Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02019:02448
Extra
PDB:
ATOM 1 O3' G A2018 52.408 112.434 107.698 1.00 42.44 O
ATOM 2 P G A2019 52.754 114.000 107.873 1.00 42.83 P
ATOM 3 OP1 G A2019 53.551 114.436 106.694 1.00 40.33 O
ATOM 4 OP2 G A2019 53.295 114.198 109.240 1.00 43.11 O
ATOM 5 O5' G A2019 51.344 114.743 107.850 1.00 39.96 O
ATOM 6 C5' G A2019 50.833 115.273 106.628 1.00 38.60 C
ATOM 7 C4' G A2019 50.842 116.778 106.660 1.00 36.31 C
ATOM 8 O4' G A2019 52.110 117.271 107.198 1.00 37.94 O
ATOM 9 C3' G A2019 50.698 117.408 105.282 1.00 34.70 C
ATOM 10 O3' G A2019 49.927 118.589 105.392 1.00 32.46 O
ATOM 11 C2' G A2019 52.145 117.748 104.930 1.00 35.93 C
ATOM 12 O2' G A2019 52.308 118.774 103.973 1.00 37.11 O
ATOM 13 C1' G A2019 52.670 118.193 106.289 1.00 36.20 C
ATOM 14 N9 G A2019 54.125 118.223 106.438 1.00 36.65 N
ATOM 15 C8 G A2019 55.062 117.954 105.470 1.00 37.96 C
ATOM 16 N7 G A2019 56.288 118.147 105.871 1.00 37.90 N
ATOM 17 C5 G A2019 56.156 118.550 107.190 1.00 37.46 C
ATOM 18 C6 G A2019 57.144 118.916 108.137 1.00 37.95 C
ATOM 19 O6 G A2019 58.370 118.972 107.989 1.00 37.33 O
ATOM 20 N1 G A2019 56.580 119.252 109.362 1.00 37.31 N
ATOM 21 C2 G A2019 55.239 119.241 109.640 1.00 36.48 C
ATOM 22 N2 G A2019 54.900 119.599 110.881 1.00 35.20 N
ATOM 23 N3 G A2019 54.304 118.906 108.765 1.00 37.27 N
ATOM 24 C4 G A2019 54.830 118.577 107.566 1.00 37.09 C
ATOM 25 P A A2020 48.354 118.535 105.101 1.00 31.48 P
ATOM 26 OP1 A A2020 47.725 118.008 106.344 1.00 29.25 O
ATOM 27 OP2 A A2020 48.122 117.844 103.816 1.00 30.70 O
ATOM 28 O5' A A2020 47.953 120.061 104.889 1.00 30.70 O
TER
ATOM 1 O3' G B2447 56.794 122.706 114.693 1.00 24.02 O
ATOM 2 P U B2448 56.961 123.487 113.300 1.00 25.81 P
ATOM 3 OP1 U B2448 56.909 124.938 113.563 1.00 24.84 O
ATOM 4 OP2 U B2448 56.006 122.883 112.347 1.00 26.47 O
ATOM 5 O5' U B2448 58.394 123.066 112.765 1.00 26.52 O
ATOM 6 C5' U B2448 58.835 121.700 112.862 1.00 29.00 C
ATOM 7 C4' U B2448 59.521 121.269 111.587 1.00 29.54 C
ATOM 8 O4' U B2448 58.537 121.046 110.542 1.00 30.41 O
ATOM 9 C3' U B2448 60.542 122.240 110.997 1.00 29.03 C
ATOM 10 O3' U B2448 61.543 121.452 110.375 1.00 28.54 O
ATOM 11 C2' U B2448 59.735 122.924 109.898 1.00 30.85 C
ATOM 12 O2' U B2448 60.534 123.475 108.870 1.00 30.27 O
ATOM 13 C1' U B2448 58.953 121.725 109.379 1.00 32.27 C
ATOM 14 N1 U B2448 57.794 121.956 108.508 1.00 34.84 N
ATOM 15 C2 U B2448 57.964 121.754 107.141 1.00 35.76 C
ATOM 16 O2 U B2448 59.045 121.504 106.626 1.00 33.61 O
ATOM 17 N3 U B2448 56.818 121.861 106.399 1.00 37.70 N
ATOM 18 C4 U B2448 55.554 122.167 106.861 1.00 39.28 C
ATOM 19 O4 U B2448 54.601 122.098 106.089 1.00 42.15 O
ATOM 20 C5 U B2448 55.476 122.429 108.265 1.00 38.99 C
ATOM 21 C6 U B2448 56.572 122.316 109.022 1.00 36.99 C
