Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02103:02088
Extra
PDB:
ATOM 1 O3' G A2102 124.178 115.738 43.819 1.00 79.18 O
ATOM 2 P G A2103 124.319 114.237 43.263 1.00 80.72 P
ATOM 3 OP1 G A2103 123.901 113.310 44.348 1.00 80.89 O
ATOM 4 OP2 G A2103 125.664 114.088 42.650 1.00 81.79 O
ATOM 5 O5' G A2103 123.244 114.143 42.090 1.00 79.00 O
ATOM 6 C5' G A2103 121.839 114.083 42.380 1.00 76.16 C
ATOM 7 C4' G A2103 121.057 113.789 41.126 1.00 74.73 C
ATOM 8 O4' G A2103 121.142 114.894 40.194 1.00 74.43 O
ATOM 9 C3' G A2103 121.540 112.597 40.332 1.00 73.62 C
ATOM 10 O3' G A2103 121.041 111.409 40.916 1.00 73.77 O
ATOM 11 C2' G A2103 120.965 112.872 38.948 1.00 74.00 C
ATOM 12 O2' G A2103 119.605 112.523 38.823 1.00 72.57 O
ATOM 13 C1' G A2103 121.088 114.395 38.869 1.00 75.30 C
ATOM 14 N9 G A2103 122.273 114.854 38.156 1.00 78.07 N
ATOM 15 C8 G A2103 123.521 115.093 38.681 1.00 79.16 C
ATOM 16 N7 G A2103 124.377 115.519 37.794 1.00 80.42 N
ATOM 17 C5 G A2103 123.653 115.558 36.609 1.00 80.76 C
ATOM 18 C6 G A2103 124.047 115.945 35.302 1.00 81.46 C
ATOM 19 O6 G A2103 125.152 116.345 34.916 1.00 82.86 O
ATOM 20 N1 G A2103 122.996 115.836 34.399 1.00 80.65 N
ATOM 21 C2 G A2103 121.732 115.414 34.709 1.00 79.25 C
ATOM 22 N2 G A2103 120.864 115.393 33.700 1.00 80.05 N
ATOM 23 N3 G A2103 121.350 115.046 35.918 1.00 79.34 N
ATOM 24 C4 G A2103 122.355 115.144 36.815 1.00 79.50 C
ATOM 25 P A A2104 121.849 110.039 40.740 1.00 75.62 P
ATOM 26 OP1 A A2104 121.390 109.103 41.805 1.00 74.32 O
ATOM 27 OP2 A A2104 123.292 110.377 40.626 1.00 76.62 O
ATOM 28 O5' A A2104 121.355 109.499 39.325 1.00 74.24 O
TER
ATOM 1 O3' C B2087 129.727 112.835 32.811 1.00 88.26 O
ATOM 2 P U B2088 129.114 114.328 32.802 1.00 86.02 P
ATOM 3 OP1 U B2088 129.977 115.221 31.983 1.00 85.41 O
ATOM 4 OP2 U B2088 128.809 114.698 34.209 1.00 85.02 O
ATOM 5 O5' U B2088 127.758 114.167 31.989 1.00 83.22 O
ATOM 6 C5' U B2088 127.775 113.739 30.616 1.00 78.70 C
ATOM 7 C4' U B2088 126.390 113.828 30.032 1.00 75.59 C
ATOM 8 O4' U B2088 125.501 112.962 30.793 1.00 75.39 O
ATOM 9 C3' U B2088 125.756 115.213 30.077 1.00 73.70 C
ATOM 10 O3' U B2088 124.869 115.285 28.972 1.00 72.43 O
ATOM 11 C2' U B2088 124.992 115.170 31.396 1.00 73.33 C
ATOM 12 O2' U B2088 123.927 116.085 31.508 1.00 72.12 O
ATOM 13 C1' U B2088 124.470 113.737 31.377 1.00 74.31 C
ATOM 14 N1 U B2088 124.154 113.195 32.707 1.00 74.34 N
ATOM 15 C2 U B2088 122.849 112.813 32.945 1.00 73.70 C
ATOM 16 O2 U B2088 121.976 112.872 32.098 1.00 72.49 O
ATOM 17 N3 U B2088 122.604 112.351 34.214 1.00 74.45 N
ATOM 18 C4 U B2088 123.513 112.228 35.245 1.00 75.82 C
ATOM 19 O4 U B2088 123.129 111.839 36.351 1.00 76.20 O
ATOM 20 C5 U B2088 124.845 112.623 34.914 1.00 75.34 C
ATOM 21 C6 U B2088 125.114 113.080 33.689 1.00 74.87 C
