53.707 114.602 109.451 1.00 49.75 O
ATOM 5 O5' G A2019 51.629 115.114 108.286 1.00 46.37 O
ATOM 6 C5' G A2019 50.981 115.660 107.137 1.00 44.93 C
ATOM 7 C4' G A2019 50.988 117.167 107.185 1.00 41.29 C
ATOM 8 O4' G A2019 52.260 117.660 107.710 1.00 42.49 O
ATOM 9 C3' G A2019 50.839 117.787 105.801 1.00 39.80 C
ATOM 10 O3' G A2019 50.099 118.989 105.885 1.00 38.83 O
ATOM 11 C2' G A2019 52.287 118.079 105.426 1.00 40.23 C
ATOM 12 O2' G A2019 52.460 119.037 104.406 1.00 39.33 O
ATOM 13 C1' G A2019 52.828 118.553 106.772 1.00 41.13 C
ATOM 14 N9 G A2019 54.282 118.585 106.916 1.00 40.42 N
ATOM 15 C8 G A2019 55.204 118.359 105.926 1.00 41.52 C
ATOM 16 N7 G A2019 56.431 118.572 106.306 1.00 42.02 N
ATOM 17 C5 G A2019 56.321 118.939 107.638 1.00 42.19 C
ATOM 18 C6 G A2019 57.325 119.318 108.572 1.00 41.91 C
ATOM 19 O6 G A2019 58.538 119.426 108.390 1.00 40.69 O
ATOM 20 N1 G A2019 56.785 119.599 109.821 1.00 40.13 N
ATOM 21 C2 G A2019 55.457 119.539 110.134 1.00 39.40 C
ATOM 22 N2 G A2019 55.152 119.856 111.391 1.00 38.16 N
ATOM 23 N3 G A2019 54.502 119.198 109.272 1.00 41.51 N
ATOM 24 C4 G A2019 55.005 118.917 108.045 1.00 41.92 C
ATOM 25 P A A2020 48.572 119.003 105.413 1.00 39.17 P
ATOM 26 OP1 A A2020 47.782 118.378 106.503 1.00 38.18 O
ATOM 27 OP2 A A2020 48.513 118.441 104.055 1.00 41.92 O
ATOM 28 O5' A A2020 48.208 120.542 105.292 1.00 38.69 O
TER
ATOM 1 O3' G B2447 57.045 123.128 115.158 1.00 34.54 O
ATOM 2 P U B2448 57.235 123.971 113.799 1.00 35.87 P
ATOM 3 OP1 U B2448 57.402 125.393 114.130 1.00 35.95 O
ATOM 4 OP2 U B2448 56.150 123.560 112.897 1.00 37.28 O
ATOM 5 O5' U B2448 58.579 123.444 113.131 1.00 36.42 O
ATOM 6 C5' U B2448 58.992 122.072 113.260 1.00 36.85 C
ATOM 7 C4' U B2448 59.787 121.641 112.047 1.00 35.85 C
ATOM 8 O4' U B2448 58.892 121.333 110.950 1.00 38.51 O
ATOM 9 C3' U B2448 60.801 122.632 111.486 1.00 35.02 C
ATOM 10 O3' U B2448 61.826 121.860 110.875 1.00 34.90 O
ATOM 11 C2' U B2448 60.009 123.289 110.364 1.00 35.32 C
ATOM 12 O2' U B2448 60.842 123.824 109.363 1.00 34.81 O
ATOM 13 C1' U B2448 59.283 122.069 109.812 1.00 38.38 C
ATOM 14 N1 U B2448 58.107 122.291 108.957 1.00 42.26 N
ATOM 15 C2 U B2448 58.274 122.213 107.576 1.00 43.09 C
ATOM 16 O2 U B2448 59.354 122.072 107.030 1.00 41.10 O
ATOM 17 N3 U B2448 57.116 122.323 106.855 1.00 45.62 N
ATOM 18 C4 U B2448 55.846 122.529 107.345 1.00 45.98 C
ATOM 19 O4 U B2448 54.895 122.482 106.574 1.00 49.44 O
ATOM 20 C5 U B2448 55.765 122.661 108.762 1.00 44.99 C
ATOM 21 C6 U B2448 56.866 122.538 109.502 1.00 44.11 C
ATOM 22 P C B2449 63.362 122.283 111.021 1.00 34.49 P
ATOM 23 OP1 C B2449 63.451 123.530 111.808 1.00 35.41 O