ATOM 22 P C B2449 63.083 121.869 110.488 1.00 29.69 P
ATOM 23 OP1 C B2449 63.174 123.085 111.334 1.00 29.61 O
ATOM 24 OP2 C B2449 63.650 121.884 109.120 1.00 28.04 O
ATOM 25 O5' C B2449 63.736 120.652 111.280 1.00 29.10 O
TER
ATOM 2 P G A2019 52.754 114.000 107.873 1.00 42.83 P
ATOM 3 OP1 G A2019 53.551 114.436 106.694 1.00 40.33 O
ATOM 4 OP2 G A2019 53.295 114.198 109.240 1.00 43.11 O
ATOM 5 O5' G A2019 51.344 114.743 107.850 1.00 39.96 O
ATOM 6 C5' G A2019 50.833 115.273 106.628 1.00 38.60 C
ATOM 7 C4' G A2019 50.842 116.778 106.660 1.00 36.31 C
ATOM 8 O4' G A2019 52.110 117.271 107.198 1.00 37.94 O
ATOM 9 C3' G A2019 50.698 117.408 105.282 1.00 34.70 C
ATOM 10 O3' G A2019 49.927 118.589 105.392 1.00 32.46 O
ATOM 11 C2' G A2019 52.145 117.748 104.930 1.00 35.93 C
ATOM 12 O2' G A2019 52.308 118.774 103.973 1.00 37.11 O
ATOM 13 C1' G A2019 52.670 118.193 106.289 1.00 36.20 C
ATOM 14 N9 G A2019 54.125 118.223 106.438 1.00 36.65 N
ATOM 15 C8 G A2019 55.062 117.954 105.470 1.00 37.96 C
ATOM 16 N7 G A2019 56.288 118.147 105.871 1.00 37.90 N
ATOM 17 C5 G A2019 56.156 118.550 107.190 1.00 37.46 C
ATOM 18 C6 G A2019 57.144 118.916 108.137 1.00 37.95 C
ATOM 19 O6 G A2019 58.370 118.972 107.989 1.00 37.33 O
ATOM 20 N1 G A2019 56.580 119.252 109.362 1.00 37.31 N
ATOM 21 C2 G A2019 55.239 119.241 109.640 1.00 36.48 C
ATOM 22 N2 G A2019 54.900 119.599 110.881 1.00 35.20 N
ATOM 23 N3 G A2019 54.304 118.906 108.765 1.00 37.27 N
ATOM 24 C4 G A2019 54.830 118.577 107.566 1.00 37.09 C
ATOM 25 P A A2020 48.354 118.535 105.101 1.00 31.48 P
ATOM 26 OP1 A A2020 47.725 118.008 106.344 1.00 29.25 O
ATOM 27 OP2 A A2020 48.122 117.844 103.816 1.00 30.70 O
ATOM 28 O5' A A2020 47.953 120.061 104.889 1.00 30.70 O
TER
ATOM 1 O3' G B2447 56.794 122.706 114.693 1.00 24.02 O
ATOM 2 P U B2448 56.961 123.487 113.300 1.00 25.81 P
ATOM 3 OP1 U B2448 56.909 124.938 113.563 1.00 24.84 O
ATOM 4 OP2 U B2448 56.006 122.883 112.347 1.00 26.47 O
ATOM 5 O5' U B2448 58.394 123.066 112.765 1.00 26.52 O
ATOM 6 C5' U B2448 58.835 121.700 112.862 1.00 29.00 C
ATOM 7 C4' U B2448 59.521 121.269 111.587 1.00 29.54 C
ATOM 8 O4' U B2448 58.537 121.046 110.542 1.00 30.41 O
ATOM 9 C3' U B2448 60.542 122.240 110.997 1.00 29.03 C
ATOM 10 O3' U B2448 61.543 121.452 110.375 1.00 28.54 O
ATOM 11 C2' U B2448 59.735 122.924 109.898 1.00 30.85 C
ATOM 12 O2' U B2448 60.534 123.475 108.870 1.00 30.27 O
ATOM 13 C1' U B2448 58.953 121.725 109.379 1.00 32.27 C
ATOM 14 N1 U B2448 57.794 121.956 108.508 1.00 34.84 N
ATOM 15 C2 U B2448 57.964 121.754 107.141 1.00 35.76 C
ATOM 16 O2 U B2448 59.045 121.504 106.626 1.00 33.61 O
ATOM 17 N3 U B2448 56.818 121.861 106.399 1.00 37.70 N
ATOM 18 C4 U B2448 55.554 122.167 106.861 1.00 39.28 C
ATOM 19 O4 U B2448 54.601 122.098 106.089 1.00 42.15 O
ATOM 20 C5 U B2448 55.476 122.429 108.265 1.00 38.99 C