ATOM 22 P C B2089 124.294 116.701 28.479 1.00 71.93 P
ATOM 23 OP1 C B2089 125.138 117.184 27.367 1.00 73.75 O
ATOM 24 OP2 C B2089 124.075 117.576 29.655 1.00 72.36 O
ATOM 25 O5' C B2089 122.888 116.274 27.863 1.00 72.30 O
TER
ATOM 2 P G A2103 124.319 114.237 43.263 1.00 80.72 P
ATOM 3 OP1 G A2103 123.901 113.310 44.348 1.00 80.89 O
ATOM 4 OP2 G A2103 125.664 114.088 42.650 1.00 81.79 O
ATOM 5 O5' G A2103 123.244 114.143 42.090 1.00 79.00 O
ATOM 6 C5' G A2103 121.839 114.083 42.380 1.00 76.16 C
ATOM 7 C4' G A2103 121.057 113.789 41.126 1.00 74.73 C
ATOM 8 O4' G A2103 121.142 114.894 40.194 1.00 74.43 O
ATOM 9 C3' G A2103 121.540 112.597 40.332 1.00 73.62 C
ATOM 10 O3' G A2103 121.041 111.409 40.916 1.00 73.77 O
ATOM 11 C2' G A2103 120.965 112.872 38.948 1.00 74.00 C
ATOM 12 O2' G A2103 119.605 112.523 38.823 1.00 72.57 O
ATOM 13 C1' G A2103 121.088 114.395 38.869 1.00 75.30 C
ATOM 14 N9 G A2103 122.273 114.854 38.156 1.00 78.07 N
ATOM 15 C8 G A2103 123.521 115.093 38.681 1.00 79.16 C
ATOM 16 N7 G A2103 124.377 115.519 37.794 1.00 80.42 N
ATOM 17 C5 G A2103 123.653 115.558 36.609 1.00 80.76 C
ATOM 18 C6 G A2103 124.047 115.945 35.302 1.00 81.46 C
ATOM 19 O6 G A2103 125.152 116.345 34.916 1.00 82.86 O
ATOM 20 N1 G A2103 122.996 115.836 34.399 1.00 80.65 N
ATOM 21 C2 G A2103 121.732 115.414 34.709 1.00 79.25 C
ATOM 22 N2 G A2103 120.864 115.393 33.700 1.00 80.05 N
ATOM 23 N3 G A2103 121.350 115.046 35.918 1.00 79.34 N
ATOM 24 C4 G A2103 122.355 115.144 36.815 1.00 79.50 C
ATOM 25 P A A2104 121.849 110.039 40.740 1.00 75.62 P
ATOM 26 OP1 A A2104 121.390 109.103 41.805 1.00 74.32 O
ATOM 27 OP2 A A2104 123.292 110.377 40.626 1.00 76.62 O
ATOM 28 O5' A A2104 121.355 109.499 39.325 1.00 74.24 O
TER
ATOM 1 O3' C B2087 129.727 112.835 32.811 1.00 88.26 O
ATOM 2 P U B2088 129.114 114.328 32.802 1.00 86.02 P
ATOM 3 OP1 U B2088 129.977 115.221 31.983 1.00 85.41 O
ATOM 4 OP2 U B2088 128.809 114.698 34.209 1.00 85.02 O
ATOM 5 O5' U B2088 127.758 114.167 31.989 1.00 83.22 O
ATOM 6 C5' U B2088 127.775 113.739 30.616 1.00 78.70 C
ATOM 7 C4' U B2088 126.390 113.828 30.032 1.00 75.59 C
ATOM 8 O4' U B2088 125.501 112.962 30.793 1.00 75.39 O
ATOM 9 C3' U B2088 125.756 115.213 30.077 1.00 73.70 C
ATOM 10 O3' U B2088 124.869 115.285 28.972 1.00 72.43 O
ATOM 11 C2' U B2088 124.992 115.170 31.396 1.00 73.33 C
ATOM 12 O2' U B2088 123.927 116.085 31.508 1.00 72.12 O
ATOM 13 C1' U B2088 124.470 113.737 31.377 1.00 74.31 C
ATOM 14 N1 U B2088 124.154 113.195 32.707 1.00 74.34 N
ATOM 15 C2 U B2088 122.849 112.813 32.945 1.00 73.70 C
ATOM 16 O2 U B2088 121.976 112.872 32.098 1.00 72.49 O
ATOM 17 N3 U B2088 122.604 112.351 34.214 1.00 74.45 N
ATOM 18 C4 U B2088 123.513 112.228 35.245 1.00 75.82 C
ATOM 19 O4 U B2088 123.129 111.839 36.351 1.00 76.20 O
ATOM 20 C5 U B2088 124.845 112.623 34.914 1.00 75.34 C