ATOM 24 OP2 C B2449 63.973 122.232 109.681 1.00 33.08 O
ATOM 25 O5' C B2449 63.967 121.091 111.882 1.00 35.86 O
TER
Atoms:
OP1: (53.714,114.838,106.893)
OP2: (53.707,114.602,109.451)
C3': (50.839,117.787,105.801)
C1': (52.828,118.553,106.772)
C5': (50.981,115.660,107.137)
O6: (58.538,119.426,108.390)
O4': (52.260,117.660,107.710)
C8: (55.204,118.359,105.926)
C2: (55.457,119.539,110.134)
C6: (57.325,119.318,108.572)
C5: (56.321,118.939,107.638)
C4: (55.005,118.917,108.045)
P: (53.041,114.392,108.144)
C4': (50.988,117.167,107.185)
C2': (52.287,118.079,105.426)
O2': (52.460,119.037,104.406)
N1: (56.785,119.599,109.821)
N2: (55.152,119.856,111.391)
N3: (54.502,119.198,109.272)
N7: (56.431,118.572,106.306)
N9: (54.282,118.585,106.916)
O5': (51.629,115.114,108.286)
O3': (50.099,118.989,105.885)
OP2: (53.707,114.602,109.451)
C3': (50.839,117.787,105.801)
C1': (52.828,118.553,106.772)
C5': (50.981,115.660,107.137)
O6: (58.538,119.426,108.390)
O4': (52.260,117.660,107.710)
C8: (55.204,118.359,105.926)
C2: (55.457,119.539,110.134)
C6: (57.325,119.318,108.572)
C5: (56.321,118.939,107.638)
C4: (55.005,118.917,108.045)
P: (53.041,114.392,108.144)
C4': (50.988,117.167,107.185)
C2': (52.287,118.079,105.426)
O2': (52.460,119.037,104.406)
N1: (56.785,119.599,109.821)
N2: (55.152,119.856,111.391)
N3: (54.502,119.198,109.272)
N7: (56.431,118.572,106.306)
N9: (54.282,118.585,106.916)
O5': (51.629,115.114,108.286)
O3': (50.099,118.989,105.885)
C4: (55.846,122.529,107.345)
N3: (57.116,122.323,106.855)
OP1: (57.402,125.393,114.130)
OP2: (56.150,123.560,112.897)
C2: (58.274,122.213,107.576)
C1': (59.283,122.069,109.812)
C3': (60.801,122.632,111.486)
O5': (58.579,123.444,113.131)
O4': (58.892,121.333,110.950)
C5': (58.992,122.072,113.260)
P: (57.235,123.971,113.799)
C4': (59.787,121.641,112.047)
C2': (60.009,123.289,110.364)
O2': (60.842,123.824,109.363)
N1: (58.107,122.291,108.957)
O4: (54.895,122.482,106.574)
O2: (59.354,122.072,107.030)
C6: (56.866,122.538,109.502)
C5: (55.765,122.661,108.762)
O3': (61.826,121.860,110.875)
N3: (57.116,122.323,106.855)
OP1: (57.402,125.393,114.130)
OP2: (56.150,123.560,112.897)
C2: (58.274,122.213,107.576)
C1': (59.283,122.069,109.812)
C3': (60.801,122.632,111.486)
O5': (58.579,123.444,113.131)
O4': (58.892,121.333,110.950)
C5': (58.992,122.072,113.260)
P: (57.235,123.971,113.799)
C4': (59.787,121.641,112.047)
C2': (60.009,123.289,110.364)
O2': (60.842,123.824,109.363)
N1: (58.107,122.291,108.957)
O4: (54.895,122.482,106.574)
O2: (59.354,122.072,107.030)
C6: (56.866,122.538,109.502)
C5: (55.765,122.661,108.762)
O3': (61.826,121.860,110.875)
Image (generated by PyMOL):