ATOM 21 C6 U B2448 56.572 122.316 109.022 1.00 36.99 C
ATOM 22 P C B2449 63.083 121.869 110.488 1.00 29.69 P
ATOM 23 OP1 C B2449 63.174 123.085 111.334 1.00 29.61 O
ATOM 24 OP2 C B2449 63.650 121.884 109.120 1.00 28.04 O
ATOM 25 O5' C B2449 63.736 120.652 111.280 1.00 29.10 O
TER
Atoms:
OP1: (53.551,114.436,106.694)
OP2: (53.295,114.198,109.240)
C3': (50.698,117.408,105.282)
C1': (52.670,118.193,106.289)
C5': (50.833,115.273,106.628)
O6: (58.370,118.972,107.989)
O4': (52.110,117.271,107.198)
C8: (55.062,117.954,105.470)
C2: (55.239,119.241,109.640)
C6: (57.144,118.916,108.137)
C5: (56.156,118.550,107.190)
C4: (54.830,118.577,107.566)
P: (52.754,114.000,107.873)
C4': (50.842,116.778,106.660)
C2': (52.145,117.748,104.930)
O2': (52.308,118.774,103.973)
N1: (56.580,119.252,109.362)
N2: (54.900,119.599,110.881)
N3: (54.304,118.906,108.765)
N7: (56.288,118.147,105.871)
N9: (54.125,118.223,106.438)
O5': (51.344,114.743,107.850)
O3': (49.927,118.589,105.392)
OP2: (53.295,114.198,109.240)
C3': (50.698,117.408,105.282)
C1': (52.670,118.193,106.289)
C5': (50.833,115.273,106.628)
O6: (58.370,118.972,107.989)
O4': (52.110,117.271,107.198)
C8: (55.062,117.954,105.470)
C2: (55.239,119.241,109.640)
C6: (57.144,118.916,108.137)
C5: (56.156,118.550,107.190)
C4: (54.830,118.577,107.566)
P: (52.754,114.000,107.873)
C4': (50.842,116.778,106.660)
C2': (52.145,117.748,104.930)
O2': (52.308,118.774,103.973)
N1: (56.580,119.252,109.362)
N2: (54.900,119.599,110.881)
N3: (54.304,118.906,108.765)
N7: (56.288,118.147,105.871)
N9: (54.125,118.223,106.438)
O5': (51.344,114.743,107.850)
O3': (49.927,118.589,105.392)
C4: (55.554,122.167,106.861)
N3: (56.818,121.861,106.399)
OP1: (56.909,124.938,113.563)
OP2: (56.006,122.883,112.347)
C2: (57.964,121.754,107.141)
C1': (58.953,121.725,109.379)
C3': (60.542,122.240,110.997)
O5': (58.394,123.066,112.765)
O4': (58.537,121.046,110.542)
C5': (58.835,121.700,112.862)
P: (56.961,123.487,113.300)
C4': (59.521,121.269,111.587)
C2': (59.735,122.924,109.898)
O2': (60.534,123.475,108.870)
N1: (57.794,121.956,108.508)
O4: (54.601,122.098,106.089)
O2: (59.045,121.504,106.626)
C6: (56.572,122.316,109.022)
C5: (55.476,122.429,108.265)
O3': (61.543,121.452,110.375)
N3: (56.818,121.861,106.399)
OP1: (56.909,124.938,113.563)
OP2: (56.006,122.883,112.347)
C2: (57.964,121.754,107.141)
C1': (58.953,121.725,109.379)
C3': (60.542,122.240,110.997)
O5': (58.394,123.066,112.765)
O4': (58.537,121.046,110.542)
C5': (58.835,121.700,112.862)
P: (56.961,123.487,113.300)
C4': (59.521,121.269,111.587)
C2': (59.735,122.924,109.898)
O2': (60.534,123.475,108.870)
N1: (57.794,121.956,108.508)
O4: (54.601,122.098,106.089)
O2: (59.045,121.504,106.626)
C6: (56.572,122.316,109.022)
C5: (55.476,122.429,108.265)
O3': (61.543,121.452,110.375)
Image (generated by PyMOL):