ATOM 21 C6 U B2088 125.114 113.080 33.689 1.00 74.87 C
ATOM 22 P C B2089 124.294 116.701 28.479 1.00 71.93 P
ATOM 23 OP1 C B2089 125.138 117.184 27.367 1.00 73.75 O
ATOM 24 OP2 C B2089 124.075 117.576 29.655 1.00 72.36 O
ATOM 25 O5' C B2089 122.888 116.274 27.863 1.00 72.30 O
TER
Atoms:
OP1: (123.901,113.310,44.348)
OP2: (125.664,114.088,42.650)
C3': (121.540,112.597,40.332)
C1': (121.088,114.395,38.869)
C5': (121.839,114.083,42.380)
O6: (125.152,116.345,34.916)
O4': (121.142,114.894,40.194)
C8: (123.521,115.093,38.681)
C2: (121.732,115.414,34.709)
C6: (124.047,115.945,35.302)
C5: (123.653,115.558,36.609)
C4: (122.355,115.144,36.815)
P: (124.319,114.237,43.263)
C4': (121.057,113.789,41.126)
C2': (120.965,112.872,38.948)
O2': (119.605,112.523,38.823)
N1: (122.996,115.836,34.399)
N2: (120.864,115.393,33.700)
N3: (121.350,115.046,35.918)
N7: (124.377,115.519,37.794)
N9: (122.273,114.854,38.156)
O5': (123.244,114.143,42.090)
O3': (121.041,111.409,40.916)
OP2: (125.664,114.088,42.650)
C3': (121.540,112.597,40.332)
C1': (121.088,114.395,38.869)
C5': (121.839,114.083,42.380)
O6: (125.152,116.345,34.916)
O4': (121.142,114.894,40.194)
C8: (123.521,115.093,38.681)
C2: (121.732,115.414,34.709)
C6: (124.047,115.945,35.302)
C5: (123.653,115.558,36.609)
C4: (122.355,115.144,36.815)
P: (124.319,114.237,43.263)
C4': (121.057,113.789,41.126)
C2': (120.965,112.872,38.948)
O2': (119.605,112.523,38.823)
N1: (122.996,115.836,34.399)
N2: (120.864,115.393,33.700)
N3: (121.350,115.046,35.918)
N7: (124.377,115.519,37.794)
N9: (122.273,114.854,38.156)
O5': (123.244,114.143,42.090)
O3': (121.041,111.409,40.916)
C4: (123.513,112.228,35.245)
N3: (122.604,112.351,34.214)
OP1: (129.977,115.221,31.983)
OP2: (128.809,114.698,34.209)
C2: (122.849,112.813,32.945)
C1': (124.470,113.737,31.377)
C3': (125.756,115.213,30.077)
O5': (127.758,114.167,31.989)
O4': (125.501,112.962,30.793)
C5': (127.775,113.739,30.616)
P: (129.114,114.328,32.802)
C4': (126.390,113.828,30.032)
C2': (124.992,115.170,31.396)
O2': (123.927,116.085,31.508)
N1: (124.154,113.195,32.707)
O4: (123.129,111.839,36.351)
O2: (121.976,112.872,32.098)
C6: (125.114,113.080,33.689)
C5: (124.845,112.623,34.914)
O3': (124.869,115.285,28.972)
N3: (122.604,112.351,34.214)
OP1: (129.977,115.221,31.983)
OP2: (128.809,114.698,34.209)
C2: (122.849,112.813,32.945)
C1': (124.470,113.737,31.377)
C3': (125.756,115.213,30.077)
O5': (127.758,114.167,31.989)
O4': (125.501,112.962,30.793)
C5': (127.775,113.739,30.616)
P: (129.114,114.328,32.802)
C4': (126.390,113.828,30.032)
C2': (124.992,115.170,31.396)
O2': (123.927,116.085,31.508)
N1: (124.154,113.195,32.707)
O4: (123.129,111.839,36.351)
O2: (121.976,112.872,32.098)
C6: (125.114,113.080,33.689)
C5: (124.845,112.623,34.914)
O3': (124.869,115.285,28.972)
Image (generated by PyMOL):